Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mir485-201ENSMUST00000093620 73 ntBASIC-1,71□□□□□ -2,68
Col2a1P28481 Mir7681-201ENSMUST00000184834 72 ntBASIC-1,72□□□□□ -2,68
Col2a1P28481 Gm25297-201ENSMUST00000175490 67 ntBASIC-1,73□□□□□ -2,69
Col2a1P28481 Gm26231-201ENSMUST00000175218 67 ntBASIC-1,75□□□□□ -2,69
Col2a1P28481 Gm24531-201ENSMUST00000157945 100 ntBASIC-1,75□□□□□ -2,69
Col2a1P28481 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-1,78□□□□□ -2,69
Col2a1P28481 Gm25867-201ENSMUST00000158254 103 ntBASIC-1,8□□□□□ -2,7
Col2a1P28481 Mir6395-201ENSMUST00000183885 91 ntBASIC-1,81□□□□□ -2,7
Col2a1P28481 Gm27882-201ENSMUST00000184904 74 ntBASIC-1,82□□□□□ -2,7
Col2a1P28481 Gm20473-201ENSMUST00000173064 112 ntBASIC-1,84□□□□□ -2,7
Col2a1P28481 Gm26307-201ENSMUST00000157767 126 ntBASIC-1,85□□□□□ -2,71
Col2a1P28481 Gm26008-201ENSMUST00000158797 99 ntBASIC-1,86□□□□□ -2,71
Col2a1P28481 Gm27995-201ENSMUST00000184402 100 ntBASIC-1,86□□□□□ -2,71
Col2a1P28481 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1,88□□□□□ -2,71
Col2a1P28481 Mir1912-201ENSMUST00000175298 87 ntBASIC-1,88□□□□□ -2,71
Col2a1P28481 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1,9□□□□□ -2,71
Col2a1P28481 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1,9□□□□□ -2,71
Col2a1P28481 Gm23676-201ENSMUST00000157314 105 ntBASIC-1,92□□□□□ -2,72
Col2a1P28481 Mir154-201ENSMUST00000083514 66 ntBASIC-1,94□□□□□ -2,72
Col2a1P28481 Gm25521-201ENSMUST00000158393 108 ntBASIC-1,96□□□□□ -2,72
Col2a1P28481 Mir2136-201ENSMUST00000158781 75 ntBASIC-1,98□□□□□ -2,73
Col2a1P28481 Gm25049-201ENSMUST00000158597 73 ntBASIC-2,03□□□□□ -2,73
Col2a1P28481 Gm25254-201ENSMUST00000157239 104 ntBASIC-2,04□□□□□ -2,74
Col2a1P28481 Gm27671-201ENSMUST00000183739 66 ntBASIC-2,04□□□□□ -2,74
Col2a1P28481 Gm22593-201ENSMUST00000104245 109 ntBASIC-2,07□□□□□ -2,74
Col2a1P28481 Gm25886-201ENSMUST00000157780 114 ntBASIC-2,22□□□□□ -2,77
Col2a1P28481 Gm23210-201ENSMUST00000158668 98 ntBASIC-2,32□□□□□ -2,78
Col2a1P28481 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2,39□□□□□ -2,79
Col2a1P28481 Gm25039-201ENSMUST00000082933 107 ntBASIC-2,57□□□□□ -2,82
Col2a1P28481 Gm23125-201ENSMUST00000157651 106 ntBASIC-2,58□□□□□ -2,82
Col2a1P28481 Gm23248-201ENSMUST00000083367 108 ntBASIC-2,6□□□□□ -2,83
Col2a1P28481 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2,8□□□□□ -2,86
Retrieved 32 of 76,532 protein–RNA pairs in 96,5 ms