Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.01□□□□□ -2.57
Trim35Q8C006 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.05□□□□□ -2.58
Trim35Q8C006 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.05□□□□□ -2.58
Trim35Q8C006 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.09□□□□□ -2.58
Trim35Q8C006 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.13□□□□□ -2.59
Trim35Q8C006 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.14□□□□□ -2.59
Trim35Q8C006 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
Trim35Q8C006 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.17□□□□□ -2.6
Trim35Q8C006 Gm23210-201ENSMUST00000158668 98 ntBASIC-1.18□□□□□ -2.6
Trim35Q8C006 Mir485-201ENSMUST00000093620 73 ntBASIC-1.25□□□□□ -2.61
Trim35Q8C006 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
Trim35Q8C006 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.3□□□□□ -2.62
Trim35Q8C006 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.31□□□□□ -2.62
Trim35Q8C006 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.31□□□□□ -2.62
Trim35Q8C006 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.36□□□□□ -2.63
Trim35Q8C006 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.42□□□□□ -2.64
Trim35Q8C006 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.47□□□□□ -2.64
Trim35Q8C006 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.5□□□□□ -2.65
Trim35Q8C006 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.5□□□□□ -2.65
Trim35Q8C006 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.53□□□□□ -2.65
Trim35Q8C006 Mir335-201ENSMUST00000083567 98 ntBASIC-1.54□□□□□ -2.66
Trim35Q8C006 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.58□□□□□ -2.66
Trim35Q8C006 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.6□□□□□ -2.67
Trim35Q8C006 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.6□□□□□ -2.67
Trim35Q8C006 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.65□□□□□ -2.67
Trim35Q8C006 Mir351-201ENSMUST00000083569 99 ntBASIC-1.67□□□□□ -2.68
Trim35Q8C006 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.69□□□□□ -2.68
Trim35Q8C006 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.71□□□□□ -2.68
Trim35Q8C006 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.8□□□□□ -2.7
Trim35Q8C006 n-R5s214-201ENSMUST00000122494 121 ntBASIC-1.97□□□□□ -2.72
Trim35Q8C006 Mir2136-201ENSMUST00000158781 75 ntBASIC-2□□□□□ -2.73
Trim35Q8C006 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.21□□□□□ -2.76
Retrieved 32 of 76,532 protein–RNA pairs in 3 ms