Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.08□□□□□ -2.58
Rnf180Q3U827 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.08□□□□□ -2.58
Rnf180Q3U827 Mir543-201ENSMUST00000102286 76 ntBASIC-1.09□□□□□ -2.58
Rnf180Q3U827 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.1□□□□□ -2.59
Rnf180Q3U827 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
Rnf180Q3U827 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
Rnf180Q3U827 Mir295-201ENSMUST00000104694 69 ntBASIC-1.12□□□□□ -2.59
Rnf180Q3U827 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.12□□□□□ -2.59
Rnf180Q3U827 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.14□□□□□ -2.59
Rnf180Q3U827 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.14□□□□□ -2.59
Rnf180Q3U827 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.14□□□□□ -2.59
Rnf180Q3U827 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.15□□□□□ -2.59
Rnf180Q3U827 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.15□□□□□ -2.59
Rnf180Q3U827 Mir367-201ENSMUST00000083479 75 ntBASIC-1.15□□□□□ -2.59
Rnf180Q3U827 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.17□□□□□ -2.6
Rnf180Q3U827 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.17□□□□□ -2.6
Rnf180Q3U827 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.18□□□□□ -2.6
Rnf180Q3U827 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.19□□□□□ -2.6
Rnf180Q3U827 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.21□□□□□ -2.6
Rnf180Q3U827 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
Rnf180Q3U827 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.23□□□□□ -2.61
Rnf180Q3U827 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.23□□□□□ -2.61
Rnf180Q3U827 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.23□□□□□ -2.61
Rnf180Q3U827 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.23□□□□□ -2.61
Rnf180Q3U827 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.24□□□□□ -2.61
Rnf180Q3U827 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.24□□□□□ -2.61
Rnf180Q3U827 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.25□□□□□ -2.61
Rnf180Q3U827 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
Rnf180Q3U827 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.27□□□□□ -2.61
Rnf180Q3U827 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.28□□□□□ -2.61
Rnf180Q3U827 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.32□□□□□ -2.62
Rnf180Q3U827 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.32□□□□□ -2.62
Rnf180Q3U827 Mir122-201ENSMUST00000083468 66 ntBASIC-1.32□□□□□ -2.62
Rnf180Q3U827 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.33□□□□□ -2.62
Rnf180Q3U827 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.34□□□□□ -2.62
Rnf180Q3U827 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.35□□□□□ -2.63
Rnf180Q3U827 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.38□□□□□ -2.63
Rnf180Q3U827 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.38□□□□□ -2.63
Rnf180Q3U827 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.39□□□□□ -2.63
Rnf180Q3U827 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.41□□□□□ -2.64
Rnf180Q3U827 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.42□□□□□ -2.64
Rnf180Q3U827 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.42□□□□□ -2.64
Rnf180Q3U827 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.42□□□□□ -2.64
Rnf180Q3U827 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.43□□□□□ -2.64
Rnf180Q3U827 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.43□□□□□ -2.64
Rnf180Q3U827 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.44□□□□□ -2.64
Rnf180Q3U827 Mir379-201ENSMUST00000083564 66 ntBASIC-1.45□□□□□ -2.64
Rnf180Q3U827 Mir192-201ENSMUST00000083589 89 ntBASIC-1.45□□□□□ -2.64
Rnf180Q3U827 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.46□□□□□ -2.64
Rnf180Q3U827 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.46□□□□□ -2.64
Rnf180Q3U827 Mir539-201ENSMUST00000102109 74 ntBASIC-1.5□□□□□ -2.65
Rnf180Q3U827 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.54□□□□□ -2.66
Rnf180Q3U827 Mir335-201ENSMUST00000083567 98 ntBASIC-1.54□□□□□ -2.66
Rnf180Q3U827 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.55□□□□□ -2.66
Rnf180Q3U827 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.55□□□□□ -2.66
Rnf180Q3U827 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.57□□□□□ -2.66
Rnf180Q3U827 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.57□□□□□ -2.66
Rnf180Q3U827 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.62□□□□□ -2.67
Rnf180Q3U827 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.64□□□□□ -2.67
Rnf180Q3U827 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.65□□□□□ -2.67
Rnf180Q3U827 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.66□□□□□ -2.68
Rnf180Q3U827 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.67□□□□□ -2.68
Rnf180Q3U827 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.67□□□□□ -2.68
Rnf180Q3U827 Gm22301-201ENSMUST00000082656 107 ntBASIC-1.67□□□□□ -2.68
Rnf180Q3U827 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.67□□□□□ -2.68
Rnf180Q3U827 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.68□□□□□ -2.68
Rnf180Q3U827 Mir351-201ENSMUST00000083569 99 ntBASIC-1.69□□□□□ -2.68
Rnf180Q3U827 Mir470-201ENSMUST00000093565 75 ntBASIC-1.69□□□□□ -2.68
Rnf180Q3U827 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.7□□□□□ -2.68
Rnf180Q3U827 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.7□□□□□ -2.68
Rnf180Q3U827 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.71□□□□□ -2.68
Rnf180Q3U827 Mir485-201ENSMUST00000093620 73 ntBASIC-1.72□□□□□ -2.68
Rnf180Q3U827 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.74□□□□□ -2.69
Rnf180Q3U827 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.76□□□□□ -2.69
Rnf180Q3U827 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.76□□□□□ -2.69
Rnf180Q3U827 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.77□□□□□ -2.69
Rnf180Q3U827 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.77□□□□□ -2.69
Rnf180Q3U827 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.79□□□□□ -2.7
Rnf180Q3U827 Gm26227-201ENSMUST00000082510 101 ntBASIC-1.79□□□□□ -2.7
Rnf180Q3U827 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.8□□□□□ -2.7
Rnf180Q3U827 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.8□□□□□ -2.7
Rnf180Q3U827 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.87□□□□□ -2.71
Rnf180Q3U827 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.87□□□□□ -2.71
Rnf180Q3U827 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.87□□□□□ -2.71
Rnf180Q3U827 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.88□□□□□ -2.71
Rnf180Q3U827 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.89□□□□□ -2.71
Rnf180Q3U827 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.91□□□□□ -2.72
Rnf180Q3U827 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.92□□□□□ -2.72
Rnf180Q3U827 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.93□□□□□ -2.72
Rnf180Q3U827 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.93□□□□□ -2.72
Rnf180Q3U827 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.95□□□□□ -2.72
Rnf180Q3U827 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.95□□□□□ -2.72
Rnf180Q3U827 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.98□□□□□ -2.73
Rnf180Q3U827 Gm26231-201ENSMUST00000175218 67 ntBASIC-2□□□□□ -2.73
Rnf180Q3U827 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.04□□□□□ -2.74
Rnf180Q3U827 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.05□□□□□ -2.74
Rnf180Q3U827 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.05□□□□□ -2.74
Rnf180Q3U827 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.07□□□□□ -2.74
Rnf180Q3U827 Mir493-201ENSMUST00000103837 83 ntBASIC-2.09□□□□□ -2.74
Rnf180Q3U827 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms