Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.04□□□□□ -2.42
Sox1P53783 Gm22127-201ENSMUST00000083239 106 ntBASIC-0.05□□□□□ -2.42
Sox1P53783 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.06□□□□□ -2.42
Sox1P53783 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.06□□□□□ -2.42
Sox1P53783 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.07□□□□□ -2.42
Sox1P53783 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.07□□□□□ -2.42
Sox1P53783 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.07□□□□□ -2.42
Sox1P53783 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.08□□□□□ -2.42
Sox1P53783 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.08□□□□□ -2.42
Sox1P53783 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.08□□□□□ -2.42
Sox1P53783 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.08□□□□□ -2.42
Sox1P53783 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.09□□□□□ -2.42
Sox1P53783 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.09□□□□□ -2.42
Sox1P53783 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.1□□□□□ -2.43
Sox1P53783 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.1□□□□□ -2.43
Sox1P53783 Mir1955-201ENSMUST00000158014 98 ntBASIC-0.11□□□□□ -2.43
Sox1P53783 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.11□□□□□ -2.43
Sox1P53783 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.12□□□□□ -2.43
Sox1P53783 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.12□□□□□ -2.43
Sox1P53783 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.12□□□□□ -2.43
Sox1P53783 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.12□□□□□ -2.43
Sox1P53783 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.13□□□□□ -2.43
Sox1P53783 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.13□□□□□ -2.43
Sox1P53783 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.13□□□□□ -2.43
Sox1P53783 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.13□□□□□ -2.43
Sox1P53783 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.13□□□□□ -2.43
Sox1P53783 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.14□□□□□ -2.43
Sox1P53783 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.14□□□□□ -2.43
Sox1P53783 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.15□□□□□ -2.43
Sox1P53783 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.15□□□□□ -2.43
Sox1P53783 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.15□□□□□ -2.43
Sox1P53783 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.16□□□□□ -2.44
Sox1P53783 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.16□□□□□ -2.44
Sox1P53783 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.17□□□□□ -2.44
Sox1P53783 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.18□□□□□ -2.44
Sox1P53783 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.18□□□□□ -2.44
Sox1P53783 Mir136-201ENSMUST00000199494 62 ntBASIC-0.18□□□□□ -2.44
Sox1P53783 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.18□□□□□ -2.44
Sox1P53783 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.19□□□□□ -2.44
Sox1P53783 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.19□□□□□ -2.44
Sox1P53783 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.19□□□□□ -2.44
Sox1P53783 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.19□□□□□ -2.44
Sox1P53783 Snord8-201ENSMUST00000175303 110 ntBASIC-0.2□□□□□ -2.44
Sox1P53783 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.2□□□□□ -2.44
Sox1P53783 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.2□□□□□ -2.44
Sox1P53783 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.21□□□□□ -2.44
Sox1P53783 Mir183-201ENSMUST00000083685 70 ntBASIC-0.23□□□□□ -2.45
Sox1P53783 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.24□□□□□ -2.45
Sox1P53783 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.24□□□□□ -2.45
Sox1P53783 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.24□□□□□ -2.45
Sox1P53783 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.24□□□□□ -2.45
Sox1P53783 Mir295-201ENSMUST00000104694 69 ntBASIC-0.25□□□□□ -2.45
Sox1P53783 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.27□□□□□ -2.45
Sox1P53783 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.27□□□□□ -2.45
Sox1P53783 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.27□□□□□ -2.45
Sox1P53783 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.28□□□□□ -2.45
Sox1P53783 Gm24651-201ENSMUST00000157107 107 ntBASIC-0.28□□□□□ -2.45
Sox1P53783 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.28□□□□□ -2.45
Sox1P53783 Gm26306-201ENSMUST00000157773 119 ntBASIC-0.28□□□□□ -2.45
Sox1P53783 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-0.28□□□□□ -2.45
Sox1P53783 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.28□□□□□ -2.45
Sox1P53783 Mir96-201ENSMUST00000083652 106 ntBASIC-0.28□□□□□ -2.45
Sox1P53783 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.29□□□□□ -2.46
Sox1P53783 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.29□□□□□ -2.46
Sox1P53783 Gm22260-201ENSMUST00000178643 107 ntBASIC-0.29□□□□□ -2.46
Sox1P53783 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.29□□□□□ -2.46
Sox1P53783 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.29□□□□□ -2.46
Sox1P53783 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.29□□□□□ -2.46
Sox1P53783 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.3□□□□□ -2.46
Sox1P53783 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.3□□□□□ -2.46
Sox1P53783 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.3□□□□□ -2.46
Sox1P53783 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.31□□□□□ -2.46
Sox1P53783 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.31□□□□□ -2.46
Sox1P53783 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.32□□□□□ -2.46
Sox1P53783 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.32□□□□□ -2.46
Sox1P53783 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.33□□□□□ -2.46
Sox1P53783 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.33□□□□□ -2.46
Sox1P53783 Gm22301-201ENSMUST00000082656 107 ntBASIC-0.33□□□□□ -2.46
Sox1P53783 Gm22056-201ENSMUST00000083386 81 ntBASIC-0.33□□□□□ -2.46
Sox1P53783 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.34□□□□□ -2.46
Sox1P53783 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.34□□□□□ -2.46
Sox1P53783 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
Sox1P53783 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
Sox1P53783 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.34□□□□□ -2.46
Sox1P53783 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
Sox1P53783 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.35□□□□□ -2.47
Sox1P53783 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.35□□□□□ -2.47
Sox1P53783 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.35□□□□□ -2.47
Sox1P53783 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.36□□□□□ -2.47
Sox1P53783 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Sox1P53783 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.38□□□□□ -2.47
Sox1P53783 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.39□□□□□ -2.47
Sox1P53783 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.39□□□□□ -2.47
Sox1P53783 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.39□□□□□ -2.47
Sox1P53783 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.4□□□□□ -2.47
Sox1P53783 Gm24531-201ENSMUST00000157945 100 ntBASIC-0.4□□□□□ -2.47
Sox1P53783 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.4□□□□□ -2.47
Sox1P53783 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.4□□□□□ -2.47
Sox1P53783 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.4□□□□□ -2.47
Sox1P53783 Mir677-202ENSMUST00000197076 78 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms