Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL512637.1-201ENST00000439523 1231 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC004129.2-201ENST00000457229 287 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 RN7SL72P-201ENST00000460697 269 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 RN7SL570P-201ENST00000484405 292 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 COX6B1P2-201ENST00000489624 230 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC023424.1-201ENST00000496058 459 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 RNU6-513P-201ENST00000516104 104 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AL096712.1-201ENST00000614561 159 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AL353684.1-201ENST00000622677 1120 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 AC103703.1-201ENST00000634783 663 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 MTND5P12-201ENST00000502851 1449 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 MFSD8-239ENST00000641590 2479 ntBASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRAPPC4Q9Y296 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 SLC20A1P1-201ENST00000413906 956 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AL133482.1-201ENST00000415988 498 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 CDY8P-201ENST00000428380 1279 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 HMGN1P2-201ENST00000445197 310 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 CDY20P-201ENST00000447528 1279 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 OR7E116P-201ENST00000448529 957 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AP006222.1-205ENST00000450734 457 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 MEMO1P4-201ENST00000453590 386 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC011476.1-201ENST00000466725 307 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 USP9YP2-201ENST00000504503 1000 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 USP9YP1-201ENST00000513521 1002 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC068305.2-201ENST00000550567 1205 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 HMGN2P47-201ENST00000559378 272 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC106730.2-201ENST00000566641 540 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC092121.1-201ENST00000569452 202 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AL365181.4-201ENST00000609800 547 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC010632.3-201ENST00000611377 369 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 MIR1910-201ENST00000636955 80 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC026523.2-201ENST00000625039 7739 ntBASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAPPC4Q9Y296 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 MFSD8-219ENST00000641228 2559 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AL442128.2-201ENST00000620246 1824 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms