Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.25□□□□□ -2.61
Cldn3Q9Z0G9 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.25□□□□□ -2.61
Cldn3Q9Z0G9 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.25□□□□□ -2.61
Cldn3Q9Z0G9 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.25□□□□□ -2.61
Cldn3Q9Z0G9 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.25□□□□□ -2.61
Cldn3Q9Z0G9 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.25□□□□□ -2.61
Cldn3Q9Z0G9 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.25□□□□□ -2.61
Cldn3Q9Z0G9 Mir702-201ENSMUST00000102285 109 ntBASIC-1.26□□□□□ -2.61
Cldn3Q9Z0G9 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.26□□□□□ -2.61
Cldn3Q9Z0G9 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.26□□□□□ -2.61
Cldn3Q9Z0G9 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.27□□□□□ -2.61
Cldn3Q9Z0G9 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.28□□□□□ -2.61
Cldn3Q9Z0G9 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.28□□□□□ -2.61
Cldn3Q9Z0G9 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.28□□□□□ -2.61
Cldn3Q9Z0G9 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.28□□□□□ -2.61
Cldn3Q9Z0G9 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.28□□□□□ -2.61
Cldn3Q9Z0G9 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.3□□□□□ -2.62
Cldn3Q9Z0G9 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.3□□□□□ -2.62
Cldn3Q9Z0G9 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.3□□□□□ -2.62
Cldn3Q9Z0G9 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.3□□□□□ -2.62
Cldn3Q9Z0G9 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.31□□□□□ -2.62
Cldn3Q9Z0G9 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.31□□□□□ -2.62
Cldn3Q9Z0G9 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.31□□□□□ -2.62
Cldn3Q9Z0G9 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.31□□□□□ -2.62
Cldn3Q9Z0G9 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.32□□□□□ -2.62
Cldn3Q9Z0G9 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.33□□□□□ -2.62
Cldn3Q9Z0G9 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.33□□□□□ -2.62
Cldn3Q9Z0G9 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.34□□□□□ -2.62
Cldn3Q9Z0G9 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.34□□□□□ -2.62
Cldn3Q9Z0G9 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.35□□□□□ -2.63
Cldn3Q9Z0G9 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.35□□□□□ -2.63
Cldn3Q9Z0G9 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.35□□□□□ -2.63
Cldn3Q9Z0G9 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.35□□□□□ -2.63
Cldn3Q9Z0G9 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.35□□□□□ -2.63
Cldn3Q9Z0G9 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.35□□□□□ -2.63
Cldn3Q9Z0G9 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.36□□□□□ -2.63
Cldn3Q9Z0G9 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.36□□□□□ -2.63
Cldn3Q9Z0G9 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.36□□□□□ -2.63
Cldn3Q9Z0G9 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.37□□□□□ -2.63
Cldn3Q9Z0G9 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.37□□□□□ -2.63
Cldn3Q9Z0G9 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.37□□□□□ -2.63
Cldn3Q9Z0G9 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.37□□□□□ -2.63
Cldn3Q9Z0G9 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.37□□□□□ -2.63
Cldn3Q9Z0G9 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.38□□□□□ -2.63
Cldn3Q9Z0G9 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.38□□□□□ -2.63
Cldn3Q9Z0G9 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
Cldn3Q9Z0G9 Mir876-201ENSMUST00000104659 81 ntBASIC-1.4□□□□□ -2.63
Cldn3Q9Z0G9 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
Cldn3Q9Z0G9 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.4□□□□□ -2.63
Cldn3Q9Z0G9 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.4□□□□□ -2.63
Cldn3Q9Z0G9 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.41□□□□□ -2.64
Cldn3Q9Z0G9 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.41□□□□□ -2.64
Cldn3Q9Z0G9 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.41□□□□□ -2.64
Cldn3Q9Z0G9 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.42□□□□□ -2.64
Cldn3Q9Z0G9 Snord57-201ENSMUST00000083338 72 ntBASIC-1.42□□□□□ -2.64
Cldn3Q9Z0G9 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.43□□□□□ -2.64
Cldn3Q9Z0G9 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.43□□□□□ -2.64
Cldn3Q9Z0G9 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
Cldn3Q9Z0G9 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.44□□□□□ -2.64
Cldn3Q9Z0G9 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.45□□□□□ -2.64
Cldn3Q9Z0G9 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.45□□□□□ -2.64
Cldn3Q9Z0G9 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.45□□□□□ -2.64
Cldn3Q9Z0G9 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.45□□□□□ -2.64
Cldn3Q9Z0G9 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.46□□□□□ -2.64
Cldn3Q9Z0G9 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.48□□□□□ -2.65
Cldn3Q9Z0G9 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.49□□□□□ -2.65
Cldn3Q9Z0G9 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.49□□□□□ -2.65
Cldn3Q9Z0G9 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.49□□□□□ -2.65
Cldn3Q9Z0G9 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.5□□□□□ -2.65
Cldn3Q9Z0G9 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.5□□□□□ -2.65
Cldn3Q9Z0G9 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.5□□□□□ -2.65
Cldn3Q9Z0G9 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.51□□□□□ -2.65
Cldn3Q9Z0G9 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.51□□□□□ -2.65
Cldn3Q9Z0G9 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.51□□□□□ -2.65
Cldn3Q9Z0G9 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.51□□□□□ -2.65
Cldn3Q9Z0G9 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.52□□□□□ -2.65
Cldn3Q9Z0G9 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.52□□□□□ -2.65
Cldn3Q9Z0G9 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.53□□□□□ -2.65
Cldn3Q9Z0G9 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
Cldn3Q9Z0G9 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.54□□□□□ -2.66
Cldn3Q9Z0G9 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.54□□□□□ -2.66
Cldn3Q9Z0G9 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.56□□□□□ -2.66
Cldn3Q9Z0G9 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.57□□□□□ -2.66
Cldn3Q9Z0G9 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.57□□□□□ -2.66
Cldn3Q9Z0G9 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.57□□□□□ -2.66
Cldn3Q9Z0G9 Gm24586-201ENSMUST00000116695 89 ntBASIC-1.58□□□□□ -2.66
Cldn3Q9Z0G9 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.58□□□□□ -2.66
Cldn3Q9Z0G9 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.59□□□□□ -2.66
Cldn3Q9Z0G9 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.59□□□□□ -2.66
Cldn3Q9Z0G9 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.59□□□□□ -2.66
Cldn3Q9Z0G9 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.6□□□□□ -2.67
Cldn3Q9Z0G9 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.6□□□□□ -2.67
Cldn3Q9Z0G9 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.6□□□□□ -2.67
Cldn3Q9Z0G9 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.61□□□□□ -2.67
Cldn3Q9Z0G9 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
Cldn3Q9Z0G9 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
Cldn3Q9Z0G9 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.64□□□□□ -2.67
Cldn3Q9Z0G9 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.64□□□□□ -2.67
Cldn3Q9Z0G9 Gm44385-201ENSMUST00000198781 81 ntBASIC-1.64□□□□□ -2.67
Cldn3Q9Z0G9 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 166.8 ms