Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1,16□□□□□ -2,6
Col28a1Q2UY11 Gm22402-201ENSMUST00000174920 110 ntBASIC-1,16□□□□□ -2,6
Col28a1Q2UY11 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1,17□□□□□ -2,6
Col28a1Q2UY11 Mir493-201ENSMUST00000103837 83 ntBASIC-1,18□□□□□ -2,6
Col28a1Q2UY11 Gm24016-201ENSMUST00000157726 68 ntBASIC-1,19□□□□□ -2,6
Col28a1Q2UY11 Gm27995-201ENSMUST00000184402 100 ntBASIC-1,2□□□□□ -2,6
Col28a1Q2UY11 Gm25521-201ENSMUST00000158393 108 ntBASIC-1,22□□□□□ -2,6
Col28a1Q2UY11 Gm23707-201ENSMUST00000104366 125 ntBASIC-1,23□□□□□ -2,61
Col28a1Q2UY11 Gm25867-201ENSMUST00000158254 103 ntBASIC-1,24□□□□□ -2,61
Col28a1Q2UY11 Mir7670-201ENSMUST00000183689 69 ntBASIC-1,24□□□□□ -2,61
Col28a1Q2UY11 Gm23676-201ENSMUST00000157314 105 ntBASIC-1,26□□□□□ -2,61
Col28a1Q2UY11 Gm24185-201ENSMUST00000122578 105 ntBASIC-1,28□□□□□ -2,61
Col28a1Q2UY11 Gm24631-201ENSMUST00000122765 81 ntBASIC-1,28□□□□□ -2,61
Col28a1Q2UY11 Gm26231-201ENSMUST00000175218 67 ntBASIC-1,29□□□□□ -2,62
Col28a1Q2UY11 Mir2136-201ENSMUST00000158781 75 ntBASIC-1,32□□□□□ -2,62
Col28a1Q2UY11 Gm23125-201ENSMUST00000157651 106 ntBASIC-1,33□□□□□ -2,62
Col28a1Q2UY11 Mir6395-201ENSMUST00000183885 91 ntBASIC-1,34□□□□□ -2,62
Col28a1Q2UY11 Gm26008-201ENSMUST00000158797 99 ntBASIC-1,36□□□□□ -2,63
Col28a1Q2UY11 Gm26307-201ENSMUST00000157767 126 ntBASIC-1,37□□□□□ -2,63
Col28a1Q2UY11 Gm23066-201ENSMUST00000158237 71 ntBASIC-1,37□□□□□ -2,63
Col28a1Q2UY11 Gm27882-201ENSMUST00000184904 74 ntBASIC-1,37□□□□□ -2,63
Col28a1Q2UY11 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-1,4□□□□□ -2,63
Col28a1Q2UY11 Gm25254-201ENSMUST00000157239 104 ntBASIC-1,41□□□□□ -2,64
Col28a1Q2UY11 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1,44□□□□□ -2,64
Col28a1Q2UY11 Mir154-201ENSMUST00000083514 66 ntBASIC-1,47□□□□□ -2,64
Col28a1Q2UY11 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1,49□□□□□ -2,65
Col28a1Q2UY11 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1,49□□□□□ -2,65
Col28a1Q2UY11 Gm27671-201ENSMUST00000183739 66 ntBASIC-1,55□□□□□ -2,66
Col28a1Q2UY11 Gm23210-201ENSMUST00000158668 98 ntBASIC-1,76□□□□□ -2,69
Col28a1Q2UY11 Gm23248-201ENSMUST00000083367 108 ntBASIC-1,92□□□□□ -2,72
Col28a1Q2UY11 n-R5s214-201ENSMUST00000122494 121 ntBASIC-1,94□□□□□ -2,72
Col28a1Q2UY11 Gm25039-201ENSMUST00000082933 107 ntBASIC-2,05□□□□□ -2,74
Retrieved 32 of 76,532 protein–RNA pairs in 106,9 ms