Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0,62□□□□□ -2,51
Scn5aQ9JJV9 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0,62□□□□□ -2,51
Scn5aQ9JJV9 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0,62□□□□□ -2,51
Scn5aQ9JJV9 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0,62□□□□□ -2,51
Scn5aQ9JJV9 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0,62□□□□□ -2,51
Scn5aQ9JJV9 Mir1948-201ENSMUST00000157325 85 ntBASIC-0,63□□□□□ -2,51
Scn5aQ9JJV9 Mir677-202ENSMUST00000197076 78 ntBASIC-0,64□□□□□ -2,51
Scn5aQ9JJV9 Gm44932-201ENSMUST00000206799 121 ntBASIC-0,64□□□□□ -2,51
Scn5aQ9JJV9 Gm27987-201ENSMUST00000184023 93 ntBASIC-0,64□□□□□ -2,51
Scn5aQ9JJV9 Gm24336-201ENSMUST00000104203 146 ntBASIC-0,65□□□□□ -2,51
Scn5aQ9JJV9 Gm25644-201ENSMUST00000083209 107 ntBASIC-0,65□□□□□ -2,51
Scn5aQ9JJV9 Gm25225-201ENSMUST00000158197 102 ntBASIC-0,65□□□□□ -2,51
Scn5aQ9JJV9 Gm6293-201ENSMUST00000050339 195 ntBASIC-0,65□□□□□ -2,51
Scn5aQ9JJV9 Gm29344-201ENSMUST00000068143 210 ntBASIC-0,65□□□□□ -2,51
Scn5aQ9JJV9 Gm25061-201ENSMUST00000104665 107 ntBASIC-0,66□□□□□ -2,52
Scn5aQ9JJV9 Mir136-201ENSMUST00000199494 62 ntBASIC-0,66□□□□□ -2,52
Scn5aQ9JJV9 Mir6964-201ENSMUST00000200252 59 ntBASIC-0,66□□□□□ -2,52
Scn5aQ9JJV9 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0,66□□□□□ -2,52
Scn5aQ9JJV9 Gm22805-201ENSMUST00000082739 107 ntBASIC-0,66□□□□□ -2,52
Scn5aQ9JJV9 Gm23173-201ENSMUST00000157161 160 ntBASIC-0,67□□□□□ -2,52
Scn5aQ9JJV9 Gm23477-201ENSMUST00000158882 128 ntBASIC-0,67□□□□□ -2,52
Scn5aQ9JJV9 Gm24162-201ENSMUST00000093665 102 ntBASIC-0,69□□□□□ -2,52
Scn5aQ9JJV9 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0,69□□□□□ -2,52
Scn5aQ9JJV9 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0,69□□□□□ -2,52
Scn5aQ9JJV9 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0,7□□□□□ -2,52
Scn5aQ9JJV9 Gm22165-201ENSMUST00000158414 103 ntBASIC-0,7□□□□□ -2,52
Scn5aQ9JJV9 Gm19248-201ENSMUST00000209404 110 ntBASIC-0,7□□□□□ -2,52
Scn5aQ9JJV9 Gm24701-201ENSMUST00000101946 105 ntBASIC-0,71□□□□□ -2,52
Scn5aQ9JJV9 Gm25879-201ENSMUST00000104330 107 ntBASIC-0,71□□□□□ -2,52
Scn5aQ9JJV9 Snord8-201ENSMUST00000175303 110 ntBASIC-0,71□□□□□ -2,52
Scn5aQ9JJV9 Gm22298-201ENSMUST00000082662 133 ntBASIC-0,71□□□□□ -2,52
Scn5aQ9JJV9 Gm23306-201ENSMUST00000179058 105 ntBASIC-0,72□□□□□ -2,52
Scn5aQ9JJV9 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0,72□□□□□ -2,52
Scn5aQ9JJV9 Gm23240-201ENSMUST00000083009 121 ntBASIC-0,72□□□□□ -2,53
Scn5aQ9JJV9 Mir15b-201ENSMUST00000083646 64 ntBASIC-0,72□□□□□ -2,53
Scn5aQ9JJV9 Gm23652-201ENSMUST00000116752 107 ntBASIC-0,73□□□□□ -2,53
Scn5aQ9JJV9 Gm25712-201ENSMUST00000158634 93 ntBASIC-0,74□□□□□ -2,53
Scn5aQ9JJV9 Gm22095-201ENSMUST00000158984 150 ntBASIC-0,74□□□□□ -2,53
Scn5aQ9JJV9 Gm26051-201ENSMUST00000104642 93 ntBASIC-0,76□□□□□ -2,53
Scn5aQ9JJV9 Gm26233-201ENSMUST00000175530 70 ntBASIC-0,76□□□□□ -2,53
Scn5aQ9JJV9 Mir3064-201ENSMUST00000175532 67 ntBASIC-0,77□□□□□ -2,53
Scn5aQ9JJV9 Gm27263-201ENSMUST00000184760 76 ntBASIC-0,77□□□□□ -2,53
Scn5aQ9JJV9 Gm44311-201ENSMUST00000196448 69 ntBASIC-0,77□□□□□ -2,53
Scn5aQ9JJV9 Gm44589-201ENSMUST00000207025 115 ntBASIC-0,77□□□□□ -2,53
Scn5aQ9JJV9 Gm26262-201ENSMUST00000158024 127 ntBASIC-0,78□□□□□ -2,53
Scn5aQ9JJV9 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0,79□□□□□ -2,54
Scn5aQ9JJV9 Gm22335-201ENSMUST00000157724 99 ntBASIC-0,79□□□□□ -2,54
Scn5aQ9JJV9 Gm22813-202ENSMUST00000200346 124 ntBASIC-0,79□□□□□ -2,54
Scn5aQ9JJV9 Gm26491-201ENSMUST00000179268 121 ntBASIC-0,8□□□□□ -2,54
Scn5aQ9JJV9 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0,8□□□□□ -2,54
Scn5aQ9JJV9 Gm22305-201ENSMUST00000082690 108 ntBASIC-0,81□□□□□ -2,54
Scn5aQ9JJV9 Gm26131-201ENSMUST00000082725 110 ntBASIC-0,81□□□□□ -2,54
Scn5aQ9JJV9 Gm23590-201ENSMUST00000157661 104 ntBASIC-0,81□□□□□ -2,54
Scn5aQ9JJV9 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0,81□□□□□ -2,54
Scn5aQ9JJV9 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0,81□□□□□ -2,54
Scn5aQ9JJV9 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0,81□□□□□ -2,54
Scn5aQ9JJV9 Mir702-201ENSMUST00000102285 109 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Mir1839-201ENSMUST00000175366 127 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Mir7231-201ENSMUST00000196252 61 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Gm25681-201ENSMUST00000083938 106 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Gm26375-201ENSMUST00000101829 106 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Gm23909-201ENSMUST00000104598 131 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Gm24108-201ENSMUST00000175495 77 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Gm26124-201ENSMUST00000083359 108 ntBASIC-0,82□□□□□ -2,54
Scn5aQ9JJV9 Gm22016-201ENSMUST00000158793 114 ntBASIC-0,83□□□□□ -2,54
Scn5aQ9JJV9 Gm24674-201ENSMUST00000179194 104 ntBASIC-0,83□□□□□ -2,54
Scn5aQ9JJV9 Gm24203-201ENSMUST00000082949 114 ntBASIC-0,84□□□□□ -2,54
Scn5aQ9JJV9 Gm25087-201ENSMUST00000101992 78 ntBASIC-0,84□□□□□ -2,54
Scn5aQ9JJV9 Gm23607-201ENSMUST00000104550 126 ntBASIC-0,84□□□□□ -2,54
Scn5aQ9JJV9 Mir302c-201ENSMUST00000083548 68 ntBASIC-0,84□□□□□ -2,54
Scn5aQ9JJV9 Gm24704-201ENSMUST00000093715 107 ntBASIC-0,84□□□□□ -2,54
Scn5aQ9JJV9 Gm26467-201ENSMUST00000097257 78 ntBASIC-0,84□□□□□ -2,54
Scn5aQ9JJV9 Mir6961-201ENSMUST00000183874 67 ntBASIC-0,85□□□□□ -2,55
Scn5aQ9JJV9 Gm24459-201ENSMUST00000082730 86 ntBASIC-0,85□□□□□ -2,55
Scn5aQ9JJV9 Gm24714-201ENSMUST00000102382 101 ntBASIC-0,86□□□□□ -2,55
Scn5aQ9JJV9 Gm25158-201ENSMUST00000177681 121 ntBASIC-0,86□□□□□ -2,55
Scn5aQ9JJV9 Gm26229-201ENSMUST00000179699 121 ntBASIC-0,86□□□□□ -2,55
Scn5aQ9JJV9 Gm22938-201ENSMUST00000103956 120 ntBASIC-0,86□□□□□ -2,55
Scn5aQ9JJV9 Gm25648-201ENSMUST00000177844 79 ntBASIC-0,86□□□□□ -2,55
Scn5aQ9JJV9 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0,87□□□□□ -2,55
Scn5aQ9JJV9 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0,87□□□□□ -2,55
Scn5aQ9JJV9 Gm24331-201ENSMUST00000175099 67 ntBASIC-0,87□□□□□ -2,55
Scn5aQ9JJV9 Gm23801-201ENSMUST00000175561 67 ntBASIC-0,87□□□□□ -2,55
Scn5aQ9JJV9 Gm24485-201ENSMUST00000178283 67 ntBASIC-0,87□□□□□ -2,55
Scn5aQ9JJV9 Gm27798-201ENSMUST00000184989 71 ntBASIC-0,87□□□□□ -2,55
Scn5aQ9JJV9 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0,88□□□□□ -2,55
Scn5aQ9JJV9 Gm22717-201ENSMUST00000122703 171 ntBASIC-0,89□□□□□ -2,55
Scn5aQ9JJV9 Gm24495-201ENSMUST00000178575 79 ntBASIC-0,89□□□□□ -2,55
Scn5aQ9JJV9 Gm22253-201ENSMUST00000179870 79 ntBASIC-0,89□□□□□ -2,55
Scn5aQ9JJV9 Mir6957-201ENSMUST00000183708 64 ntBASIC-0,89□□□□□ -2,55
Scn5aQ9JJV9 Gm22251-201ENSMUST00000083216 107 ntBASIC-0,9□□□□□ -2,55
Scn5aQ9JJV9 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0,9□□□□□ -2,55
Scn5aQ9JJV9 Gm23335-201ENSMUST00000117021 90 ntBASIC-0,91□□□□□ -2,55
Scn5aQ9JJV9 Gm23376-201ENSMUST00000082938 160 ntBASIC-0,91□□□□□ -2,55
Scn5aQ9JJV9 Gm20305-201ENSMUST00000193226 177 ntBASIC-0,91□□□□□ -2,56
Scn5aQ9JJV9 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0,91□□□□□ -2,56
Scn5aQ9JJV9 Gm25382-201ENSMUST00000157811 97 ntBASIC-0,92□□□□□ -2,56
Scn5aQ9JJV9 Gm23072-201ENSMUST00000158243 123 ntBASIC-0,92□□□□□ -2,56
Retrieved 100 of 76,532 protein–RNA pairs in 156,8 ms