Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.27□□□□□ -2.61
Trim28Q62318 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.28□□□□□ -2.61
Trim28Q62318 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.29□□□□□ -2.62
Trim28Q62318 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.32□□□□□ -2.62
Trim28Q62318 Mir485-201ENSMUST00000093620 73 ntBASIC-1.35□□□□□ -2.63
Trim28Q62318 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.36□□□□□ -2.63
Trim28Q62318 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.38□□□□□ -2.63
Trim28Q62318 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.39□□□□□ -2.63
Trim28Q62318 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.39□□□□□ -2.63
Trim28Q62318 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.46□□□□□ -2.64
Trim28Q62318 Mir154-201ENSMUST00000083514 66 ntBASIC-1.47□□□□□ -2.64
Trim28Q62318 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.49□□□□□ -2.65
Trim28Q62318 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.52□□□□□ -2.65
Trim28Q62318 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.56□□□□□ -2.66
Trim28Q62318 Gm23248-201ENSMUST00000083367 108 ntBASIC-1.57□□□□□ -2.66
Trim28Q62318 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.6□□□□□ -2.67
Trim28Q62318 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.61□□□□□ -2.67
Trim28Q62318 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.61□□□□□ -2.67
Trim28Q62318 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.63□□□□□ -2.67
Trim28Q62318 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.65□□□□□ -2.67
Trim28Q62318 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.67□□□□□ -2.68
Trim28Q62318 Gm23210-201ENSMUST00000158668 98 ntBASIC-1.71□□□□□ -2.68
Trim28Q62318 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.73□□□□□ -2.69
Trim28Q62318 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.77□□□□□ -2.69
Trim28Q62318 Gm25039-201ENSMUST00000082933 107 ntBASIC-1.79□□□□□ -2.7
Trim28Q62318 Mir335-201ENSMUST00000083567 98 ntBASIC-1.8□□□□□ -2.7
Trim28Q62318 Mir351-201ENSMUST00000083569 99 ntBASIC-1.94□□□□□ -2.72
Trim28Q62318 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.95□□□□□ -2.72
Trim28Q62318 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.99□□□□□ -2.73
Trim28Q62318 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.02□□□□□ -2.73
Trim28Q62318 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.04□□□□□ -2.74
Trim28Q62318 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2.29□□□□□ -2.78
Retrieved 32 of 76,532 protein–RNA pairs in 6.7 ms