Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm22550-201ENSMUST00000179774 107 ntBASIC-4,79□□□□□ -3,18
Trav16d-dv11A0A075B617 Gm22060-201ENSMUST00000082558 107 ntBASIC-4,79□□□□□ -3,18
Trav16d-dv11A0A075B617 Gm25354-201ENSMUST00000179110 105 ntBASIC-4,82□□□□□ -3,18
Trav16d-dv11A0A075B617 Mir7681-201ENSMUST00000184834 72 ntBASIC-4,82□□□□□ -3,18
Trav16d-dv11A0A075B617 Gm22067-201ENSMUST00000122790 107 ntBASIC-4,95□□□□□ -3,2
Trav16d-dv11A0A075B617 Gm24194-201ENSMUST00000116805 90 ntBASIC-4,98□□□□□ -3,21
Trav16d-dv11A0A075B617 Gm27671-201ENSMUST00000183739 66 ntBASIC-5□□□□□ -3,21
Trav16d-dv11A0A075B617 Gm23237-201ENSMUST00000104639 92 ntBASIC-5,04□□□□□ -3,22
Trav16d-dv11A0A075B617 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-5,05□□□□□ -3,22
Trav16d-dv11A0A075B617 Gm23210-201ENSMUST00000158668 98 ntBASIC-5,05□□□□□ -3,22
Trav16d-dv11A0A075B617 Gm44303-201ENSMUST00000196348 83 ntBASIC-5,06□□□□□ -3,22
Trav16d-dv11A0A075B617 Gm25132-201ENSMUST00000082652 107 ntBASIC-5,06□□□□□ -3,22
Trav16d-dv11A0A075B617 Gm25521-201ENSMUST00000158393 108 ntBASIC-5,07□□□□□ -3,22
Trav16d-dv11A0A075B617 Gm26259-201ENSMUST00000104778 97 ntBASIC-5,14□□□□□ -3,23
Trav16d-dv11A0A075B617 Gm22033-201ENSMUST00000116947 90 ntBASIC-5,22□□□□□ -3,25
Trav16d-dv11A0A075B617 Gm25254-201ENSMUST00000157239 104 ntBASIC-5,39□□□□□ -3,27
Trav16d-dv11A0A075B617 Gm22540-201ENSMUST00000158168 117 ntBASIC-5,51□□□□□ -3,29
Trav16d-dv11A0A075B617 Gm25045-201ENSMUST00000122670 99 ntBASIC-5,54□□□□□ -3,3
Trav16d-dv11A0A075B617 Gm20473-201ENSMUST00000173064 112 ntBASIC-5,63□□□□□ -3,31
Trav16d-dv11A0A075B617 n-R5s214-201ENSMUST00000122494 121 ntBASIC-5,66□□□□□ -3,32
Trav16d-dv11A0A075B617 Gm25049-201ENSMUST00000158597 73 ntBASIC-5,66□□□□□ -3,32
Trav16d-dv11A0A075B617 Gm25950-201ENSMUST00000175331 100 ntBASIC-5,66□□□□□ -3,32
Trav16d-dv11A0A075B617 Gm25039-201ENSMUST00000082933 107 ntBASIC-5,89□□□□□ -3,35
Trav16d-dv11A0A075B617 Gm22069-201ENSMUST00000179911 107 ntBASIC-6,04□□□□□ -3,38
Trav16d-dv11A0A075B617 Gm24531-201ENSMUST00000157945 100 ntBASIC-6,35□□□□□ -3,43
Trav16d-dv11A0A075B617 Gm22943-201ENSMUST00000158564 76 ntBASIC-6,35□□□□□ -3,43
Trav16d-dv11A0A075B617 Gm23248-201ENSMUST00000083367 108 ntBASIC-6,42□□□□□ -3,44
Trav16d-dv11A0A075B617 Gm22593-201ENSMUST00000104245 109 ntBASIC-6,59□□□□□ -3,46
Trav16d-dv11A0A075B617 Gm27645-201ENSMUST00000183348 77 ntBASIC-6,81□□□□□ -3,5
Trav16d-dv11A0A075B617 AC160976.1-201ENSMUST00000215092 148 ntBASIC-7,4□□□□□ -3,59
Trav16d-dv11A0A075B617 Gm23125-201ENSMUST00000157651 106 ntBASIC-7,59□□□□□ -3,62
Trav16d-dv11A0A075B617 Gm25886-201ENSMUST00000157780 114 ntBASIC-7,82□□□□□ -3,66
Retrieved 32 of 76,532 protein–RNA pairs in 96,1 ms