Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.7□□□□□ -2.68
Igkv8-28A0A0G2JE47 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.7□□□□□ -2.68
Igkv8-28A0A0G2JE47 Gm26008-201ENSMUST00000158797 99 ntBASIC-1.71□□□□□ -2.68
Igkv8-28A0A0G2JE47 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1.71□□□□□ -2.68
Igkv8-28A0A0G2JE47 Mir154-201ENSMUST00000083514 66 ntBASIC-1.73□□□□□ -2.69
Igkv8-28A0A0G2JE47 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.76□□□□□ -2.69
Igkv8-28A0A0G2JE47 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.77□□□□□ -2.69
Igkv8-28A0A0G2JE47 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.8□□□□□ -2.7
Igkv8-28A0A0G2JE47 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.8□□□□□ -2.7
Igkv8-28A0A0G2JE47 Gm25254-201ENSMUST00000157239 104 ntBASIC-1.8□□□□□ -2.7
Igkv8-28A0A0G2JE47 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.81□□□□□ -2.7
Igkv8-28A0A0G2JE47 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.87□□□□□ -2.71
Igkv8-28A0A0G2JE47 Gm25521-201ENSMUST00000158393 108 ntBASIC-1.88□□□□□ -2.71
Igkv8-28A0A0G2JE47 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.9□□□□□ -2.71
Igkv8-28A0A0G2JE47 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.9□□□□□ -2.71
Igkv8-28A0A0G2JE47 Mir335-201ENSMUST00000083567 98 ntBASIC-1.94□□□□□ -2.72
Igkv8-28A0A0G2JE47 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.97□□□□□ -2.72
Igkv8-28A0A0G2JE47 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.01□□□□□ -2.73
Igkv8-28A0A0G2JE47 Gm25886-201ENSMUST00000157780 114 ntBASIC-2.03□□□□□ -2.73
Igkv8-28A0A0G2JE47 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
Igkv8-28A0A0G2JE47 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.06□□□□□ -2.74
Igkv8-28A0A0G2JE47 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.06□□□□□ -2.74
Igkv8-28A0A0G2JE47 Gm23335-201ENSMUST00000117021 90 ntBASIC-2.07□□□□□ -2.74
Igkv8-28A0A0G2JE47 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.07□□□□□ -2.74
Igkv8-28A0A0G2JE47 Mir351-201ENSMUST00000083569 99 ntBASIC-2.09□□□□□ -2.74
Igkv8-28A0A0G2JE47 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.17□□□□□ -2.76
Igkv8-28A0A0G2JE47 Gm23125-201ENSMUST00000157651 106 ntBASIC-2.32□□□□□ -2.78
Igkv8-28A0A0G2JE47 Gm25039-201ENSMUST00000082933 107 ntBASIC-2.34□□□□□ -2.78
Igkv8-28A0A0G2JE47 Gm23248-201ENSMUST00000083367 108 ntBASIC-2.4□□□□□ -2.79
Igkv8-28A0A0G2JE47 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.48□□□□□ -2.81
Igkv8-28A0A0G2JE47 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2.51□□□□□ -2.81
Igkv8-28A0A0G2JE47 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.73□□□□□ -2.85
Retrieved 32 of 76,532 protein–RNA pairs in 9.5 ms