Protein–RNA interactions for Protein: P58774
Tpm2, Tropomyosin beta chain, mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Tpm2 | P58774 | Gm22879-201 | ENSMUST00000082895 | 74 nt | BASIC | -5,33 | □□□□□ -3,26 | | |
Tpm2 | P58774 | Gm26307-201 | ENSMUST00000157767 | 126 nt | BASIC | -5,35 | □□□□□ -3,27 | | |
Tpm2 | P58774 | Gm25847-201 | ENSMUST00000116793 | 96 nt | BASIC | -5,38 | □□□□□ -3,27 | | |
Tpm2 | P58774 | Gm25183-201 | ENSMUST00000157752 | 106 nt | BASIC | -5,38 | □□□□□ -3,27 | | |
Tpm2 | P58774 | Mir493-201 | ENSMUST00000103837 | 83 nt | BASIC | -5,4 | □□□□□ -3,27 | | |
Tpm2 | P58774 | Gm26052-201 | ENSMUST00000104646 | 84 nt | BASIC | -5,41 | □□□□□ -3,28 | | |
Tpm2 | P58774 | Mir2136-201 | ENSMUST00000158781 | 75 nt | BASIC | -5,5 | □□□□□ -3,29 | | |
Tpm2 | P58774 | Gm44339-201 | ENSMUST00000200598 | 84 nt | BASIC | -5,51 | □□□□□ -3,29 | | |
Tpm2 | P58774 | Gm27450-201 | ENSMUST00000104632 | 90 nt | BASIC | -5,57 | □□□□□ -3,3 | | |
Tpm2 | P58774 | Mir297a-2-201 | ENSMUST00000103795 | 90 nt | BASIC | -5,58 | □□□□□ -3,3 | | |
Tpm2 | P58774 | Gm25705-201 | ENSMUST00000083119 | 104 nt | BASIC | -5,58 | □□□□□ -3,3 | | |
Tpm2 | P58774 | Gm24605-201 | ENSMUST00000104772 | 96 nt | BASIC | -5,59 | □□□□□ -3,3 | | |
Tpm2 | P58774 | Mir1187-201 | ENSMUST00000116936 | 122 nt | BASIC | -5,61 | □□□□□ -3,31 | | |
Tpm2 | P58774 | Gm24590-201 | ENSMUST00000116699 | 119 nt | BASIC | -5,63 | □□□□□ -3,31 | | |
Tpm2 | P58774 | Gm27882-201 | ENSMUST00000184904 | 74 nt | BASIC | -5,63 | □□□□□ -3,31 | | |
Tpm2 | P58774 | Gm44353-201 | ENSMUST00000200618 | 138 nt | BASIC | -5,64 | □□□□□ -3,31 | | |
Tpm2 | P58774 | Mir154-201 | ENSMUST00000083514 | 66 nt | BASIC | -5,64 | □□□□□ -3,31 | | |
Tpm2 | P58774 | AC157278.1-201 | ENSMUST00000221621 | 148 nt | BASIC | -5,65 | □□□□□ -3,31 | | |
Tpm2 | P58774 | Mir1955-201 | ENSMUST00000158014 | 98 nt | BASIC | -5,68 | □□□□□ -3,32 | | |
Tpm2 | P58774 | Gm26485-201 | ENSMUST00000158019 | 64 nt | BASIC | -5,68 | □□□□□ -3,32 | | |
Tpm2 | P58774 | Gm22056-201 | ENSMUST00000083386 | 81 nt | BASIC | -5,69 | □□□□□ -3,32 | | |
Tpm2 | P58774 | Gm26139-201 | ENSMUST00000180098 | 107 nt | BASIC | -5,7 | □□□□□ -3,32 | | |
Tpm2 | P58774 | Mir450b-201 | ENSMUST00000102095 | 82 nt | BASIC | -5,71 | □□□□□ -3,32 | | |
Tpm2 | P58774 | Gm24226-201 | ENSMUST00000158826 | 97 nt | BASIC | -5,71 | □□□□□ -3,32 | | |
Tpm2 | P58774 | Gm23678-201 | ENSMUST00000083157 | 107 nt | BASIC | -5,72 | □□□□□ -3,33 | | |
Tpm2 | P58774 | Gm23676-201 | ENSMUST00000157314 | 105 nt | BASIC | -5,73 | □□□□□ -3,33 | | |
Tpm2 | P58774 | Mir664-201 | ENSMUST00000196796 | 69 nt | BASIC | -5,74 | □□□□□ -3,33 | | |
Tpm2 | P58774 | Mir125b-1-201 | ENSMUST00000175613 | 77 nt | BASIC | -5,75 | □□□□□ -3,33 | | |
Tpm2 | P58774 | Gm20734-201 | ENSMUST00000216939 | 193 nt | BASIC | -5,76 | □□□□□ -3,33 | | |
Tpm2 | P58774 | Gm25681-201 | ENSMUST00000083938 | 106 nt | BASIC | -5,77 | □□□□□ -3,33 | | |
Tpm2 | P58774 | Gm24651-201 | ENSMUST00000157107 | 107 nt | BASIC | -5,78 | □□□□□ -3,33 | | |
Tpm2 | P58774 | Gm22845-201 | ENSMUST00000157712 | 104 nt | BASIC | -5,79 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Mir1912-201 | ENSMUST00000175298 | 87 nt | BASIC | -5,79 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Gm11966-201 | ENSMUST00000119907 | 87 nt | BASIC | -5,8 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Gm25987-201 | ENSMUST00000083234 | 107 nt | BASIC | -5,8 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Mir1906-1-201 | ENSMUST00000122586 | 80 nt | BASIC | -5,82 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Mir1906-2-201 | ENSMUST00000122610 | 80 nt | BASIC | -5,82 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Gm22401-201 | ENSMUST00000174927 | 117 nt | BASIC | -5,82 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Gm24148-201 | ENSMUST00000082762 | 80 nt | BASIC | -5,82 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Gm22251-201 | ENSMUST00000083216 | 107 nt | BASIC | -5,84 | □□□□□ -3,34 | | |
Tpm2 | P58774 | Gm22260-201 | ENSMUST00000178643 | 107 nt | BASIC | -5,86 | □□□□□ -3,35 | | |
Tpm2 | P58774 | Gm22039-201 | ENSMUST00000157278 | 132 nt | BASIC | -5,88 | □□□□□ -3,35 | | |
Tpm2 | P58774 | Mir124a-1-201 | ENSMUST00000083663 | 85 nt | BASIC | -5,88 | □□□□□ -3,35 | | |
Tpm2 | P58774 | AL929417.1-201 | ENSMUST00000214901 | 124 nt | BASIC | -5,9 | □□□□□ -3,35 | | |
Tpm2 | P58774 | Gm22925-201 | ENSMUST00000174956 | 102 nt | BASIC | -5,92 | □□□□□ -3,36 | | |
Tpm2 | P58774 | Gm23652-201 | ENSMUST00000116752 | 107 nt | BASIC | -5,93 | □□□□□ -3,36 | | |
Tpm2 | P58774 | Gm22071-201 | ENSMUST00000116857 | 83 nt | BASIC | -5,95 | □□□□□ -3,36 | | |
Tpm2 | P58774 | Snord50a-201 | ENSMUST00000178154 | 72 nt | BASIC | -5,95 | □□□□□ -3,36 | | |
Tpm2 | P58774 | Gm24463-201 | ENSMUST00000178417 | 72 nt | BASIC | -5,95 | □□□□□ -3,36 | | |
Tpm2 | P58774 | Gm25465-201 | ENSMUST00000157716 | 105 nt | BASIC | -5,96 | □□□□□ -3,36 | | |
Tpm2 | P58774 | Gm24710-201 | ENSMUST00000175235 | 101 nt | BASIC | -5,99 | □□□□□ -3,37 | | |
Tpm2 | P58774 | Gm24135-201 | ENSMUST00000179085 | 101 nt | BASIC | -5,99 | □□□□□ -3,37 | | |
Tpm2 | P58774 | Gm25815-201 | ENSMUST00000082755 | 107 nt | BASIC | -6 | □□□□□ -3,37 | | |
Tpm2 | P58774 | Gm25222-201 | ENSMUST00000158199 | 126 nt | BASIC | -6,03 | □□□□□ -3,37 | | |
Tpm2 | P58774 | Gm23785-201 | ENSMUST00000116741 | 96 nt | BASIC | -6,04 | □□□□□ -3,38 | | |
Tpm2 | P58774 | Gm25867-201 | ENSMUST00000158254 | 103 nt | BASIC | -6,06 | □□□□□ -3,38 | | |
Tpm2 | P58774 | Gm23038-201 | ENSMUST00000083873 | 104 nt | BASIC | -6,06 | □□□□□ -3,38 | | |
Tpm2 | P58774 | n-R5s155-201 | ENSMUST00000122531 | 113 nt | BASIC | -6,17 | □□□□□ -3,4 | | |
Tpm2 | P58774 | Gm26008-201 | ENSMUST00000158797 | 99 nt | BASIC | -6,18 | □□□□□ -3,4 | | |
Tpm2 | P58774 | Mir669a-3-201 | ENSMUST00000102074 | 109 nt | BASIC | -6,19 | □□□□□ -3,4 | | |
Tpm2 | P58774 | Mir466b-2-201 | ENSMUST00000103778 | 82 nt | BASIC | -6,19 | □□□□□ -3,4 | | |
Tpm2 | P58774 | Gm23293-201 | ENSMUST00000082552 | 104 nt | BASIC | -6,19 | □□□□□ -3,4 | | |
Tpm2 | P58774 | Snord58b-201 | ENSMUST00000082937 | 66 nt | BASIC | -6,2 | □□□□□ -3,4 | | |
Tpm2 | P58774 | Gm22381-201 | ENSMUST00000158186 | 107 nt | BASIC | -6,28 | □□□□□ -3,41 | | |
Tpm2 | P58774 | Gm22950-201 | ENSMUST00000082776 | 107 nt | BASIC | -6,28 | □□□□□ -3,41 | | |
Tpm2 | P58774 | Gm25382-201 | ENSMUST00000157811 | 97 nt | BASIC | -6,31 | □□□□□ -3,42 | | |
Tpm2 | P58774 | Gm22078-201 | ENSMUST00000157593 | 103 nt | BASIC | -6,36 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Gm22474-201 | ENSMUST00000179407 | 107 nt | BASIC | -6,36 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Gm25022-201 | ENSMUST00000102205 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-6-201 | ENSMUST00000177790 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-3-201 | ENSMUST00000178082 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-7-201 | ENSMUST00000178635 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-10-201 | ENSMUST00000179320 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-5-201 | ENSMUST00000179352 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-2-201 | ENSMUST00000179447 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-9-201 | ENSMUST00000179752 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-4-201 | ENSMUST00000179923 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | Mir467a-8-201 | ENSMUST00000180070 | 83 nt | BASIC | -6,37 | □□□□□ -3,43 | | |
Tpm2 | P58774 | mt-Tl2-201 | ENSMUST00000082417 | 71 nt | BASIC | -6,42 | □□□□□ -3,44 | | |
Tpm2 | P58774 | Gm24482-201 | ENSMUST00000117005 | 93 nt | BASIC | -6,49 | □□□□□ -3,45 | | |
Tpm2 | P58774 | Gm26306-201 | ENSMUST00000157773 | 119 nt | BASIC | -6,52 | □□□□□ -3,45 | | |
Tpm2 | P58774 | Gm24387-201 | ENSMUST00000104625 | 90 nt | BASIC | -6,55 | □□□□□ -3,46 | | |
Tpm2 | P58774 | Gm26227-201 | ENSMUST00000082510 | 101 nt | BASIC | -6,56 | □□□□□ -3,46 | | |
Tpm2 | P58774 | Gm22679-201 | ENSMUST00000116975 | 100 nt | BASIC | -6,6 | □□□□□ -3,47 | | |
Tpm2 | P58774 | n-R5s218-201 | ENSMUST00000122583 | 109 nt | BASIC | -6,62 | □□□□□ -3,47 | | |
Tpm2 | P58774 | Gm24410-201 | ENSMUST00000083433 | 107 nt | BASIC | -6,62 | □□□□□ -3,47 | | |
Tpm2 | P58774 | Traj42-201 | ENSMUST00000103700 | 64 nt | APPRIS P1 BASIC | -6,64 | □□□□□ -3,47 | | |
Tpm2 | P58774 | Gm10563-201 | ENSMUST00000115821 | 237 nt | APPRIS P1 TSL 5 BASIC | -6,7 | □□□□□ -3,48 | | |
Tpm2 | P58774 | Gm23961-201 | ENSMUST00000104685 | 97 nt | BASIC | -6,71 | □□□□□ -3,48 | | |
Tpm2 | P58774 | Gm25428-201 | ENSMUST00000157608 | 114 nt | BASIC | -6,73 | □□□□□ -3,49 | | |
Tpm2 | P58774 | Gm27671-201 | ENSMUST00000183739 | 66 nt | BASIC | -6,76 | □□□□□ -3,49 | | |
Tpm2 | P58774 | Mir7681-201 | ENSMUST00000184834 | 72 nt | BASIC | -6,78 | □□□□□ -3,49 | | |
Tpm2 | P58774 | Gm24586-201 | ENSMUST00000116695 | 89 nt | BASIC | -6,83 | □□□□□ -3,5 | | |
Tpm2 | P58774 | Gm22301-201 | ENSMUST00000082656 | 107 nt | BASIC | -6,88 | □□□□□ -3,51 | | |
Tpm2 | P58774 | Gm22127-201 | ENSMUST00000083239 | 106 nt | BASIC | -6,9 | □□□□□ -3,51 | | |
Tpm2 | P58774 | Gm22550-201 | ENSMUST00000179774 | 107 nt | BASIC | -6,96 | □□□□□ -3,52 | | |
Tpm2 | P58774 | Gm22060-201 | ENSMUST00000082558 | 107 nt | BASIC | -6,96 | □□□□□ -3,52 | | |
Tpm2 | P58774 | Gm23653-201 | ENSMUST00000116751 | 97 nt | BASIC | -7 | □□□□□ -3,53 | | |
Tpm2 | P58774 | Mir34c-201 | ENSMUST00000083653 | 77 nt | BASIC | -7,02 | □□□□□ -3,53 | | |
Tpm2 | P58774 | Gm23210-201 | ENSMUST00000158668 | 98 nt | BASIC | -7,03 | □□□□□ -3,53 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 28,4 ms