Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm22368-201ENSMUST00000102416 109 ntBASIC0,06□□□□□ -2,4
Trim28Q62318 Gm24336-201ENSMUST00000104203 146 ntBASIC0,06□□□□□ -2,4
Trim28Q62318 Gm22077-201ENSMUST00000157594 93 ntBASIC0,06□□□□□ -2,4
Trim28Q62318 Gm22757-201ENSMUST00000102279 96 ntBASIC0,05□□□□□ -2,4
Trim28Q62318 Gm45688-201ENSMUST00000210002 101 ntBASIC0,05□□□□□ -2,4
Trim28Q62318 Gm25703-201ENSMUST00000083123 151 ntBASIC0,05□□□□□ -2,4
Trim28Q62318 Mir191-201ENSMUST00000196210 74 ntBASIC0,04□□□□□ -2,4
Trim28Q62318 Gm25249-201ENSMUST00000175471 78 ntBASIC0,03□□□□□ -2,4
Trim28Q62318 Mir6915-201ENSMUST00000198839 69 ntBASIC0,03□□□□□ -2,4
Trim28Q62318 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0,02□□□□□ -2,41
Trim28Q62318 Snord58b-201ENSMUST00000082937 66 ntBASIC0,02□□□□□ -2,41
Trim28Q62318 Gm22602-201ENSMUST00000157596 95 ntBASIC0,01□□□□□ -2,41
Trim28Q62318 Gm44347-201ENSMUST00000199602 108 ntBASIC0,01□□□□□ -2,41
Trim28Q62318 Gm45374-201ENSMUST00000211388 136 ntBASIC0,01□□□□□ -2,41
Trim28Q62318 Gm22593-201ENSMUST00000104245 109 ntBASIC0□□□□□ -2,41
Trim28Q62318 Gm22489-201ENSMUST00000116813 62 ntBASIC0□□□□□ -2,41
Trim28Q62318 Mir466m-201ENSMUST00000175052 84 ntBASIC0□□□□□ -2,41
Trim28Q62318 Mir7094-2-201ENSMUST00000184622 60 ntBASIC0□□□□□ -2,41
Trim28Q62318 Mir7094-1-201ENSMUST00000199671 60 ntBASIC0□□□□□ -2,41
Trim28Q62318 Gm24256-201ENSMUST00000083696 84 ntBASIC0□□□□□ -2,41
Trim28Q62318 Gm22324-201ENSMUST00000158903 114 ntBASIC-0,01□□□□□ -2,41
Trim28Q62318 Gm25472-201ENSMUST00000175454 78 ntBASIC-0,01□□□□□ -2,41
Trim28Q62318 Gm22813-201ENSMUST00000199948 123 ntBASIC-0,01□□□□□ -2,41
Trim28Q62318 Gm22942-201ENSMUST00000158563 124 ntBASIC-0,02□□□□□ -2,41
Trim28Q62318 Gm23690-201ENSMUST00000083036 94 ntBASIC-0,02□□□□□ -2,41
Trim28Q62318 Mir7038-201ENSMUST00000184833 71 ntBASIC-0,03□□□□□ -2,41
Trim28Q62318 Mir136-201ENSMUST00000199494 62 ntBASIC-0,03□□□□□ -2,41
Trim28Q62318 Mir28c-201ENSMUST00000200096 75 ntBASIC-0,03□□□□□ -2,41
Trim28Q62318 Snord49b-201ENSMUST00000082503 72 ntBASIC-0,03□□□□□ -2,41
Trim28Q62318 Mir6957-201ENSMUST00000183708 64 ntBASIC-0,04□□□□□ -2,42
Trim28Q62318 Gm25137-201ENSMUST00000083251 110 ntBASIC-0,04□□□□□ -2,42
Trim28Q62318 Gm24296-201ENSMUST00000158297 106 ntBASIC-0,05□□□□□ -2,42
Trim28Q62318 Gm25032-201ENSMUST00000175411 84 ntBASIC-0,05□□□□□ -2,42
Trim28Q62318 Gm24194-201ENSMUST00000116805 90 ntBASIC-0,06□□□□□ -2,42
Trim28Q62318 Gm23811-201ENSMUST00000175155 84 ntBASIC-0,06□□□□□ -2,42
Trim28Q62318 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0,06□□□□□ -2,42
Trim28Q62318 Gm24587-201ENSMUST00000116697 89 ntBASIC-0,07□□□□□ -2,42
Trim28Q62318 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0,07□□□□□ -2,42
Trim28Q62318 Gm27735-201ENSMUST00000185085 76 ntBASIC-0,07□□□□□ -2,42
Trim28Q62318 Mir214-201ENSMUST00000083582 110 ntBASIC-0,07□□□□□ -2,42
Trim28Q62318 Gm26395-201ENSMUST00000104094 132 ntBASIC-0,08□□□□□ -2,42
Trim28Q62318 Gm23315-201ENSMUST00000158003 109 ntBASIC-0,08□□□□□ -2,42
Trim28Q62318 Gm25596-201ENSMUST00000178368 107 ntBASIC-0,08□□□□□ -2,42
Trim28Q62318 Gm24097-201ENSMUST00000178720 107 ntBASIC-0,08□□□□□ -2,42
Trim28Q62318 Gm44589-201ENSMUST00000207025 115 ntBASIC-0,09□□□□□ -2,42
Trim28Q62318 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0,09□□□□□ -2,42
Trim28Q62318 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0,1□□□□□ -2,43
Trim28Q62318 Gm22607-201ENSMUST00000158291 105 ntBASIC-0,1□□□□□ -2,43
Trim28Q62318 Gm20473-201ENSMUST00000173064 112 ntBASIC-0,1□□□□□ -2,43
Trim28Q62318 Gm22232-201ENSMUST00000104654 94 ntBASIC-0,11□□□□□ -2,43
Trim28Q62318 Mir1839-201ENSMUST00000175366 127 ntBASIC-0,11□□□□□ -2,43
Trim28Q62318 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-0,12□□□□□ -2,43
Trim28Q62318 Gm23918-201ENSMUST00000175253 106 ntBASIC-0,13□□□□□ -2,43
Trim28Q62318 Gm24646-201ENSMUST00000157109 99 ntBASIC-0,14□□□□□ -2,43
Trim28Q62318 Snora16a-202ENSMUST00000196061 137 ntBASIC-0,14□□□□□ -2,43
Trim28Q62318 Mir574-201ENSMUST00000103854 78 ntBASIC-0,15□□□□□ -2,43
Trim28Q62318 Gm25712-201ENSMUST00000158634 93 ntBASIC-0,16□□□□□ -2,44
Trim28Q62318 Gm19248-201ENSMUST00000209404 110 ntBASIC-0,16□□□□□ -2,44
Trim28Q62318 Mir96-201ENSMUST00000083652 106 ntBASIC-0,16□□□□□ -2,44
Trim28Q62318 Snord16a-201ENSMUST00000083895 99 ntBASIC-0,17□□□□□ -2,44
Trim28Q62318 Gm23904-201ENSMUST00000157567 124 ntBASIC-0,18□□□□□ -2,44
Trim28Q62318 Gm25225-201ENSMUST00000158197 102 ntBASIC-0,18□□□□□ -2,44
Trim28Q62318 Gm25248-201ENSMUST00000175473 98 ntBASIC-0,18□□□□□ -2,44
Trim28Q62318 Mir367-201ENSMUST00000083479 75 ntBASIC-0,18□□□□□ -2,44
Trim28Q62318 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0,18□□□□□ -2,44
Trim28Q62318 Gm25149-201ENSMUST00000157119 82 ntBASIC-0,19□□□□□ -2,44
Trim28Q62318 Gm44303-201ENSMUST00000196348 83 ntBASIC-0,19□□□□□ -2,44
Trim28Q62318 Snora16a-201ENSMUST00000083163 136 ntBASIC-0,19□□□□□ -2,44
Trim28Q62318 Gm26262-201ENSMUST00000158024 127 ntBASIC-0,2□□□□□ -2,44
Trim28Q62318 Gm24003-201ENSMUST00000158455 100 ntBASIC-0,2□□□□□ -2,44
Trim28Q62318 Gm24387-201ENSMUST00000104625 90 ntBASIC-0,21□□□□□ -2,44
Trim28Q62318 Gm24714-201ENSMUST00000102382 101 ntBASIC-0,22□□□□□ -2,44
Trim28Q62318 Gm24673-201ENSMUST00000116948 124 ntBASIC-0,22□□□□□ -2,44
Trim28Q62318 Gm23314-201ENSMUST00000157218 107 ntBASIC-0,22□□□□□ -2,44
Trim28Q62318 Gm23108-201ENSMUST00000178295 124 ntBASIC-0,22□□□□□ -2,44
Trim28Q62318 Mir378c-201ENSMUST00000184478 99 ntBASIC-0,22□□□□□ -2,44
Trim28Q62318 Gm27610-201ENSMUST00000184026 74 ntBASIC-0,23□□□□□ -2,45
Trim28Q62318 Mir677-202ENSMUST00000197076 78 ntBASIC-0,23□□□□□ -2,45
Trim28Q62318 Gm24047-201ENSMUST00000102405 104 ntBASIC-0,24□□□□□ -2,45
Trim28Q62318 Gm25429-201ENSMUST00000157607 132 ntBASIC-0,24□□□□□ -2,45
Trim28Q62318 Gm23308-201ENSMUST00000179475 107 ntBASIC-0,24□□□□□ -2,45
Trim28Q62318 Gm24887-201ENSMUST00000104386 108 ntBASIC-0,25□□□□□ -2,45
Trim28Q62318 Gm25338-201ENSMUST00000116849 120 ntBASIC-0,25□□□□□ -2,45
Trim28Q62318 Gm22925-201ENSMUST00000174956 102 ntBASIC-0,27□□□□□ -2,45
Trim28Q62318 Mir539-201ENSMUST00000102109 74 ntBASIC-0,28□□□□□ -2,45
Trim28Q62318 Gm23166-201ENSMUST00000157164 101 ntBASIC-0,28□□□□□ -2,45
Trim28Q62318 Gm22234-201ENSMUST00000174906 65 ntBASIC-0,28□□□□□ -2,45
Trim28Q62318 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0,28□□□□□ -2,45
Trim28Q62318 Gm24091-201ENSMUST00000082550 83 ntBASIC-0,28□□□□□ -2,45
Trim28Q62318 Mir145a-201ENSMUST00000083658 70 ntBASIC-0,28□□□□□ -2,45
Trim28Q62318 Gm23711-201ENSMUST00000083856 83 ntBASIC-0,28□□□□□ -2,45
Trim28Q62318 Gm25049-201ENSMUST00000158597 73 ntBASIC-0,29□□□□□ -2,46
Trim28Q62318 Mir192-201ENSMUST00000083589 89 ntBASIC-0,3□□□□□ -2,46
Trim28Q62318 Mir1969-201ENSMUST00000157623 94 ntBASIC-0,31□□□□□ -2,46
Trim28Q62318 Gm22013-201ENSMUST00000158788 103 ntBASIC-0,31□□□□□ -2,46
Trim28Q62318 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0,31□□□□□ -2,46
Trim28Q62318 Gm24502-201ENSMUST00000158453 105 ntBASIC-0,32□□□□□ -2,46
Trim28Q62318 Gm26472-201ENSMUST00000116760 83 ntBASIC-0,33□□□□□ -2,46
Trim28Q62318 Gm24051-201ENSMUST00000158622 75 ntBASIC-0,33□□□□□ -2,46
Trim28Q62318 Gm24823-201ENSMUST00000175092 91 ntBASIC-0,34□□□□□ -2,46
Retrieved 100 of 76,532 protein–RNA pairs in 117,7 ms