Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mir335-201ENSMUST00000083567 98 ntBASIC-1.29□□□□□ -2.62
Col5a1O88207 Gm24531-201ENSMUST00000157945 100 ntBASIC-1.29□□□□□ -2.62
Col5a1O88207 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.29□□□□□ -2.62
Col5a1O88207 Mir351-201ENSMUST00000083569 99 ntBASIC-1.3□□□□□ -2.62
Col5a1O88207 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.31□□□□□ -2.62
Col5a1O88207 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.31□□□□□ -2.62
Col5a1O88207 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.31□□□□□ -2.62
Col5a1O88207 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.32□□□□□ -2.62
Col5a1O88207 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.32□□□□□ -2.62
Col5a1O88207 Gm27882-201ENSMUST00000184904 74 ntBASIC-1.33□□□□□ -2.62
Col5a1O88207 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1.36□□□□□ -2.63
Col5a1O88207 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.36□□□□□ -2.63
Col5a1O88207 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.36□□□□□ -2.63
Col5a1O88207 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.36□□□□□ -2.63
Col5a1O88207 Gm26008-201ENSMUST00000158797 99 ntBASIC-1.37□□□□□ -2.63
Col5a1O88207 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.38□□□□□ -2.63
Col5a1O88207 Mir154-201ENSMUST00000083514 66 ntBASIC-1.39□□□□□ -2.63
Col5a1O88207 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.4□□□□□ -2.63
Col5a1O88207 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.43□□□□□ -2.64
Col5a1O88207 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.44□□□□□ -2.64
Col5a1O88207 Gm25521-201ENSMUST00000158393 108 ntBASIC-1.47□□□□□ -2.64
Col5a1O88207 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.51□□□□□ -2.65
Col5a1O88207 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.54□□□□□ -2.66
Col5a1O88207 Gm25254-201ENSMUST00000157239 104 ntBASIC-1.59□□□□□ -2.66
Col5a1O88207 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.61□□□□□ -2.67
Col5a1O88207 Gm25886-201ENSMUST00000157780 114 ntBASIC-1.63□□□□□ -2.67
Col5a1O88207 Gm25039-201ENSMUST00000082933 107 ntBASIC-1.68□□□□□ -2.68
Col5a1O88207 Gm23210-201ENSMUST00000158668 98 ntBASIC-1.75□□□□□ -2.69
Col5a1O88207 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.87□□□□□ -2.71
Col5a1O88207 Gm23248-201ENSMUST00000083367 108 ntBASIC-1.88□□□□□ -2.71
Col5a1O88207 Gm23125-201ENSMUST00000157651 106 ntBASIC-1.91□□□□□ -2.72
Col5a1O88207 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2.14□□□□□ -2.75
Retrieved 32 of 76,532 protein–RNA pairs in 3.3 ms