Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm26262-201ENSMUST00000158024 127 ntBASIC-0,24□□□□□ -2,45
Sh3rf1Q69ZI1 Mir148a-201ENSMUST00000083571 99 ntBASIC-0,25□□□□□ -2,45
Sh3rf1Q69ZI1 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0,26□□□□□ -2,45
Sh3rf1Q69ZI1 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0,26□□□□□ -2,45
Sh3rf1Q69ZI1 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0,26□□□□□ -2,45
Sh3rf1Q69ZI1 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0,26□□□□□ -2,45
Sh3rf1Q69ZI1 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0,26□□□□□ -2,45
Sh3rf1Q69ZI1 Gm26125-201ENSMUST00000083357 107 ntBASIC-0,27□□□□□ -2,45
Sh3rf1Q69ZI1 Gm25905-201ENSMUST00000158490 101 ntBASIC-0,28□□□□□ -2,45
Sh3rf1Q69ZI1 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0,28□□□□□ -2,45
Sh3rf1Q69ZI1 Mir677-202ENSMUST00000197076 78 ntBASIC-0,28□□□□□ -2,45
Sh3rf1Q69ZI1 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0,28□□□□□ -2,45
Sh3rf1Q69ZI1 Gm24502-201ENSMUST00000158453 105 ntBASIC-0,29□□□□□ -2,46
Sh3rf1Q69ZI1 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0,29□□□□□ -2,46
Sh3rf1Q69ZI1 Gm44303-201ENSMUST00000196348 83 ntBASIC-0,29□□□□□ -2,46
Sh3rf1Q69ZI1 Gm26472-201ENSMUST00000116760 83 ntBASIC-0,3□□□□□ -2,46
Sh3rf1Q69ZI1 Mir7086-201ENSMUST00000183683 65 ntBASIC-0,3□□□□□ -2,46
Sh3rf1Q69ZI1 Mir378c-201ENSMUST00000184478 99 ntBASIC-0,3□□□□□ -2,46
Sh3rf1Q69ZI1 Mir7218-201ENSMUST00000200050 59 ntBASIC-0,32□□□□□ -2,46
Sh3rf1Q69ZI1 Gm25143-201ENSMUST00000082696 109 ntBASIC-0,32□□□□□ -2,46
Sh3rf1Q69ZI1 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0,34□□□□□ -2,46
Sh3rf1Q69ZI1 Mir3101-201ENSMUST00000175607 88 ntBASIC-0,34□□□□□ -2,46
Sh3rf1Q69ZI1 Mir192-201ENSMUST00000083589 89 ntBASIC-0,34□□□□□ -2,46
Sh3rf1Q69ZI1 Gm24714-201ENSMUST00000102382 101 ntBASIC-0,35□□□□□ -2,47
Sh3rf1Q69ZI1 Gm23308-201ENSMUST00000179475 107 ntBASIC-0,36□□□□□ -2,47
Sh3rf1Q69ZI1 Mir7057-201ENSMUST00000184685 58 ntBASIC-0,37□□□□□ -2,47
Sh3rf1Q69ZI1 Gm22813-202ENSMUST00000200346 124 ntBASIC-0,37□□□□□ -2,47
Sh3rf1Q69ZI1 Gm22566-201ENSMUST00000175541 85 ntBASIC-0,38□□□□□ -2,47
Sh3rf1Q69ZI1 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0,38□□□□□ -2,47
Sh3rf1Q69ZI1 Gm25049-201ENSMUST00000158597 73 ntBASIC-0,39□□□□□ -2,47
Sh3rf1Q69ZI1 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0,39□□□□□ -2,47
Sh3rf1Q69ZI1 Gm23166-201ENSMUST00000157164 101 ntBASIC-0,4□□□□□ -2,47
Sh3rf1Q69ZI1 Gm23831-201ENSMUST00000158895 85 ntBASIC-0,4□□□□□ -2,47
Sh3rf1Q69ZI1 Gm24387-201ENSMUST00000104625 90 ntBASIC-0,41□□□□□ -2,48
Sh3rf1Q69ZI1 Gm25493-201ENSMUST00000157375 103 ntBASIC-0,41□□□□□ -2,48
Sh3rf1Q69ZI1 Gm24775-201ENSMUST00000157377 99 ntBASIC-0,43□□□□□ -2,48
Sh3rf1Q69ZI1 Gm22385-201ENSMUST00000158189 101 ntBASIC-0,43□□□□□ -2,48
Sh3rf1Q69ZI1 Mir7681-201ENSMUST00000184834 72 ntBASIC-0,43□□□□□ -2,48
Sh3rf1Q69ZI1 Gm22938-201ENSMUST00000103956 120 ntBASIC-0,45□□□□□ -2,48
Sh3rf1Q69ZI1 Gm27935-201ENSMUST00000183894 79 ntBASIC-0,46□□□□□ -2,48
Sh3rf1Q69ZI1 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0,46□□□□□ -2,48
Sh3rf1Q69ZI1 Mir539-201ENSMUST00000102109 74 ntBASIC-0,47□□□□□ -2,48
Sh3rf1Q69ZI1 Gm24051-201ENSMUST00000158622 75 ntBASIC-0,47□□□□□ -2,48
Sh3rf1Q69ZI1 Gm26043-201ENSMUST00000116912 91 ntBASIC-0,48□□□□□ -2,49
Sh3rf1Q69ZI1 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0,48□□□□□ -2,49
Sh3rf1Q69ZI1 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0,48□□□□□ -2,49
Sh3rf1Q69ZI1 Mir302c-201ENSMUST00000083548 68 ntBASIC-0,48□□□□□ -2,49
Sh3rf1Q69ZI1 Gm25601-201ENSMUST00000158356 105 ntBASIC-0,49□□□□□ -2,49
Sh3rf1Q69ZI1 Gm23543-201ENSMUST00000158207 106 ntBASIC-0,51□□□□□ -2,49
Sh3rf1Q69ZI1 Gm44311-201ENSMUST00000196448 69 ntBASIC-0,51□□□□□ -2,49
Sh3rf1Q69ZI1 Gm26131-201ENSMUST00000082725 110 ntBASIC-0,51□□□□□ -2,49
Sh3rf1Q69ZI1 Gm22313-201ENSMUST00000158008 129 ntBASIC-0,52□□□□□ -2,49
Sh3rf1Q69ZI1 Gm23556-201ENSMUST00000157821 92 ntBASIC-0,53□□□□□ -2,49
Sh3rf1Q69ZI1 Snord123-201ENSMUST00000158692 71 ntBASIC-0,53□□□□□ -2,49
Sh3rf1Q69ZI1 Gm23216-201ENSMUST00000179545 107 ntBASIC-0,53□□□□□ -2,49
Sh3rf1Q69ZI1 Mir6339-201ENSMUST00000185120 117 ntBASIC-0,54□□□□□ -2,5
Sh3rf1Q69ZI1 Gm23613-201ENSMUST00000082596 87 ntBASIC-0,54□□□□□ -2,5
Sh3rf1Q69ZI1 Gm24704-201ENSMUST00000093715 107 ntBASIC-0,54□□□□□ -2,5
Sh3rf1Q69ZI1 Gm26124-201ENSMUST00000083359 108 ntBASIC-0,55□□□□□ -2,5
Sh3rf1Q69ZI1 Gm26233-201ENSMUST00000175530 70 ntBASIC-0,57□□□□□ -2,5
Sh3rf1Q69ZI1 Gm24554-201ENSMUST00000158654 73 ntBASIC-0,58□□□□□ -2,5
Sh3rf1Q69ZI1 Mir7015-201ENSMUST00000199525 64 ntBASIC-0,58□□□□□ -2,5
Sh3rf1Q69ZI1 Gm43943-201ENSMUST00000204201 113 ntBASIC-0,58□□□□□ -2,5
Sh3rf1Q69ZI1 Mir6961-201ENSMUST00000183874 67 ntBASIC-0,59□□□□□ -2,5
Sh3rf1Q69ZI1 Mir7055-201ENSMUST00000197423 59 ntBASIC-0,6□□□□□ -2,51
Sh3rf1Q69ZI1 Gm24108-201ENSMUST00000175495 77 ntBASIC-0,61□□□□□ -2,51
Sh3rf1Q69ZI1 Gm23974-201ENSMUST00000083321 131 ntBASIC-0,61□□□□□ -2,51
Sh3rf1Q69ZI1 Gm23751-201ENSMUST00000157583 136 ntBASIC-0,63□□□□□ -2,51
Sh3rf1Q69ZI1 Mir664-201ENSMUST00000196796 69 ntBASIC-0,63□□□□□ -2,51
Sh3rf1Q69ZI1 Gm27366-201ENSMUST00000184967 108 ntBASIC-0,64□□□□□ -2,51
Sh3rf1Q69ZI1 Gm23199-201ENSMUST00000158812 107 ntBASIC-0,65□□□□□ -2,51
Sh3rf1Q69ZI1 Mir335-201ENSMUST00000083567 98 ntBASIC-0,66□□□□□ -2,52
Sh3rf1Q69ZI1 Gm23125-201ENSMUST00000157651 106 ntBASIC-0,68□□□□□ -2,52
Sh3rf1Q69ZI1 Gm23637-201ENSMUST00000175075 94 ntBASIC-0,68□□□□□ -2,52
Sh3rf1Q69ZI1 Gm44377-201ENSMUST00000199039 87 ntBASIC-0,68□□□□□ -2,52
Sh3rf1Q69ZI1 Mir351-201ENSMUST00000083569 99 ntBASIC-0,72□□□□□ -2,52
Sh3rf1Q69ZI1 Gm22573-201ENSMUST00000082982 102 ntBASIC-0,73□□□□□ -2,53
Sh3rf1Q69ZI1 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0,75□□□□□ -2,53
Sh3rf1Q69ZI1 Gm22783-201ENSMUST00000104089 107 ntBASIC-0,75□□□□□ -2,53
Sh3rf1Q69ZI1 Mir543-201ENSMUST00000102286 76 ntBASIC-0,78□□□□□ -2,53
Sh3rf1Q69ZI1 Mir451b-201ENSMUST00000196157 72 ntBASIC-0,78□□□□□ -2,53
Sh3rf1Q69ZI1 Gm24538-201ENSMUST00000082612 107 ntBASIC-0,81□□□□□ -2,54
Sh3rf1Q69ZI1 Gm44351-201ENSMUST00000200090 95 ntBASIC-0,82□□□□□ -2,54
Sh3rf1Q69ZI1 Gm22464-201ENSMUST00000175273 64 ntBASIC-0,83□□□□□ -2,54
Sh3rf1Q69ZI1 Mir1912-201ENSMUST00000175298 87 ntBASIC-0,83□□□□□ -2,54
Sh3rf1Q69ZI1 Gm23566-201ENSMUST00000174907 108 ntBASIC-0,87□□□□□ -2,55
Sh3rf1Q69ZI1 Gm22430-201ENSMUST00000158546 107 ntBASIC-0,89□□□□□ -2,55
Sh3rf1Q69ZI1 Gm25297-201ENSMUST00000175490 67 ntBASIC-0,91□□□□□ -2,56
Sh3rf1Q69ZI1 Gm25626-201ENSMUST00000177631 107 ntBASIC-0,91□□□□□ -2,56
Sh3rf1Q69ZI1 Gm22183-201ENSMUST00000175420 73 ntBASIC-0,92□□□□□ -2,56
Sh3rf1Q69ZI1 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-0,93□□□□□ -2,56
Sh3rf1Q69ZI1 Gm23316-201ENSMUST00000157997 114 ntBASIC-0,97□□□□□ -2,56
Sh3rf1Q69ZI1 Mir379-201ENSMUST00000083564 66 ntBASIC-0,97□□□□□ -2,56
Sh3rf1Q69ZI1 Gm25521-201ENSMUST00000158393 108 ntBASIC-1□□□□□ -2,57
Sh3rf1Q69ZI1 Mir122-201ENSMUST00000083468 66 ntBASIC-1,01□□□□□ -2,57
Sh3rf1Q69ZI1 Gm22296-201ENSMUST00000083310 103 ntBASIC-1,02□□□□□ -2,57
Sh3rf1Q69ZI1 Gm23676-201ENSMUST00000157314 105 ntBASIC-1,03□□□□□ -2,57
Sh3rf1Q69ZI1 Gm23428-201ENSMUST00000122488 102 ntBASIC-1,04□□□□□ -2,58
Sh3rf1Q69ZI1 Mir493-201ENSMUST00000103837 83 ntBASIC-1,1□□□□□ -2,59
Sh3rf1Q69ZI1 Gm25867-201ENSMUST00000158254 103 ntBASIC-1,14□□□□□ -2,59
Retrieved 100 of 76,532 protein–RNA pairs in 96,3 ms