Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm23637-201ENSMUST00000175075 94 ntBASIC-2,4□□□□□ -2,79
Ushbp1Q8R370 Gm22593-201ENSMUST00000104245 109 ntBASIC-2,41□□□□□ -2,8
Ushbp1Q8R370 Gm23066-201ENSMUST00000158237 71 ntBASIC-2,44□□□□□ -2,8
Ushbp1Q8R370 Gm25886-201ENSMUST00000157780 114 ntBASIC-2,45□□□□□ -2,8
Ushbp1Q8R370 Gm26231-201ENSMUST00000175218 67 ntBASIC-2,45□□□□□ -2,8
Ushbp1Q8R370 Gm25049-201ENSMUST00000158597 73 ntBASIC-2,47□□□□□ -2,8
Ushbp1Q8R370 Mir1912-201ENSMUST00000175298 87 ntBASIC-2,49□□□□□ -2,81
Ushbp1Q8R370 Mir335-201ENSMUST00000083567 98 ntBASIC-2,51□□□□□ -2,81
Ushbp1Q8R370 Mir6395-201ENSMUST00000183885 91 ntBASIC-2,52□□□□□ -2,81
Ushbp1Q8R370 Gm27995-201ENSMUST00000184402 100 ntBASIC-2,52□□□□□ -2,81
Ushbp1Q8R370 Gm25867-201ENSMUST00000158254 103 ntBASIC-2,53□□□□□ -2,81
Ushbp1Q8R370 Gm24538-201ENSMUST00000082612 107 ntBASIC-2,58□□□□□ -2,82
Ushbp1Q8R370 Gm27882-201ENSMUST00000184904 74 ntBASIC-2,6□□□□□ -2,83
Ushbp1Q8R370 Gm26307-201ENSMUST00000157767 126 ntBASIC-2,62□□□□□ -2,83
Ushbp1Q8R370 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2,62□□□□□ -2,83
Ushbp1Q8R370 Gm25521-201ENSMUST00000158393 108 ntBASIC-2,67□□□□□ -2,84
Ushbp1Q8R370 Gm26008-201ENSMUST00000158797 99 ntBASIC-2,67□□□□□ -2,84
Ushbp1Q8R370 Mir154-201ENSMUST00000083514 66 ntBASIC-2,72□□□□□ -2,84
Ushbp1Q8R370 Mir351-201ENSMUST00000083569 99 ntBASIC-2,76□□□□□ -2,85
Ushbp1Q8R370 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2,79□□□□□ -2,86
Ushbp1Q8R370 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2,79□□□□□ -2,86
Ushbp1Q8R370 Gm25297-201ENSMUST00000175490 67 ntBASIC-2,83□□□□□ -2,86
Ushbp1Q8R370 Mir2136-201ENSMUST00000158781 75 ntBASIC-2,86□□□□□ -2,87
Ushbp1Q8R370 Gm25254-201ENSMUST00000157239 104 ntBASIC-2,93□□□□□ -2,88
Ushbp1Q8R370 Gm27671-201ENSMUST00000183739 66 ntBASIC-2,99□□□□□ -2,89
Ushbp1Q8R370 Gm23676-201ENSMUST00000157314 105 ntBASIC-3,09□□□□□ -2,9
Ushbp1Q8R370 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3,17□□□□□ -2,92
Ushbp1Q8R370 Gm23210-201ENSMUST00000158668 98 ntBASIC-3,28□□□□□ -2,93
Ushbp1Q8R370 Gm23125-201ENSMUST00000157651 106 ntBASIC-3,36□□□□□ -2,95
Ushbp1Q8R370 Gm25039-201ENSMUST00000082933 107 ntBASIC-3,75□□□□□ -3,01
Ushbp1Q8R370 Gm23248-201ENSMUST00000083367 108 ntBASIC-3,78□□□□□ -3,01
Ushbp1Q8R370 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3,86□□□□□ -3,03
Retrieved 32 of 76,532 protein–RNA pairs in 125 ms