Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Gm38285-201ENSMUST00000192928 922 ntBASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav14n-3A0A075B645 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav14n-3A0A075B645 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav14n-3A0A075B645 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Gm6139-201ENSMUST00000079261 882 ntBASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav14n-3A0A075B645 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav14n-3A0A075B645 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms