Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm21814-202ENSMUST00000203277 873 ntBASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav1A0A075B5Z4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav1A0A075B5Z4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav1A0A075B5Z4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav1A0A075B5Z4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav1A0A075B5Z4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms