Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.17□□□□□ -2.6
Ushbp1Q8R370 Snord123-201ENSMUST00000158692 71 ntBASIC-1.17□□□□□ -2.6
Ushbp1Q8R370 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.17□□□□□ -2.6
Ushbp1Q8R370 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.18□□□□□ -2.6
Ushbp1Q8R370 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.18□□□□□ -2.6
Ushbp1Q8R370 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.18□□□□□ -2.6
Ushbp1Q8R370 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.18□□□□□ -2.6
Ushbp1Q8R370 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.2□□□□□ -2.6
Ushbp1Q8R370 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.2□□□□□ -2.6
Ushbp1Q8R370 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.21□□□□□ -2.6
Ushbp1Q8R370 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.22□□□□□ -2.6
Ushbp1Q8R370 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.22□□□□□ -2.6
Ushbp1Q8R370 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.23□□□□□ -2.61
Ushbp1Q8R370 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.23□□□□□ -2.61
Ushbp1Q8R370 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.23□□□□□ -2.61
Ushbp1Q8R370 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.23□□□□□ -2.61
Ushbp1Q8R370 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.26□□□□□ -2.61
Ushbp1Q8R370 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.28□□□□□ -2.61
Ushbp1Q8R370 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.28□□□□□ -2.61
Ushbp1Q8R370 Mir543-201ENSMUST00000102286 76 ntBASIC-1.29□□□□□ -2.62
Ushbp1Q8R370 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.29□□□□□ -2.62
Ushbp1Q8R370 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
Ushbp1Q8R370 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.33□□□□□ -2.62
Ushbp1Q8R370 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.34□□□□□ -2.62
Ushbp1Q8R370 Mir192-201ENSMUST00000083589 89 ntBASIC-1.35□□□□□ -2.63
Ushbp1Q8R370 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.37□□□□□ -2.63
Ushbp1Q8R370 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.39□□□□□ -2.63
Ushbp1Q8R370 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.4□□□□□ -2.63
Ushbp1Q8R370 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.44□□□□□ -2.64
Ushbp1Q8R370 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.44□□□□□ -2.64
Ushbp1Q8R370 Gm22301-201ENSMUST00000082656 107 ntBASIC-1.44□□□□□ -2.64
Ushbp1Q8R370 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.45□□□□□ -2.64
Ushbp1Q8R370 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.47□□□□□ -2.64
Ushbp1Q8R370 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.48□□□□□ -2.65
Ushbp1Q8R370 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
Ushbp1Q8R370 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
Ushbp1Q8R370 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.49□□□□□ -2.65
Ushbp1Q8R370 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.5□□□□□ -2.65
Ushbp1Q8R370 Mir539-201ENSMUST00000102109 74 ntBASIC-1.51□□□□□ -2.65
Ushbp1Q8R370 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.51□□□□□ -2.65
Ushbp1Q8R370 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.51□□□□□ -2.65
Ushbp1Q8R370 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.51□□□□□ -2.65
Ushbp1Q8R370 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.53□□□□□ -2.65
Ushbp1Q8R370 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.54□□□□□ -2.66
Ushbp1Q8R370 Gm26227-201ENSMUST00000082510 101 ntBASIC-1.54□□□□□ -2.66
Ushbp1Q8R370 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.57□□□□□ -2.66
Ushbp1Q8R370 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.59□□□□□ -2.66
Ushbp1Q8R370 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.59□□□□□ -2.66
Ushbp1Q8R370 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.59□□□□□ -2.66
Ushbp1Q8R370 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.6□□□□□ -2.67
Ushbp1Q8R370 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.6□□□□□ -2.67
Ushbp1Q8R370 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.6□□□□□ -2.67
Ushbp1Q8R370 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.61□□□□□ -2.67
Ushbp1Q8R370 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.62□□□□□ -2.67
Ushbp1Q8R370 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.62□□□□□ -2.67
Ushbp1Q8R370 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.63□□□□□ -2.67
Ushbp1Q8R370 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.63□□□□□ -2.67
Ushbp1Q8R370 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.64□□□□□ -2.67
Ushbp1Q8R370 Mir122-201ENSMUST00000083468 66 ntBASIC-1.66□□□□□ -2.68
Ushbp1Q8R370 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.7□□□□□ -2.68
Ushbp1Q8R370 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.7□□□□□ -2.68
Ushbp1Q8R370 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.72□□□□□ -2.68
Ushbp1Q8R370 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.73□□□□□ -2.69
Ushbp1Q8R370 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.73□□□□□ -2.69
Ushbp1Q8R370 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1.75□□□□□ -2.69
Ushbp1Q8R370 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
Ushbp1Q8R370 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.77□□□□□ -2.69
Ushbp1Q8R370 Mir379-201ENSMUST00000083564 66 ntBASIC-1.78□□□□□ -2.69
Ushbp1Q8R370 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.83□□□□□ -2.7
Ushbp1Q8R370 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.86□□□□□ -2.71
Ushbp1Q8R370 Gm24531-201ENSMUST00000157945 100 ntBASIC-1.87□□□□□ -2.71
Ushbp1Q8R370 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.01□□□□□ -2.73
Ushbp1Q8R370 Mir664-201ENSMUST00000196796 69 ntBASIC-2.01□□□□□ -2.73
Ushbp1Q8R370 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.02□□□□□ -2.73
Ushbp1Q8R370 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.03□□□□□ -2.73
Ushbp1Q8R370 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.03□□□□□ -2.73
Ushbp1Q8R370 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.08□□□□□ -2.74
Ushbp1Q8R370 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.11□□□□□ -2.75
Ushbp1Q8R370 Gm44303-201ENSMUST00000196348 83 ntBASIC-2.12□□□□□ -2.75
Ushbp1Q8R370 Mir470-201ENSMUST00000093565 75 ntBASIC-2.12□□□□□ -2.75
Ushbp1Q8R370 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.13□□□□□ -2.75
Ushbp1Q8R370 Gm20473-201ENSMUST00000173064 112 ntBASIC-2.14□□□□□ -2.75
Ushbp1Q8R370 Mir7681-201ENSMUST00000184834 72 ntBASIC-2.14□□□□□ -2.75
Ushbp1Q8R370 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.16□□□□□ -2.76
Ushbp1Q8R370 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.17□□□□□ -2.76
Ushbp1Q8R370 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.19□□□□□ -2.76
Ushbp1Q8R370 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.19□□□□□ -2.76
Ushbp1Q8R370 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.24□□□□□ -2.77
Ushbp1Q8R370 Mir485-201ENSMUST00000093620 73 ntBASIC-2.24□□□□□ -2.77
Ushbp1Q8R370 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.25□□□□□ -2.77
Ushbp1Q8R370 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.25□□□□□ -2.77
Ushbp1Q8R370 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.26□□□□□ -2.77
Ushbp1Q8R370 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.28□□□□□ -2.77
Ushbp1Q8R370 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.28□□□□□ -2.77
Ushbp1Q8R370 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.3□□□□□ -2.78
Ushbp1Q8R370 Mir493-201ENSMUST00000103837 83 ntBASIC-2.33□□□□□ -2.78
Ushbp1Q8R370 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.33□□□□□ -2.78
Ushbp1Q8R370 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.39□□□□□ -2.79
Ushbp1Q8R370 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.39□□□□□ -2.79
Ushbp1Q8R370 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 264.5 ms