Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.69□□□□□ -2.52
Trim56Q80VI1 Gm25132-201ENSMUST00000082652 107 ntBASIC-0.69□□□□□ -2.52
Trim56Q80VI1 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.7□□□□□ -2.52
Trim56Q80VI1 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.71□□□□□ -2.52
Trim56Q80VI1 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.72□□□□□ -2.52
Trim56Q80VI1 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.73□□□□□ -2.53
Trim56Q80VI1 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.75□□□□□ -2.53
Trim56Q80VI1 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.76□□□□□ -2.53
Trim56Q80VI1 Gm24646-201ENSMUST00000157109 99 ntBASIC-0.77□□□□□ -2.53
Trim56Q80VI1 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.77□□□□□ -2.53
Trim56Q80VI1 Gm23315-201ENSMUST00000158003 109 ntBASIC-0.77□□□□□ -2.53
Trim56Q80VI1 Snord8-201ENSMUST00000175303 110 ntBASIC-0.77□□□□□ -2.53
Trim56Q80VI1 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.78□□□□□ -2.53
Trim56Q80VI1 Snord123-201ENSMUST00000158692 71 ntBASIC-0.79□□□□□ -2.54
Trim56Q80VI1 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.79□□□□□ -2.54
Trim56Q80VI1 Mir192-201ENSMUST00000083589 89 ntBASIC-0.8□□□□□ -2.54
Trim56Q80VI1 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.8□□□□□ -2.54
Trim56Q80VI1 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.81□□□□□ -2.54
Trim56Q80VI1 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.82□□□□□ -2.54
Trim56Q80VI1 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.83□□□□□ -2.54
Trim56Q80VI1 Gm26472-201ENSMUST00000116760 83 ntBASIC-0.84□□□□□ -2.54
Trim56Q80VI1 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.85□□□□□ -2.55
Trim56Q80VI1 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.85□□□□□ -2.55
Trim56Q80VI1 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.85□□□□□ -2.55
Trim56Q80VI1 Gm24502-201ENSMUST00000158453 105 ntBASIC-0.87□□□□□ -2.55
Trim56Q80VI1 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.87□□□□□ -2.55
Trim56Q80VI1 Gm22232-201ENSMUST00000104654 94 ntBASIC-0.88□□□□□ -2.55
Trim56Q80VI1 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.88□□□□□ -2.55
Trim56Q80VI1 Gm25143-201ENSMUST00000082696 109 ntBASIC-0.88□□□□□ -2.55
Trim56Q80VI1 Snord58b-201ENSMUST00000082937 66 ntBASIC-0.88□□□□□ -2.55
Trim56Q80VI1 Gm24194-201ENSMUST00000116805 90 ntBASIC-0.89□□□□□ -2.55
Trim56Q80VI1 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.89□□□□□ -2.55
Trim56Q80VI1 Mir539-201ENSMUST00000102109 74 ntBASIC-0.91□□□□□ -2.56
Trim56Q80VI1 Gm25886-201ENSMUST00000157780 114 ntBASIC-0.91□□□□□ -2.56
Trim56Q80VI1 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.96□□□□□ -2.56
Trim56Q80VI1 Mir543-201ENSMUST00000102286 76 ntBASIC-0.97□□□□□ -2.56
Trim56Q80VI1 Gm22925-201ENSMUST00000174956 102 ntBASIC-0.97□□□□□ -2.56
Trim56Q80VI1 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
Trim56Q80VI1 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
Trim56Q80VI1 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.99□□□□□ -2.57
Trim56Q80VI1 Gm22313-201ENSMUST00000158008 129 ntBASIC-1□□□□□ -2.57
Trim56Q80VI1 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.01□□□□□ -2.57
Trim56Q80VI1 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-1.02□□□□□ -2.57
Trim56Q80VI1 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.02□□□□□ -2.57
Trim56Q80VI1 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.02□□□□□ -2.57
Trim56Q80VI1 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.02□□□□□ -2.57
Trim56Q80VI1 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.04□□□□□ -2.58
Trim56Q80VI1 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.04□□□□□ -2.58
Trim56Q80VI1 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.05□□□□□ -2.58
Trim56Q80VI1 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.06□□□□□ -2.58
Trim56Q80VI1 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.09□□□□□ -2.58
Trim56Q80VI1 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.09□□□□□ -2.58
Trim56Q80VI1 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.11□□□□□ -2.59
Trim56Q80VI1 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.12□□□□□ -2.59
Trim56Q80VI1 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.12□□□□□ -2.59
Trim56Q80VI1 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.13□□□□□ -2.59
Trim56Q80VI1 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.13□□□□□ -2.59
Trim56Q80VI1 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.14□□□□□ -2.59
Trim56Q80VI1 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.14□□□□□ -2.59
Trim56Q80VI1 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.15□□□□□ -2.59
Trim56Q80VI1 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.15□□□□□ -2.59
Trim56Q80VI1 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.16□□□□□ -2.6
Trim56Q80VI1 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.16□□□□□ -2.6
Trim56Q80VI1 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.18□□□□□ -2.6
Trim56Q80VI1 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.19□□□□□ -2.6
Trim56Q80VI1 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.19□□□□□ -2.6
Trim56Q80VI1 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
Trim56Q80VI1 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.23□□□□□ -2.61
Trim56Q80VI1 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.26□□□□□ -2.61
Trim56Q80VI1 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.26□□□□□ -2.61
Trim56Q80VI1 Mir664-201ENSMUST00000196796 69 ntBASIC-1.26□□□□□ -2.61
Trim56Q80VI1 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.29□□□□□ -2.62
Trim56Q80VI1 Mir379-201ENSMUST00000083564 66 ntBASIC-1.3□□□□□ -2.62
Trim56Q80VI1 Gm25049-201ENSMUST00000158597 73 ntBASIC-1.34□□□□□ -2.62
Trim56Q80VI1 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.36□□□□□ -2.63
Trim56Q80VI1 Mir122-201ENSMUST00000083468 66 ntBASIC-1.42□□□□□ -2.64
Trim56Q80VI1 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.43□□□□□ -2.64
Trim56Q80VI1 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.45□□□□□ -2.64
Trim56Q80VI1 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.48□□□□□ -2.65
Trim56Q80VI1 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.49□□□□□ -2.65
Trim56Q80VI1 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.49□□□□□ -2.65
Trim56Q80VI1 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.49□□□□□ -2.65
Trim56Q80VI1 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.52□□□□□ -2.65
Trim56Q80VI1 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.54□□□□□ -2.66
Trim56Q80VI1 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.55□□□□□ -2.66
Trim56Q80VI1 Mir1912-201ENSMUST00000175298 87 ntBASIC-1.56□□□□□ -2.66
Trim56Q80VI1 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
Trim56Q80VI1 Mir493-201ENSMUST00000103837 83 ntBASIC-1.59□□□□□ -2.66
Trim56Q80VI1 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.59□□□□□ -2.66
Trim56Q80VI1 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.66□□□□□ -2.68
Trim56Q80VI1 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.67□□□□□ -2.68
Trim56Q80VI1 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.68□□□□□ -2.68
Trim56Q80VI1 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.68□□□□□ -2.68
Trim56Q80VI1 Gm25867-201ENSMUST00000158254 103 ntBASIC-1.7□□□□□ -2.68
Trim56Q80VI1 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.72□□□□□ -2.68
Trim56Q80VI1 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.72□□□□□ -2.68
Trim56Q80VI1 Gm25521-201ENSMUST00000158393 108 ntBASIC-1.73□□□□□ -2.69
Trim56Q80VI1 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.74□□□□□ -2.69
Trim56Q80VI1 Mir335-201ENSMUST00000083567 98 ntBASIC-1.77□□□□□ -2.69
Trim56Q80VI1 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms