Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm23349-201ENSMUST00000158432 98 ntBASIC-1.89□□□□□ -2.71
Col1a1P11087 Mir1912-201ENSMUST00000175298 87 ntBASIC-1.89□□□□□ -2.71
Col1a1P11087 Gm44470-201ENSMUST00000203913 142 ntBASIC-1.9□□□□□ -2.71
Col1a1P11087 Mir466h-201ENSMUST00000104748 81 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 Gm22491-201ENSMUST00000157190 102 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 Gm22951-201ENSMUST00000179471 107 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 mt-Tr-201ENSMUST00000082412 68 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 Gm24457-201ENSMUST00000083196 105 ntBASIC-1.91□□□□□ -2.72
Col1a1P11087 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.92□□□□□ -2.72
Col1a1P11087 Gm23922-201ENSMUST00000178792 79 ntBASIC-1.93□□□□□ -2.72
Col1a1P11087 Gm24657-201ENSMUST00000180085 79 ntBASIC-1.93□□□□□ -2.72
Col1a1P11087 Gm22996-201ENSMUST00000180236 79 ntBASIC-1.93□□□□□ -2.72
Col1a1P11087 Gm25867-201ENSMUST00000158254 103 ntBASIC-1.94□□□□□ -2.72
Col1a1P11087 Gm26401-201ENSMUST00000158502 76 ntBASIC-1.94□□□□□ -2.72
Col1a1P11087 Mir669p-2-201ENSMUST00000103868 87 ntBASIC-1.94□□□□□ -2.72
Col1a1P11087 Mir669p-1-201ENSMUST00000103884 87 ntBASIC-1.94□□□□□ -2.72
Col1a1P11087 Gm26008-201ENSMUST00000158797 99 ntBASIC-1.94□□□□□ -2.72
Col1a1P11087 Gm25678-201ENSMUST00000174984 73 ntBASIC-1.95□□□□□ -2.72
Col1a1P11087 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.95□□□□□ -2.72
Col1a1P11087 Gm23044-201ENSMUST00000157891 100 ntBASIC-1.96□□□□□ -2.72
Col1a1P11087 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.96□□□□□ -2.72
Col1a1P11087 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.96□□□□□ -2.72
Col1a1P11087 Mir466-201ENSMUST00000093591 73 ntBASIC-1.96□□□□□ -2.72
Col1a1P11087 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.97□□□□□ -2.72
Col1a1P11087 Gm26225-201ENSMUST00000082508 135 ntBASIC-1.97□□□□□ -2.72
Col1a1P11087 Snord47-201ENSMUST00000083034 77 ntBASIC-1.97□□□□□ -2.72
Col1a1P11087 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.98□□□□□ -2.73
Col1a1P11087 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.99□□□□□ -2.73
Col1a1P11087 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.99□□□□□ -2.73
Col1a1P11087 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.99□□□□□ -2.73
Col1a1P11087 Gm14837-201ENSMUST00000119688 206 ntBASIC-2□□□□□ -2.73
Col1a1P11087 Gm23210-201ENSMUST00000158668 98 ntBASIC-2□□□□□ -2.73
Col1a1P11087 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.01□□□□□ -2.73
Col1a1P11087 Mir1898-201ENSMUST00000122643 83 ntBASIC-2.01□□□□□ -2.73
Col1a1P11087 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.02□□□□□ -2.73
Col1a1P11087 Gm25222-201ENSMUST00000158199 126 ntBASIC-2.02□□□□□ -2.73
Col1a1P11087 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.02□□□□□ -2.73
Col1a1P11087 Gm22255-201ENSMUST00000177933 79 ntBASIC-2.02□□□□□ -2.73
Col1a1P11087 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.02□□□□□ -2.73
Col1a1P11087 Gm25007-201ENSMUST00000083808 133 ntBASIC-2.02□□□□□ -2.73
Col1a1P11087 Gm23254-201ENSMUST00000097244 79 ntBASIC-2.02□□□□□ -2.73
Col1a1P11087 Gm25920-201ENSMUST00000158307 99 ntBASIC-2.03□□□□□ -2.73
Col1a1P11087 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.03□□□□□ -2.73
Col1a1P11087 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-2.04□□□□□ -2.74
Col1a1P11087 Gm24750-201ENSMUST00000157843 104 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir1955-201ENSMUST00000158014 98 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-2.04□□□□□ -2.74
Col1a1P11087 Mir3083-201ENSMUST00000175377 64 ntBASIC-2.05□□□□□ -2.74
Col1a1P11087 Gm23977-201ENSMUST00000177871 74 ntBASIC-2.05□□□□□ -2.74
Col1a1P11087 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.06□□□□□ -2.74
Col1a1P11087 Gm24495-201ENSMUST00000178575 79 ntBASIC-2.06□□□□□ -2.74
Col1a1P11087 Gm22253-201ENSMUST00000179870 79 ntBASIC-2.06□□□□□ -2.74
Col1a1P11087 Gm37746-201ENSMUST00000193249 198 ntBASIC-2.06□□□□□ -2.74
Col1a1P11087 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-2.07□□□□□ -2.74
Col1a1P11087 Gm22095-201ENSMUST00000158984 150 ntBASIC-2.07□□□□□ -2.74
Col1a1P11087 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-2.07□□□□□ -2.74
Col1a1P11087 Snord70-201ENSMUST00000104157 87 ntBASIC-2.07□□□□□ -2.74
Col1a1P11087 Gm25071-201ENSMUST00000175232 70 ntBASIC-2.07□□□□□ -2.74
Col1a1P11087 Gm23649-201ENSMUST00000179007 107 ntBASIC-2.07□□□□□ -2.74
Col1a1P11087 Gm27671-201ENSMUST00000183739 66 ntBASIC-2.07□□□□□ -2.74
Col1a1P11087 Gm25753-201ENSMUST00000116792 121 ntBASIC-2.08□□□□□ -2.74
Col1a1P11087 Gm44859-201ENSMUST00000207831 94 ntBASIC-2.08□□□□□ -2.74
Col1a1P11087 Gm26306-201ENSMUST00000157773 119 ntBASIC-2.09□□□□□ -2.74
Col1a1P11087 Gm27332-201ENSMUST00000184893 112 ntBASIC-2.09□□□□□ -2.74
Col1a1P11087 Gm22729-201ENSMUST00000158088 129 ntBASIC-2.1□□□□□ -2.75
Col1a1P11087 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.1□□□□□ -2.75
Col1a1P11087 Gm25397-201ENSMUST00000176951 92 ntBASIC-2.11□□□□□ -2.75
Col1a1P11087 Gm23864-201ENSMUST00000177607 107 ntBASIC-2.11□□□□□ -2.75
Col1a1P11087 Gm24926-201ENSMUST00000178053 79 ntBASIC-2.11□□□□□ -2.75
Col1a1P11087 Gm22632-201ENSMUST00000178266 79 ntBASIC-2.11□□□□□ -2.75
Col1a1P11087 Gm37845-201ENSMUST00000194977 355 ntBASIC-2.13□□□□□ -2.75
Col1a1P11087 Gm22039-201ENSMUST00000157278 132 ntBASIC-2.14□□□□□ -2.75
Col1a1P11087 Gm26485-201ENSMUST00000158019 64 ntBASIC-2.16□□□□□ -2.76
Col1a1P11087 AC160962.3-201ENSMUST00000225914 112 ntBASIC-2.16□□□□□ -2.76
Col1a1P11087 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.17□□□□□ -2.76
Col1a1P11087 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.18□□□□□ -2.76
Col1a1P11087 Gm24410-201ENSMUST00000083433 107 ntBASIC-2.18□□□□□ -2.76
Col1a1P11087 Gm23785-201ENSMUST00000116741 96 ntBASIC-2.19□□□□□ -2.76
Col1a1P11087 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.19□□□□□ -2.76
Col1a1P11087 Gm24710-201ENSMUST00000175235 101 ntBASIC-2.2□□□□□ -2.76
Col1a1P11087 Gm24135-201ENSMUST00000179085 101 ntBASIC-2.2□□□□□ -2.76
Col1a1P11087 Gm22474-201ENSMUST00000179407 107 ntBASIC-2.2□□□□□ -2.76
Col1a1P11087 Gm23244-201ENSMUST00000083375 92 ntBASIC-2.2□□□□□ -2.76
Col1a1P11087 Mir1950-201ENSMUST00000158526 74 ntBASIC-2.23□□□□□ -2.77
Col1a1P11087 Gm26412-201ENSMUST00000157666 55 ntBASIC-2.24□□□□□ -2.77
Col1a1P11087 Gm22621-201ENSMUST00000179678 74 ntBASIC-2.24□□□□□ -2.77
Col1a1P11087 Gm10813-201ENSMUST00000099936 90 ntBASIC-2.24□□□□□ -2.77
Col1a1P11087 Gm25254-201ENSMUST00000157239 104 ntBASIC-2.25□□□□□ -2.77
Col1a1P11087 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 76,532 protein–RNA pairs in 210 ms