Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav18A0A075B656 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav18A0A075B656 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.19
Trav18A0A075B656 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav18A0A075B656 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav18A0A075B656 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav18A0A075B656 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav18A0A075B656 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.83□□□□□ -0.2
Trav18A0A075B656 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav18A0A075B656 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Gm12527-201ENSMUST00000117967 564 ntBASIC13.82□□□□□ -0.2
Trav18A0A075B656 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav18A0A075B656 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.82□□□□□ -0.2
Trav18A0A075B656 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.82□□□□□ -0.2
Trav18A0A075B656 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav18A0A075B656 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trav18A0A075B656 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.8□□□□□ -0.2
Trav18A0A075B656 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.8□□□□□ -0.2
Trav18A0A075B656 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms