Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm24226-201ENSMUST00000158826 97 ntBASIC-2.89□□□□□ -2.87
Sdc1P18828 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.89□□□□□ -2.87
Sdc1P18828 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.9□□□□□ -2.87
Sdc1P18828 Mir450b-201ENSMUST00000102095 82 ntBASIC-2.91□□□□□ -2.88
Sdc1P18828 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-2.91□□□□□ -2.88
Sdc1P18828 Mir351-201ENSMUST00000083569 99 ntBASIC-2.92□□□□□ -2.88
Sdc1P18828 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.93□□□□□ -2.88
Sdc1P18828 Gm26485-201ENSMUST00000158019 64 ntBASIC-2.94□□□□□ -2.88
Sdc1P18828 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.95□□□□□ -2.88
Sdc1P18828 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.96□□□□□ -2.88
Sdc1P18828 Gm22845-201ENSMUST00000157712 104 ntBASIC-2.97□□□□□ -2.88
Sdc1P18828 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.98□□□□□ -2.89
Sdc1P18828 Gm24605-201ENSMUST00000104772 96 ntBASIC-2.99□□□□□ -2.89
Sdc1P18828 Gm22842-201ENSMUST00000157709 118 ntBASIC-2.99□□□□□ -2.89
Sdc1P18828 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.99□□□□□ -2.89
Sdc1P18828 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.99□□□□□ -2.89
Sdc1P18828 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.99□□□□□ -2.89
Sdc1P18828 Mir493-201ENSMUST00000103837 83 ntBASIC-3.02□□□□□ -2.89
Sdc1P18828 Mir1187-201ENSMUST00000116936 122 ntBASIC-3.02□□□□□ -2.89
Sdc1P18828 Gm25987-201ENSMUST00000083234 107 ntBASIC-3.02□□□□□ -2.89
Sdc1P18828 Gm23652-201ENSMUST00000116752 107 ntBASIC-3.03□□□□□ -2.89
Sdc1P18828 Gm20734-201ENSMUST00000216939 193 ntBASIC-3.03□□□□□ -2.89
Sdc1P18828 Gm24148-201ENSMUST00000082762 80 ntBASIC-3.04□□□□□ -2.9
Sdc1P18828 Gm26307-201ENSMUST00000157767 126 ntBASIC-3.05□□□□□ -2.9
Sdc1P18828 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-3.06□□□□□ -2.9
Sdc1P18828 Gm23785-201ENSMUST00000116741 96 ntBASIC-3.07□□□□□ -2.9
Sdc1P18828 Gm23678-201ENSMUST00000083157 107 ntBASIC-3.07□□□□□ -2.9
Sdc1P18828 Gm22056-201ENSMUST00000083386 81 ntBASIC-3.07□□□□□ -2.9
Sdc1P18828 Gm22039-201ENSMUST00000157278 132 ntBASIC-3.09□□□□□ -2.9
Sdc1P18828 Mir1955-201ENSMUST00000158014 98 ntBASIC-3.09□□□□□ -2.9
Sdc1P18828 Gm44339-201ENSMUST00000200598 84 ntBASIC-3.09□□□□□ -2.9
Sdc1P18828 Gm24651-201ENSMUST00000157107 107 ntBASIC-3.11□□□□□ -2.91
Sdc1P18828 Gm25815-201ENSMUST00000082755 107 ntBASIC-3.12□□□□□ -2.91
Sdc1P18828 Gm25705-201ENSMUST00000083119 104 ntBASIC-3.12□□□□□ -2.91
Sdc1P18828 Gm25681-201ENSMUST00000083938 106 ntBASIC-3.12□□□□□ -2.91
Sdc1P18828 Snord50a-201ENSMUST00000178154 72 ntBASIC-3.13□□□□□ -2.91
Sdc1P18828 Gm24463-201ENSMUST00000178417 72 ntBASIC-3.13□□□□□ -2.91
Sdc1P18828 Gm22260-201ENSMUST00000178643 107 ntBASIC-3.13□□□□□ -2.91
Sdc1P18828 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.14□□□□□ -2.91
Sdc1P18828 Gm25222-201ENSMUST00000158199 126 ntBASIC-3.15□□□□□ -2.91
Sdc1P18828 Gm23293-201ENSMUST00000082552 104 ntBASIC-3.15□□□□□ -2.91
Sdc1P18828 Gm22401-201ENSMUST00000174927 117 ntBASIC-3.16□□□□□ -2.92
Sdc1P18828 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.17□□□□□ -2.92
Sdc1P18828 Mir664-201ENSMUST00000196796 69 ntBASIC-3.19□□□□□ -2.92
Sdc1P18828 Gm22251-201ENSMUST00000083216 107 ntBASIC-3.19□□□□□ -2.92
Sdc1P18828 Gm25465-201ENSMUST00000157716 105 ntBASIC-3.2□□□□□ -2.92
Sdc1P18828 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-3.21□□□□□ -2.92
Sdc1P18828 Gm27882-201ENSMUST00000184904 74 ntBASIC-3.21□□□□□ -2.92
Sdc1P18828 Gm24710-201ENSMUST00000175235 101 ntBASIC-3.23□□□□□ -2.93
Sdc1P18828 Gm24135-201ENSMUST00000179085 101 ntBASIC-3.23□□□□□ -2.93
Sdc1P18828 Mir154-201ENSMUST00000083514 66 ntBASIC-3.23□□□□□ -2.93
Sdc1P18828 Gm25382-201ENSMUST00000157811 97 ntBASIC-3.24□□□□□ -2.93
Sdc1P18828 Gm23038-201ENSMUST00000083873 104 ntBASIC-3.24□□□□□ -2.93
Sdc1P18828 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-3.25□□□□□ -2.93
Sdc1P18828 Gm22925-201ENSMUST00000174956 102 ntBASIC-3.27□□□□□ -2.93
Sdc1P18828 Gm22950-201ENSMUST00000082776 107 ntBASIC-3.28□□□□□ -2.93
Sdc1P18828 Snord58b-201ENSMUST00000082937 66 ntBASIC-3.29□□□□□ -2.94
Sdc1P18828 Gm22078-201ENSMUST00000157593 103 ntBASIC-3.31□□□□□ -2.94
Sdc1P18828 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-3.32□□□□□ -2.94
Sdc1P18828 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-3.33□□□□□ -2.94
Sdc1P18828 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-3.33□□□□□ -2.94
Sdc1P18828 Gm22474-201ENSMUST00000179407 107 ntBASIC-3.34□□□□□ -2.94
Sdc1P18828 Gm22679-201ENSMUST00000116975 100 ntBASIC-3.35□□□□□ -2.95
Sdc1P18828 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.35□□□□□ -2.95
Sdc1P18828 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-3.37□□□□□ -2.95
Sdc1P18828 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-3.38□□□□□ -2.95
Sdc1P18828 Gm22381-201ENSMUST00000158186 107 ntBASIC-3.39□□□□□ -2.95
Sdc1P18828 Gm22071-201ENSMUST00000116857 83 ntBASIC-3.4□□□□□ -2.95
Sdc1P18828 Gm25867-201ENSMUST00000158254 103 ntBASIC-3.4□□□□□ -2.95
Sdc1P18828 Mir1912-201ENSMUST00000175298 87 ntBASIC-3.4□□□□□ -2.95
Sdc1P18828 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-3.43□□□□□ -2.96
Sdc1P18828 Gm25022-201ENSMUST00000102205 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-3.46□□□□□ -2.96
Sdc1P18828 Gm24482-201ENSMUST00000117005 93 ntBASIC-3.47□□□□□ -2.96
Sdc1P18828 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.48□□□□□ -2.97
Sdc1P18828 Gm24410-201ENSMUST00000083433 107 ntBASIC-3.48□□□□□ -2.97
Sdc1P18828 Gm23961-201ENSMUST00000104685 97 ntBASIC-3.52□□□□□ -2.97
Sdc1P18828 Gm26227-201ENSMUST00000082510 101 ntBASIC-3.52□□□□□ -2.97
Sdc1P18828 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.54□□□□□ -2.98
Sdc1P18828 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.6□□□□□ -2.99
Sdc1P18828 Mir466l-201ENSMUST00000104866 121 ntBASIC-3.63□□□□□ -2.99
Sdc1P18828 Gm24586-201ENSMUST00000116695 89 ntBASIC-3.67□□□□□ -3
Sdc1P18828 Gm25428-201ENSMUST00000157608 114 ntBASIC-3.67□□□□□ -3
Sdc1P18828 Gm22301-201ENSMUST00000082656 107 ntBASIC-3.69□□□□□ -3
Sdc1P18828 Mir34c-201ENSMUST00000083653 77 ntBASIC-3.71□□□□□ -3
Sdc1P18828 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.72□□□□□ -3
Sdc1P18828 Gm22127-201ENSMUST00000083239 106 ntBASIC-3.73□□□□□ -3.01
Sdc1P18828 Gm22550-201ENSMUST00000179774 107 ntBASIC-3.75□□□□□ -3.01
Sdc1P18828 Mir7681-201ENSMUST00000184834 72 ntBASIC-3.75□□□□□ -3.01
Sdc1P18828 Gm22060-201ENSMUST00000082558 107 ntBASIC-3.75□□□□□ -3.01
Sdc1P18828 Gm27671-201ENSMUST00000183739 66 ntBASIC-3.8□□□□□ -3.02
Sdc1P18828 Gm23653-201ENSMUST00000116751 97 ntBASIC-3.84□□□□□ -3.02
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms