Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-1A0A075B606 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav13d-1A0A075B606 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trav13d-1A0A075B606 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-1A0A075B606 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-1A0A075B606 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gm10013-201ENSMUST00000106074 672 ntBASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gm37025-201ENSMUST00000195159 829 ntBASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gm7791-201ENSMUST00000219066 539 ntBASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-1A0A075B606 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Gm18101-201ENSMUST00000215769 548 ntBASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms