Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm24323-201ENSMUST00000175342 77 ntBASIC0.67□□□□□ -2.3
Trim35Q8C006 Mir672-201ENSMUST00000102331 100 ntBASIC0.66□□□□□ -2.3
Trim35Q8C006 Gm24003-201ENSMUST00000158455 100 ntBASIC0.66□□□□□ -2.3
Trim35Q8C006 Gm27475-201ENSMUST00000183420 61 ntBASIC0.65□□□□□ -2.31
Trim35Q8C006 Mir8107-201ENSMUST00000184024 117 ntBASIC0.64□□□□□ -2.31
Trim35Q8C006 Mir466b-2-201ENSMUST00000103778 82 ntBASIC0.63□□□□□ -2.31
Trim35Q8C006 Gm25225-201ENSMUST00000158197 102 ntBASIC0.63□□□□□ -2.31
Trim35Q8C006 Gm25497-201ENSMUST00000104425 132 ntBASIC0.62□□□□□ -2.31
Trim35Q8C006 Mir6957-201ENSMUST00000183708 64 ntBASIC0.62□□□□□ -2.31
Trim35Q8C006 Gm26262-201ENSMUST00000158024 127 ntBASIC0.6□□□□□ -2.31
Trim35Q8C006 Gm26285-201ENSMUST00000177923 107 ntBASIC0.6□□□□□ -2.31
Trim35Q8C006 Gm23622-201ENSMUST00000082460 107 ntBASIC0.6□□□□□ -2.31
Trim35Q8C006 Gm25254-201ENSMUST00000157239 104 ntBASIC0.59□□□□□ -2.31
Trim35Q8C006 Snord16a-201ENSMUST00000083895 99 ntBASIC0.59□□□□□ -2.31
Trim35Q8C006 Gm23531-201ENSMUST00000104567 68 ntBASIC0.56□□□□□ -2.32
Trim35Q8C006 Gm23199-201ENSMUST00000158812 107 ntBASIC0.56□□□□□ -2.32
Trim35Q8C006 Gm24467-201ENSMUST00000157887 126 ntBASIC0.55□□□□□ -2.32
Trim35Q8C006 Mir216a-201ENSMUST00000083605 72 ntBASIC0.55□□□□□ -2.32
Trim35Q8C006 Gm25429-201ENSMUST00000157607 132 ntBASIC0.54□□□□□ -2.32
Trim35Q8C006 Gm26210-201ENSMUST00000158680 91 ntBASIC0.54□□□□□ -2.32
Trim35Q8C006 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.54□□□□□ -2.32
Trim35Q8C006 Gm23994-201ENSMUST00000158059 88 ntBASIC0.53□□□□□ -2.32
Trim35Q8C006 Gm25712-201ENSMUST00000158634 93 ntBASIC0.53□□□□□ -2.32
Trim35Q8C006 Mir7094-2-201ENSMUST00000184622 60 ntBASIC0.52□□□□□ -2.33
Trim35Q8C006 Gm43432-201ENSMUST00000196352 121 ntBASIC0.52□□□□□ -2.33
Trim35Q8C006 Mir7094-1-201ENSMUST00000199671 60 ntBASIC0.52□□□□□ -2.33
Trim35Q8C006 Snord85-201ENSMUST00000083262 73 ntBASIC0.52□□□□□ -2.33
Trim35Q8C006 n-R5s171-201ENSMUST00000104128 79 ntBASIC0.5□□□□□ -2.33
Trim35Q8C006 Gm23605-201ENSMUST00000157255 127 ntBASIC0.5□□□□□ -2.33
Trim35Q8C006 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.5□□□□□ -2.33
Trim35Q8C006 Gm22573-201ENSMUST00000082982 102 ntBASIC0.5□□□□□ -2.33
Trim35Q8C006 Gm24455-201ENSMUST00000083348 131 ntBASIC0.5□□□□□ -2.33
Trim35Q8C006 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.5□□□□□ -2.33
Trim35Q8C006 Gm24775-201ENSMUST00000157377 99 ntBASIC0.49□□□□□ -2.33
Trim35Q8C006 Gm24833-201ENSMUST00000116775 120 ntBASIC0.47□□□□□ -2.33
Trim35Q8C006 Gm25472-201ENSMUST00000175454 78 ntBASIC0.47□□□□□ -2.33
Trim35Q8C006 Gm25493-201ENSMUST00000157375 103 ntBASIC0.45□□□□□ -2.34
Trim35Q8C006 Gm22013-201ENSMUST00000158788 103 ntBASIC0.45□□□□□ -2.34
Trim35Q8C006 Mir141-201ENSMUST00000083540 72 ntBASIC0.45□□□□□ -2.34
Trim35Q8C006 Gm22088-201ENSMUST00000158341 117 ntBASIC0.44□□□□□ -2.34
Trim35Q8C006 Gm19248-201ENSMUST00000209404 110 ntBASIC0.44□□□□□ -2.34
Trim35Q8C006 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.44□□□□□ -2.34
Trim35Q8C006 Gm22327-201ENSMUST00000158899 108 ntBASIC0.43□□□□□ -2.34
Trim35Q8C006 Mir7077-201ENSMUST00000183991 57 ntBASIC0.43□□□□□ -2.34
Trim35Q8C006 Gm26116-201ENSMUST00000175600 77 ntBASIC0.42□□□□□ -2.34
Trim35Q8C006 Gm44828-201ENSMUST00000203745 106 ntBASIC0.42□□□□□ -2.34
Trim35Q8C006 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Trim35Q8C006 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Trim35Q8C006 Gm24381-201ENSMUST00000122697 104 ntBASIC0.36□□□□□ -2.35
Trim35Q8C006 Gm25885-201ENSMUST00000157779 109 ntBASIC0.36□□□□□ -2.35
Trim35Q8C006 Gm25032-201ENSMUST00000175411 84 ntBASIC0.36□□□□□ -2.35
Trim35Q8C006 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.36□□□□□ -2.35
Trim35Q8C006 Gm25952-201ENSMUST00000175329 74 ntBASIC0.34□□□□□ -2.36
Trim35Q8C006 Mir3089-201ENSMUST00000175350 84 ntBASIC0.34□□□□□ -2.36
Trim35Q8C006 Mir6904-201ENSMUST00000183443 67 ntBASIC0.34□□□□□ -2.36
Trim35Q8C006 mt-Ts1-201ENSMUST00000082403 69 ntBASIC0.34□□□□□ -2.36
Trim35Q8C006 Mir7038-201ENSMUST00000184833 71 ntBASIC0.33□□□□□ -2.36
Trim35Q8C006 Gm25867-201ENSMUST00000158254 103 ntBASIC0.32□□□□□ -2.36
Trim35Q8C006 Mir710-201ENSMUST00000102088 110 ntBASIC0.31□□□□□ -2.36
Trim35Q8C006 Gm23749-201ENSMUST00000104223 131 ntBASIC0.31□□□□□ -2.36
Trim35Q8C006 Gm22324-201ENSMUST00000158903 114 ntBASIC0.31□□□□□ -2.36
Trim35Q8C006 Gm23308-201ENSMUST00000179475 107 ntBASIC0.3□□□□□ -2.36
Trim35Q8C006 Gm27366-201ENSMUST00000184967 108 ntBASIC0.3□□□□□ -2.36
Trim35Q8C006 Gm24793-201ENSMUST00000104289 132 ntBASIC0.29□□□□□ -2.36
Trim35Q8C006 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.28□□□□□ -2.36
Trim35Q8C006 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Trim35Q8C006 Gm25596-201ENSMUST00000178368 107 ntBASIC0.28□□□□□ -2.36
Trim35Q8C006 Gm22368-201ENSMUST00000102416 109 ntBASIC0.26□□□□□ -2.37
Trim35Q8C006 Gm24051-201ENSMUST00000158622 75 ntBASIC0.26□□□□□ -2.37
Trim35Q8C006 Gm25601-201ENSMUST00000158356 105 ntBASIC0.23□□□□□ -2.37
Trim35Q8C006 Gm22962-201ENSMUST00000157962 73 ntBASIC0.22□□□□□ -2.37
Trim35Q8C006 Gm23166-201ENSMUST00000157164 101 ntBASIC0.19□□□□□ -2.38
Trim35Q8C006 Mir677-202ENSMUST00000197076 78 ntBASIC0.19□□□□□ -2.38
Trim35Q8C006 Gm22813-201ENSMUST00000199948 123 ntBASIC0.19□□□□□ -2.38
Trim35Q8C006 Mir382-201ENSMUST00000083494 76 ntBASIC0.19□□□□□ -2.38
Trim35Q8C006 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Trim35Q8C006 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Trim35Q8C006 Mir96-201ENSMUST00000083652 106 ntBASIC0.15□□□□□ -2.39
Trim35Q8C006 Gm25772-201ENSMUST00000158574 56 ntBASIC0.14□□□□□ -2.39
Trim35Q8C006 Mir7057-201ENSMUST00000184685 58 ntBASIC0.14□□□□□ -2.39
Trim35Q8C006 Gm22296-201ENSMUST00000083310 103 ntBASIC0.14□□□□□ -2.39
Trim35Q8C006 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.13□□□□□ -2.39
Trim35Q8C006 Gm26395-201ENSMUST00000104094 132 ntBASIC0.12□□□□□ -2.39
Trim35Q8C006 Gm24903-201ENSMUST00000158131 126 ntBASIC0.12□□□□□ -2.39
Trim35Q8C006 Gm25108-201ENSMUST00000122473 78 ntBASIC0.11□□□□□ -2.39
Trim35Q8C006 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.11□□□□□ -2.39
Trim35Q8C006 Gm26124-201ENSMUST00000083359 108 ntBASIC0.11□□□□□ -2.39
Trim35Q8C006 Snora16a-201ENSMUST00000083163 136 ntBASIC0.09□□□□□ -2.4
Trim35Q8C006 Mir493-201ENSMUST00000103837 83 ntBASIC0.08□□□□□ -2.4
Trim35Q8C006 Gm23918-201ENSMUST00000175253 106 ntBASIC0.08□□□□□ -2.4
Trim35Q8C006 Snord123-201ENSMUST00000158692 71 ntBASIC0.07□□□□□ -2.4
Trim35Q8C006 Gm26008-201ENSMUST00000158797 99 ntBASIC0.07□□□□□ -2.4
Trim35Q8C006 Gm23428-201ENSMUST00000122488 102 ntBASIC0.06□□□□□ -2.4
Trim35Q8C006 Mir191-201ENSMUST00000196210 74 ntBASIC0.06□□□□□ -2.4
Trim35Q8C006 Mir6915-201ENSMUST00000198839 69 ntBASIC0.06□□□□□ -2.4
Trim35Q8C006 Gm23248-201ENSMUST00000083367 108 ntBASIC0.06□□□□□ -2.4
Trim35Q8C006 Gm26043-201ENSMUST00000116912 91 ntBASIC0.05□□□□□ -2.4
Trim35Q8C006 Gm22757-201ENSMUST00000102279 96 ntBASIC0.04□□□□□ -2.4
Trim35Q8C006 Gm45688-201ENSMUST00000210002 101 ntBASIC0.04□□□□□ -2.4
Trim35Q8C006 Mir145a-201ENSMUST00000083658 70 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 179.1 ms