Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Rps4l-201ENSMUST00000071745 943 ntBASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav8n-2A0A075B633 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Gm44450-201ENSMUST00000199528 114 ntBASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Gm18421-201ENSMUST00000204122 625 ntBASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav8n-2A0A075B633 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Gm13312-201ENSMUST00000119631 718 ntBASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 AW822252-206ENSMUST00000208904 237 ntBASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8n-2A0A075B633 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8n-2A0A075B633 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trav8n-2A0A075B633 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms