Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Gm22301-201ENSMUST00000082656 107 ntBASIC-3.88□□□□□ -3.03
Ighv1-20A0A0A6YX66 Gm25045-201ENSMUST00000122670 99 ntBASIC-3.95□□□□□ -3.04
Ighv1-20A0A0A6YX66 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.96□□□□□ -3.04
Ighv1-20A0A0A6YX66 Gm22550-201ENSMUST00000179774 107 ntBASIC-4.01□□□□□ -3.05
Ighv1-20A0A0A6YX66 Gm22060-201ENSMUST00000082558 107 ntBASIC-4.01□□□□□ -3.05
Ighv1-20A0A0A6YX66 Gm22540-201ENSMUST00000158168 117 ntBASIC-4.06□□□□□ -3.06
Ighv1-20A0A0A6YX66 Gm24387-201ENSMUST00000104625 90 ntBASIC-4.09□□□□□ -3.06
Ighv1-20A0A0A6YX66 Gm26306-201ENSMUST00000157773 119 ntBASIC-4.09□□□□□ -3.06
Ighv1-20A0A0A6YX66 Mir7681-201ENSMUST00000184834 72 ntBASIC-4.17□□□□□ -3.08
Ighv1-20A0A0A6YX66 Gm26259-201ENSMUST00000104778 97 ntBASIC-4.18□□□□□ -3.08
Ighv1-20A0A0A6YX66 Gm24194-201ENSMUST00000116805 90 ntBASIC-4.2□□□□□ -3.08
Ighv1-20A0A0A6YX66 Gm27671-201ENSMUST00000183739 66 ntBASIC-4.2□□□□□ -3.08
Ighv1-20A0A0A6YX66 Gm25132-201ENSMUST00000082652 107 ntBASIC-4.23□□□□□ -3.09
Ighv1-20A0A0A6YX66 Gm25950-201ENSMUST00000175331 100 ntBASIC-4.26□□□□□ -3.09
Ighv1-20A0A0A6YX66 Gm23210-201ENSMUST00000158668 98 ntBASIC-4.28□□□□□ -3.09
Ighv1-20A0A0A6YX66 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-4.29□□□□□ -3.1
Ighv1-20A0A0A6YX66 Gm22069-201ENSMUST00000179911 107 ntBASIC-4.35□□□□□ -3.11
Ighv1-20A0A0A6YX66 Gm44303-201ENSMUST00000196348 83 ntBASIC-4.36□□□□□ -3.11
Ighv1-20A0A0A6YX66 Gm25521-201ENSMUST00000158393 108 ntBASIC-4.49□□□□□ -3.13
Ighv1-20A0A0A6YX66 Gm25254-201ENSMUST00000157239 104 ntBASIC-4.59□□□□□ -3.14
Ighv1-20A0A0A6YX66 Gm22943-201ENSMUST00000158564 76 ntBASIC-4.62□□□□□ -3.15
Ighv1-20A0A0A6YX66 Gm27645-201ENSMUST00000183348 77 ntBASIC-4.68□□□□□ -3.16
Ighv1-20A0A0A6YX66 Gm20473-201ENSMUST00000173064 112 ntBASIC-4.75□□□□□ -3.17
Ighv1-20A0A0A6YX66 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4.84□□□□□ -3.18
Ighv1-20A0A0A6YX66 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.92□□□□□ -3.2
Ighv1-20A0A0A6YX66 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.93□□□□□ -3.2
Ighv1-20A0A0A6YX66 Gm24531-201ENSMUST00000157945 100 ntBASIC-5.23□□□□□ -3.25
Ighv1-20A0A0A6YX66 Gm23248-201ENSMUST00000083367 108 ntBASIC-5.42□□□□□ -3.28
Ighv1-20A0A0A6YX66 Gm22593-201ENSMUST00000104245 109 ntBASIC-5.53□□□□□ -3.29
Ighv1-20A0A0A6YX66 AC160976.1-201ENSMUST00000215092 148 ntBASIC-5.94□□□□□ -3.36
Ighv1-20A0A0A6YX66 Gm25886-201ENSMUST00000157780 114 ntBASIC-6.47□□□□□ -3.45
Ighv1-20A0A0A6YX66 Gm23125-201ENSMUST00000157651 106 ntBASIC-6.56□□□□□ -3.46
Retrieved 32 of 76,532 protein–RNA pairs in 182.6 ms