Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm22197-201ENSMUST00000116866 58 ntBASIC0,48□□□□□ -2,33
Col17a1Q07563 Gm28001-201ENSMUST00000183561 117 ntBASIC0,46□□□□□ -2,34
Col17a1Q07563 Gm42773-201ENSMUST00000196962 148 ntBASIC0,46□□□□□ -2,34
Col17a1Q07563 Gm23315-201ENSMUST00000158003 109 ntBASIC0,45□□□□□ -2,34
Col17a1Q07563 Mir7651-201ENSMUST00000184154 64 ntBASIC0,44□□□□□ -2,34
Col17a1Q07563 Mir28c-201ENSMUST00000200096 75 ntBASIC0,44□□□□□ -2,34
Col17a1Q07563 Gm22602-201ENSMUST00000157596 95 ntBASIC0,43□□□□□ -2,34
Col17a1Q07563 Mir3967-201ENSMUST00000198710 68 ntBASIC0,43□□□□□ -2,34
Col17a1Q07563 Gm44328-201ENSMUST00000199331 75 ntBASIC0,43□□□□□ -2,34
Col17a1Q07563 Mir18b-201ENSMUST00000103923 83 ntBASIC0,42□□□□□ -2,34
Col17a1Q07563 Gm24387-201ENSMUST00000104625 90 ntBASIC0,42□□□□□ -2,34
Col17a1Q07563 Snord42b-201ENSMUST00000083742 69 ntBASIC0,41□□□□□ -2,34
Col17a1Q07563 Gm26152-201ENSMUST00000157427 101 ntBASIC0,41□□□□□ -2,34
Col17a1Q07563 Gm23811-201ENSMUST00000175155 84 ntBASIC0,4□□□□□ -2,35
Col17a1Q07563 Gm22305-201ENSMUST00000082690 108 ntBASIC0,4□□□□□ -2,35
Col17a1Q07563 Scarna8-201ENSMUST00000158333 131 ntBASIC0,39□□□□□ -2,35
Col17a1Q07563 Gm23821-201ENSMUST00000158738 106 ntBASIC0,37□□□□□ -2,35
Col17a1Q07563 Gm27475-201ENSMUST00000183420 61 ntBASIC0,37□□□□□ -2,35
Col17a1Q07563 Gm24646-201ENSMUST00000157109 99 ntBASIC0,36□□□□□ -2,35
Col17a1Q07563 Gm24091-201ENSMUST00000082550 83 ntBASIC0,36□□□□□ -2,35
Col17a1Q07563 Gm23711-201ENSMUST00000083856 83 ntBASIC0,36□□□□□ -2,35
Col17a1Q07563 Gm22942-201ENSMUST00000158563 124 ntBASIC0,35□□□□□ -2,35
Col17a1Q07563 Mir8107-201ENSMUST00000184024 117 ntBASIC0,35□□□□□ -2,35
Col17a1Q07563 Mir7681-201ENSMUST00000184834 72 ntBASIC0,34□□□□□ -2,36
Col17a1Q07563 Gm44375-201ENSMUST00000196657 150 ntBASIC0,32□□□□□ -2,36
Col17a1Q07563 AC167019.1-201ENSMUST00000227913 106 ntBASIC0,31□□□□□ -2,36
Col17a1Q07563 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0,3□□□□□ -2,36
Col17a1Q07563 Gm24833-201ENSMUST00000116775 120 ntBASIC0,29□□□□□ -2,36
Col17a1Q07563 Gm24502-201ENSMUST00000158453 105 ntBASIC0,29□□□□□ -2,36
Col17a1Q07563 Mir6365-201ENSMUST00000183990 101 ntBASIC0,29□□□□□ -2,36
Col17a1Q07563 Mir136-201ENSMUST00000199494 62 ntBASIC0,28□□□□□ -2,37
Col17a1Q07563 Mir367-201ENSMUST00000083479 75 ntBASIC0,28□□□□□ -2,37
Col17a1Q07563 Gm24256-201ENSMUST00000083696 84 ntBASIC0,28□□□□□ -2,37
Col17a1Q07563 Mir1839-201ENSMUST00000175366 127 ntBASIC0,27□□□□□ -2,37
Col17a1Q07563 Gm24336-201ENSMUST00000104203 146 ntBASIC0,26□□□□□ -2,37
Col17a1Q07563 Gm25137-201ENSMUST00000083251 110 ntBASIC0,26□□□□□ -2,37
Col17a1Q07563 Gm25249-201ENSMUST00000175471 78 ntBASIC0,25□□□□□ -2,37
Col17a1Q07563 Gm26472-201ENSMUST00000116760 83 ntBASIC0,24□□□□□ -2,37
Col17a1Q07563 Gm24673-201ENSMUST00000116948 124 ntBASIC0,24□□□□□ -2,37
Col17a1Q07563 Gm23108-201ENSMUST00000178295 124 ntBASIC0,24□□□□□ -2,37
Col17a1Q07563 Gm22327-201ENSMUST00000158899 108 ntBASIC0,23□□□□□ -2,37
Col17a1Q07563 Mir6957-201ENSMUST00000183708 64 ntBASIC0,23□□□□□ -2,37
Col17a1Q07563 Gm25143-201ENSMUST00000082696 109 ntBASIC0,23□□□□□ -2,37
Col17a1Q07563 Snord85-201ENSMUST00000083262 73 ntBASIC0,23□□□□□ -2,37
Col17a1Q07563 Mir382-201ENSMUST00000083494 76 ntBASIC0,23□□□□□ -2,37
Col17a1Q07563 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0,22□□□□□ -2,37
Col17a1Q07563 Gm44589-201ENSMUST00000207025 115 ntBASIC0,22□□□□□ -2,37
Col17a1Q07563 Snora16a-202ENSMUST00000196061 137 ntBASIC0,21□□□□□ -2,38
Col17a1Q07563 Gm24587-201ENSMUST00000116697 89 ntBASIC0,2□□□□□ -2,38
Col17a1Q07563 Gm25472-201ENSMUST00000175454 78 ntBASIC0,2□□□□□ -2,38
Col17a1Q07563 Gm45374-201ENSMUST00000211388 136 ntBASIC0,2□□□□□ -2,38
Col17a1Q07563 Gm24455-201ENSMUST00000083348 131 ntBASIC0,2□□□□□ -2,38
Col17a1Q07563 Gm25952-201ENSMUST00000175329 74 ntBASIC0,19□□□□□ -2,38
Col17a1Q07563 AL845349.1-201ENSMUST00000213794 78 ntBASIC0,18□□□□□ -2,38
Col17a1Q07563 AC122210.2-201ENSMUST00000220216 115 ntBASIC0,18□□□□□ -2,38
Col17a1Q07563 Gm26210-201ENSMUST00000158680 91 ntBASIC0,17□□□□□ -2,38
Col17a1Q07563 Mir1969-201ENSMUST00000157623 94 ntBASIC0,16□□□□□ -2,38
Col17a1Q07563 Gm24003-201ENSMUST00000158455 100 ntBASIC0,15□□□□□ -2,39
Col17a1Q07563 Gm23690-201ENSMUST00000083036 94 ntBASIC0,15□□□□□ -2,39
Col17a1Q07563 Mir214-201ENSMUST00000083582 110 ntBASIC0,15□□□□□ -2,39
Col17a1Q07563 Mir29b-1-201ENSMUST00000083670 71 ntBASIC0,15□□□□□ -2,39
Col17a1Q07563 Snord16a-201ENSMUST00000083895 99 ntBASIC0,15□□□□□ -2,39
Col17a1Q07563 Gm22324-201ENSMUST00000158903 114 ntBASIC0,14□□□□□ -2,39
Col17a1Q07563 Gm22368-201ENSMUST00000102416 109 ntBASIC0,13□□□□□ -2,39
Col17a1Q07563 Gm23543-201ENSMUST00000158207 106 ntBASIC0,13□□□□□ -2,39
Col17a1Q07563 n-R5s171-201ENSMUST00000104128 79 ntBASIC0,12□□□□□ -2,39
Col17a1Q07563 Gm26262-201ENSMUST00000158024 127 ntBASIC0,11□□□□□ -2,39
Col17a1Q07563 Mir192-201ENSMUST00000083589 89 ntBASIC0,11□□□□□ -2,39
Col17a1Q07563 Gm25225-201ENSMUST00000158197 102 ntBASIC0,1□□□□□ -2,39
Col17a1Q07563 Gm25712-201ENSMUST00000158634 93 ntBASIC0,1□□□□□ -2,39
Col17a1Q07563 Gm23556-201ENSMUST00000157821 92 ntBASIC0,1□□□□□ -2,39
Col17a1Q07563 Mir7094-2-201ENSMUST00000184622 60 ntBASIC0,1□□□□□ -2,39
Col17a1Q07563 Mir7094-1-201ENSMUST00000199671 60 ntBASIC0,1□□□□□ -2,39
Col17a1Q07563 Mir672-201ENSMUST00000102331 100 ntBASIC0,08□□□□□ -2,4
Col17a1Q07563 Mir7038-201ENSMUST00000184833 71 ntBASIC0,08□□□□□ -2,4
Col17a1Q07563 Mir664-201ENSMUST00000196796 69 ntBASIC0,08□□□□□ -2,4
Col17a1Q07563 Mir539-201ENSMUST00000102109 74 ntBASIC0,07□□□□□ -2,4
Col17a1Q07563 Gm23335-201ENSMUST00000117021 90 ntBASIC0,06□□□□□ -2,4
Col17a1Q07563 Gm25429-201ENSMUST00000157607 132 ntBASIC0,06□□□□□ -2,4
Col17a1Q07563 Gm25032-201ENSMUST00000175411 84 ntBASIC0,06□□□□□ -2,4
Col17a1Q07563 Gm22813-201ENSMUST00000199948 123 ntBASIC0,06□□□□□ -2,4
Col17a1Q07563 Gm19248-201ENSMUST00000209404 110 ntBASIC0,06□□□□□ -2,4
Col17a1Q07563 Gm23904-201ENSMUST00000157567 124 ntBASIC0,05□□□□□ -2,4
Col17a1Q07563 Gm22077-201ENSMUST00000157594 93 ntBASIC0,05□□□□□ -2,4
Col17a1Q07563 Gm25703-201ENSMUST00000083123 151 ntBASIC0,04□□□□□ -2,4
Col17a1Q07563 Gm22234-201ENSMUST00000174906 65 ntBASIC0,03□□□□□ -2,4
Col17a1Q07563 Mir96-201ENSMUST00000083652 106 ntBASIC0,03□□□□□ -2,4
Col17a1Q07563 Gm22313-201ENSMUST00000158008 129 ntBASIC0,03□□□□□ -2,41
Col17a1Q07563 Gm22607-201ENSMUST00000158291 105 ntBASIC0,01□□□□□ -2,41
Col17a1Q07563 Gm22013-201ENSMUST00000158788 103 ntBASIC0□□□□□ -2,41
Col17a1Q07563 Mir3470a-201ENSMUST00000175223 77 ntBASIC0□□□□□ -2,41
Col17a1Q07563 Mir1912-201ENSMUST00000175298 87 ntBASIC0□□□□□ -2,41
Col17a1Q07563 Gm24775-201ENSMUST00000157377 99 ntBASIC-0,01□□□□□ -2,41
Col17a1Q07563 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0,01□□□□□ -2,41
Col17a1Q07563 Mir145a-201ENSMUST00000083658 70 ntBASIC-0,02□□□□□ -2,41
Col17a1Q07563 Gm22783-201ENSMUST00000104089 107 ntBASIC-0,03□□□□□ -2,41
Col17a1Q07563 Gm26395-201ENSMUST00000104094 132 ntBASIC-0,03□□□□□ -2,41
Col17a1Q07563 Gm25493-201ENSMUST00000157375 103 ntBASIC-0,03□□□□□ -2,41
Col17a1Q07563 Mir677-202ENSMUST00000197076 78 ntBASIC-0,03□□□□□ -2,41
Col17a1Q07563 Gm27610-201ENSMUST00000184026 74 ntBASIC-0,04□□□□□ -2,42
Retrieved 100 of 76,532 protein–RNA pairs in 121,5 ms