Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.08□□□□□ -2.42
Ushbp1Q8R370 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
Ushbp1Q8R370 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.09□□□□□ -2.42
Ushbp1Q8R370 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.09□□□□□ -2.42
Ushbp1Q8R370 Gm25552-201ENSMUST00000158081 91 ntBASIC-0.09□□□□□ -2.42
Ushbp1Q8R370 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.09□□□□□ -2.42
Ushbp1Q8R370 Mir574-201ENSMUST00000103854 78 ntBASIC-0.1□□□□□ -2.43
Ushbp1Q8R370 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.1□□□□□ -2.43
Ushbp1Q8R370 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.11□□□□□ -2.43
Ushbp1Q8R370 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.11□□□□□ -2.43
Ushbp1Q8R370 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.12□□□□□ -2.43
Ushbp1Q8R370 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.12□□□□□ -2.43
Ushbp1Q8R370 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.13□□□□□ -2.43
Ushbp1Q8R370 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.13□□□□□ -2.43
Ushbp1Q8R370 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.13□□□□□ -2.43
Ushbp1Q8R370 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.13□□□□□ -2.43
Ushbp1Q8R370 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0.14□□□□□ -2.43
Ushbp1Q8R370 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.14□□□□□ -2.43
Ushbp1Q8R370 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
Ushbp1Q8R370 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.15□□□□□ -2.43
Ushbp1Q8R370 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.15□□□□□ -2.43
Ushbp1Q8R370 Gm25648-201ENSMUST00000177844 79 ntBASIC-0.16□□□□□ -2.44
Ushbp1Q8R370 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.17□□□□□ -2.44
Ushbp1Q8R370 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.17□□□□□ -2.44
Ushbp1Q8R370 Gm23826-201ENSMUST00000157394 119 ntBASIC-0.17□□□□□ -2.44
Ushbp1Q8R370 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.17□□□□□ -2.44
Ushbp1Q8R370 Gm25183-201ENSMUST00000157752 106 ntBASIC-0.18□□□□□ -2.44
Ushbp1Q8R370 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.18□□□□□ -2.44
Ushbp1Q8R370 Gm23649-201ENSMUST00000179007 107 ntBASIC-0.18□□□□□ -2.44
Ushbp1Q8R370 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.19□□□□□ -2.44
Ushbp1Q8R370 Gm27450-201ENSMUST00000104632 90 ntBASIC-0.2□□□□□ -2.44
Ushbp1Q8R370 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.2□□□□□ -2.44
Ushbp1Q8R370 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.2□□□□□ -2.44
Ushbp1Q8R370 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.2□□□□□ -2.44
Ushbp1Q8R370 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.21□□□□□ -2.44
Ushbp1Q8R370 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.21□□□□□ -2.44
Ushbp1Q8R370 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.21□□□□□ -2.44
Ushbp1Q8R370 AC157278.1-201ENSMUST00000221621 148 ntBASIC-0.21□□□□□ -2.44
Ushbp1Q8R370 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.21□□□□□ -2.44
Ushbp1Q8R370 Gm25354-201ENSMUST00000179110 105 ntBASIC-0.22□□□□□ -2.44
Ushbp1Q8R370 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.22□□□□□ -2.44
Ushbp1Q8R370 Snord57-201ENSMUST00000083338 72 ntBASIC-0.22□□□□□ -2.44
Ushbp1Q8R370 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.22□□□□□ -2.44
Ushbp1Q8R370 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.23□□□□□ -2.45
Ushbp1Q8R370 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.24□□□□□ -2.45
Ushbp1Q8R370 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.24□□□□□ -2.45
Ushbp1Q8R370 Gm23730-201ENSMUST00000083236 107 ntBASIC-0.24□□□□□ -2.45
Ushbp1Q8R370 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.24□□□□□ -2.45
Ushbp1Q8R370 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.25□□□□□ -2.45
Ushbp1Q8R370 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.26□□□□□ -2.45
Ushbp1Q8R370 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.26□□□□□ -2.45
Ushbp1Q8R370 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.26□□□□□ -2.45
Ushbp1Q8R370 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.27□□□□□ -2.45
Ushbp1Q8R370 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.27□□□□□ -2.45
Ushbp1Q8R370 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.29□□□□□ -2.46
Ushbp1Q8R370 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.29□□□□□ -2.46
Ushbp1Q8R370 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.29□□□□□ -2.46
Ushbp1Q8R370 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.29□□□□□ -2.46
Ushbp1Q8R370 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.3□□□□□ -2.46
Ushbp1Q8R370 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.3□□□□□ -2.46
Ushbp1Q8R370 Gm22965-201ENSMUST00000157958 101 ntBASIC-0.3□□□□□ -2.46
Ushbp1Q8R370 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.3□□□□□ -2.46
Ushbp1Q8R370 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.31□□□□□ -2.46
Ushbp1Q8R370 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.31□□□□□ -2.46
Ushbp1Q8R370 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.32□□□□□ -2.46
Ushbp1Q8R370 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.32□□□□□ -2.46
Ushbp1Q8R370 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.32□□□□□ -2.46
Ushbp1Q8R370 Gm26139-201ENSMUST00000180098 107 ntBASIC-0.32□□□□□ -2.46
Ushbp1Q8R370 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.32□□□□□ -2.46
Ushbp1Q8R370 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.33□□□□□ -2.46
Ushbp1Q8R370 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.33□□□□□ -2.46
Ushbp1Q8R370 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.34□□□□□ -2.46
Ushbp1Q8R370 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ushbp1Q8R370 Gm22039-201ENSMUST00000157278 132 ntBASIC-0.35□□□□□ -2.47
Ushbp1Q8R370 Gm24259-201ENSMUST00000083740 107 ntBASIC-0.36□□□□□ -2.47
Ushbp1Q8R370 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.37□□□□□ -2.47
Ushbp1Q8R370 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.37□□□□□ -2.47
Ushbp1Q8R370 Gm24996-201ENSMUST00000158390 99 ntBASIC-0.37□□□□□ -2.47
Ushbp1Q8R370 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.38□□□□□ -2.47
Ushbp1Q8R370 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.38□□□□□ -2.47
Ushbp1Q8R370 Mir702-201ENSMUST00000102285 109 ntBASIC-0.39□□□□□ -2.47
Ushbp1Q8R370 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.39□□□□□ -2.47
Ushbp1Q8R370 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
Ushbp1Q8R370 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.4□□□□□ -2.47
Ushbp1Q8R370 Gm25950-201ENSMUST00000175331 100 ntBASIC-0.4□□□□□ -2.47
Ushbp1Q8R370 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.41□□□□□ -2.48
Ushbp1Q8R370 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.41□□□□□ -2.48
Ushbp1Q8R370 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.42□□□□□ -2.48
Ushbp1Q8R370 Gm24396-201ENSMUST00000116905 93 ntBASIC-0.42□□□□□ -2.48
Ushbp1Q8R370 Gm22746-201ENSMUST00000082494 107 ntBASIC-0.43□□□□□ -2.48
Ushbp1Q8R370 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.44□□□□□ -2.48
Ushbp1Q8R370 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.44□□□□□ -2.48
Ushbp1Q8R370 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.45□□□□□ -2.48
Ushbp1Q8R370 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.45□□□□□ -2.48
Ushbp1Q8R370 Mir96-201ENSMUST00000083652 106 ntBASIC-0.46□□□□□ -2.48
Ushbp1Q8R370 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.47□□□□□ -2.48
Ushbp1Q8R370 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.47□□□□□ -2.48
Ushbp1Q8R370 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.48□□□□□ -2.49
Ushbp1Q8R370 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.48□□□□□ -2.49
Ushbp1Q8R370 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 176.2 ms