Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir7670-201ENSMUST00000183689 69 ntBASIC-1,36□□□□□ -2,63
Trim47Q8C0E3 Gm22566-201ENSMUST00000175541 85 ntBASIC-1,41□□□□□ -2,64
Trim47Q8C0E3 Mir466o-201ENSMUST00000104832 84 ntBASIC-1,43□□□□□ -2,64
Trim47Q8C0E3 Gm23248-201ENSMUST00000083367 108 ntBASIC-1,43□□□□□ -2,64
Trim47Q8C0E3 Mir470-201ENSMUST00000093565 75 ntBASIC-1,43□□□□□ -2,64
Trim47Q8C0E3 Gm25905-201ENSMUST00000158490 101 ntBASIC-1,46□□□□□ -2,64
Trim47Q8C0E3 Mir6395-201ENSMUST00000183885 91 ntBASIC-1,56□□□□□ -2,66
Trim47Q8C0E3 Gm23751-201ENSMUST00000157583 136 ntBASIC-1,57□□□□□ -2,66
Trim47Q8C0E3 Gm26231-201ENSMUST00000175218 67 ntBASIC-1,58□□□□□ -2,66
Trim47Q8C0E3 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1,59□□□□□ -2,66
Trim47Q8C0E3 Mir154-201ENSMUST00000083514 66 ntBASIC-1,63□□□□□ -2,67
Trim47Q8C0E3 Mir485-201ENSMUST00000093620 73 ntBASIC-1,73□□□□□ -2,69
Trim47Q8C0E3 Gm44377-201ENSMUST00000199039 87 ntBASIC-1,77□□□□□ -2,69
Trim47Q8C0E3 Gm26307-201ENSMUST00000157767 126 ntBASIC-1,78□□□□□ -2,69
Trim47Q8C0E3 Gm23637-201ENSMUST00000175075 94 ntBASIC-1,78□□□□□ -2,69
Trim47Q8C0E3 Mir467e-201ENSMUST00000103760 87 ntBASIC-1,82□□□□□ -2,7
Trim47Q8C0E3 Gm44351-201ENSMUST00000200090 95 ntBASIC-1,83□□□□□ -2,7
Trim47Q8C0E3 Gm25039-201ENSMUST00000082933 107 ntBASIC-1,84□□□□□ -2,7
Trim47Q8C0E3 Mir335-201ENSMUST00000083567 98 ntBASIC-1,84□□□□□ -2,7
Trim47Q8C0E3 Gm22402-201ENSMUST00000174920 110 ntBASIC-1,86□□□□□ -2,71
Trim47Q8C0E3 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1,89□□□□□ -2,71
Trim47Q8C0E3 Mir351-201ENSMUST00000083569 99 ntBASIC-2□□□□□ -2,73
Trim47Q8C0E3 Gm23210-201ENSMUST00000158668 98 ntBASIC-2,02□□□□□ -2,73
Trim47Q8C0E3 Gm23566-201ENSMUST00000174907 108 ntBASIC-2,02□□□□□ -2,73
Trim47Q8C0E3 Gm22183-201ENSMUST00000175420 73 ntBASIC-2,03□□□□□ -2,73
Trim47Q8C0E3 Gm27995-201ENSMUST00000184402 100 ntBASIC-2,03□□□□□ -2,73
Trim47Q8C0E3 Gm24538-201ENSMUST00000082612 107 ntBASIC-2,07□□□□□ -2,74
Trim47Q8C0E3 Gm25297-201ENSMUST00000175490 67 ntBASIC-2,21□□□□□ -2,76
Trim47Q8C0E3 Gm23676-201ENSMUST00000157314 105 ntBASIC-2,26□□□□□ -2,77
Trim47Q8C0E3 Mir2136-201ENSMUST00000158781 75 ntBASIC-2,4□□□□□ -2,79
Trim47Q8C0E3 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2,67□□□□□ -2,84
Trim47Q8C0E3 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2,74□□□□□ -2,85
Retrieved 32 of 76,532 protein–RNA pairs in 84,1 ms