Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22239-201ENSMUST00000175220 103 ntBASIC0,82□□□□□ -2,28
Trim47Q8C0E3 Gm24323-201ENSMUST00000175342 77 ntBASIC0,82□□□□□ -2,28
Trim47Q8C0E3 Mir3109-201ENSMUST00000175301 88 ntBASIC0,81□□□□□ -2,28
Trim47Q8C0E3 Gm22232-201ENSMUST00000104654 94 ntBASIC0,79□□□□□ -2,28
Trim47Q8C0E3 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0,79□□□□□ -2,28
Trim47Q8C0E3 Gm38113-201ENSMUST00000193704 201 ntBASIC0,79□□□□□ -2,28
Trim47Q8C0E3 Gm23735-201ENSMUST00000082551 134 ntBASIC0,79□□□□□ -2,28
Trim47Q8C0E3 Gm27749-201ENSMUST00000183651 125 ntBASIC0,78□□□□□ -2,28
Trim47Q8C0E3 Gm38208-201ENSMUST00000192476 114 ntBASIC0,78□□□□□ -2,28
Trim47Q8C0E3 Mir702-201ENSMUST00000102285 109 ntBASIC0,77□□□□□ -2,29
Trim47Q8C0E3 Gm45541-201ENSMUST00000210443 54 ntBASIC0,77□□□□□ -2,29
Trim47Q8C0E3 Gm23607-201ENSMUST00000104550 126 ntBASIC0,76□□□□□ -2,29
Trim47Q8C0E3 Gm24772-201ENSMUST00000158507 110 ntBASIC0,74□□□□□ -2,29
Trim47Q8C0E3 Gm27784-201ENSMUST00000184926 113 ntBASIC0,74□□□□□ -2,29
Trim47Q8C0E3 Gm37646-201ENSMUST00000191756 111 ntBASIC0,74□□□□□ -2,29
Trim47Q8C0E3 Mir6896-201ENSMUST00000198033 73 ntBASIC0,74□□□□□ -2,29
Trim47Q8C0E3 Gm22838-201ENSMUST00000158437 99 ntBASIC0,73□□□□□ -2,29
Trim47Q8C0E3 Gm26285-201ENSMUST00000177923 107 ntBASIC0,73□□□□□ -2,29
Trim47Q8C0E3 Gm23622-201ENSMUST00000082460 107 ntBASIC0,73□□□□□ -2,29
Trim47Q8C0E3 Gm24194-201ENSMUST00000116805 90 ntBASIC0,72□□□□□ -2,29
Trim47Q8C0E3 Gm20473-201ENSMUST00000173064 112 ntBASIC0,72□□□□□ -2,29
Trim47Q8C0E3 Mir295-201ENSMUST00000104694 69 ntBASIC0,69□□□□□ -2,3
Trim47Q8C0E3 Gm23605-201ENSMUST00000157255 127 ntBASIC0,69□□□□□ -2,3
Trim47Q8C0E3 Gm25791-201ENSMUST00000083292 137 ntBASIC0,69□□□□□ -2,3
Trim47Q8C0E3 Mir216a-201ENSMUST00000083605 72 ntBASIC0,69□□□□□ -2,3
Trim47Q8C0E3 Gm24963-201ENSMUST00000157916 144 ntBASIC0,68□□□□□ -2,3
Trim47Q8C0E3 Gm27607-201ENSMUST00000185162 122 ntBASIC0,67□□□□□ -2,3
Trim47Q8C0E3 Gm25375-201ENSMUST00000158157 135 ntBASIC0,66□□□□□ -2,3
Trim47Q8C0E3 Gm25862-201ENSMUST00000158250 129 ntBASIC0,66□□□□□ -2,3
Trim47Q8C0E3 Mir5124a-201ENSMUST00000175528 72 ntBASIC0,66□□□□□ -2,3
Trim47Q8C0E3 Gm26236-201ENSMUST00000175536 137 ntBASIC0,66□□□□□ -2,3
Trim47Q8C0E3 Gm23159-201ENSMUST00000175088 77 ntBASIC0,64□□□□□ -2,31
Trim47Q8C0E3 Mir7651-201ENSMUST00000184154 64 ntBASIC0,61□□□□□ -2,31
Trim47Q8C0E3 Mir669f-201ENSMUST00000103850 121 ntBASIC0,6□□□□□ -2,31
Trim47Q8C0E3 Gm25497-201ENSMUST00000104425 132 ntBASIC0,6□□□□□ -2,31
Trim47Q8C0E3 Gm23442-201ENSMUST00000082919 134 ntBASIC0,6□□□□□ -2,31
Trim47Q8C0E3 Gm28001-201ENSMUST00000183561 117 ntBASIC0,59□□□□□ -2,31
Trim47Q8C0E3 Gm25431-201ENSMUST00000101978 107 ntBASIC0,58□□□□□ -2,32
Trim47Q8C0E3 Gm23909-201ENSMUST00000104598 131 ntBASIC0,58□□□□□ -2,32
Trim47Q8C0E3 Gm24467-201ENSMUST00000157887 126 ntBASIC0,58□□□□□ -2,32
Trim47Q8C0E3 Gm24843-201ENSMUST00000158682 76 ntBASIC0,58□□□□□ -2,32
Trim47Q8C0E3 Gm26303-201ENSMUST00000116845 119 ntBASIC0,57□□□□□ -2,32
Trim47Q8C0E3 Gm25510-201ENSMUST00000116986 123 ntBASIC0,57□□□□□ -2,32
Trim47Q8C0E3 Mir344-2-201ENSMUST00000175446 80 ntBASIC0,57□□□□□ -2,32
Trim47Q8C0E3 Mir327-201ENSMUST00000199328 69 ntBASIC0,57□□□□□ -2,32
Trim47Q8C0E3 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0,57□□□□□ -2,32
Trim47Q8C0E3 Gm25388-201ENSMUST00000157339 151 ntBASIC0,56□□□□□ -2,32
Trim47Q8C0E3 Gm23994-201ENSMUST00000158059 88 ntBASIC0,55□□□□□ -2,32
Trim47Q8C0E3 Gm43432-201ENSMUST00000196352 121 ntBASIC0,55□□□□□ -2,32
Trim47Q8C0E3 Scarna8-201ENSMUST00000158333 131 ntBASIC0,53□□□□□ -2,32
Trim47Q8C0E3 Gm22088-201ENSMUST00000158341 117 ntBASIC0,53□□□□□ -2,32
Trim47Q8C0E3 Mir466q-201ENSMUST00000175249 76 ntBASIC0,53□□□□□ -2,32
Trim47Q8C0E3 Gm24971-201ENSMUST00000175581 110 ntBASIC0,53□□□□□ -2,32
Trim47Q8C0E3 Gm25023-201ENSMUST00000082977 107 ntBASIC0,53□□□□□ -2,32
Trim47Q8C0E3 Gm23278-201ENSMUST00000157911 143 ntBASIC0,52□□□□□ -2,33
Trim47Q8C0E3 Gm22925-201ENSMUST00000174956 102 ntBASIC0,52□□□□□ -2,33
Trim47Q8C0E3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0,51□□□□□ -2,33
Trim47Q8C0E3 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0,51□□□□□ -2,33
Trim47Q8C0E3 Snord91a-201ENSMUST00000104305 93 ntBASIC0,5□□□□□ -2,33
Trim47Q8C0E3 Gm27475-201ENSMUST00000183420 61 ntBASIC0,5□□□□□ -2,33
Trim47Q8C0E3 Mir669m-2-201ENSMUST00000158355 98 ntBASIC0,49□□□□□ -2,33
Trim47Q8C0E3 Mir7077-201ENSMUST00000183991 57 ntBASIC0,49□□□□□ -2,33
Trim47Q8C0E3 Gm23531-201ENSMUST00000104567 68 ntBASIC0,48□□□□□ -2,33
Trim47Q8C0E3 Mir3967-201ENSMUST00000198710 68 ntBASIC0,48□□□□□ -2,33
Trim47Q8C0E3 Gm24097-201ENSMUST00000178720 107 ntBASIC0,47□□□□□ -2,33
Trim47Q8C0E3 Gm44828-201ENSMUST00000203745 106 ntBASIC0,47□□□□□ -2,33
Trim47Q8C0E3 Snord42b-201ENSMUST00000083742 69 ntBASIC0,47□□□□□ -2,33
Trim47Q8C0E3 Gm44347-201ENSMUST00000199602 108 ntBASIC0,46□□□□□ -2,34
Trim47Q8C0E3 Gm44328-201ENSMUST00000199331 75 ntBASIC0,45□□□□□ -2,34
Trim47Q8C0E3 Mir18b-201ENSMUST00000103923 83 ntBASIC0,44□□□□□ -2,34
Trim47Q8C0E3 Gm25885-201ENSMUST00000157779 109 ntBASIC0,44□□□□□ -2,34
Trim47Q8C0E3 Gm23821-201ENSMUST00000158738 106 ntBASIC0,44□□□□□ -2,34
Trim47Q8C0E3 Gm42773-201ENSMUST00000196962 148 ntBASIC0,44□□□□□ -2,34
Trim47Q8C0E3 Gm25995-201ENSMUST00000175396 142 ntBASIC0,41□□□□□ -2,34
Trim47Q8C0E3 Mir8107-201ENSMUST00000184024 117 ntBASIC0,41□□□□□ -2,34
Trim47Q8C0E3 Gm44375-201ENSMUST00000196657 150 ntBASIC0,41□□□□□ -2,34
Trim47Q8C0E3 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0,4□□□□□ -2,35
Trim47Q8C0E3 Gm24833-201ENSMUST00000116775 120 ntBASIC0,4□□□□□ -2,35
Trim47Q8C0E3 Gm22759-201ENSMUST00000102276 96 ntBASIC0,39□□□□□ -2,35
Trim47Q8C0E3 Snord58b-201ENSMUST00000082937 66 ntBASIC0,38□□□□□ -2,35
Trim47Q8C0E3 Gm22305-201ENSMUST00000082690 108 ntBASIC0,37□□□□□ -2,35
Trim47Q8C0E3 Gm26116-201ENSMUST00000175600 77 ntBASIC0,36□□□□□ -2,35
Trim47Q8C0E3 Mir141-201ENSMUST00000083540 72 ntBASIC0,36□□□□□ -2,35
Trim47Q8C0E3 Mir710-201ENSMUST00000102088 110 ntBASIC0,35□□□□□ -2,35
Trim47Q8C0E3 Gm25137-201ENSMUST00000083251 110 ntBASIC0,34□□□□□ -2,36
Trim47Q8C0E3 Gm22197-201ENSMUST00000116866 58 ntBASIC0,33□□□□□ -2,36
Trim47Q8C0E3 AC154832.1-201ENSMUST00000228928 141 ntBASIC0,33□□□□□ -2,36
Trim47Q8C0E3 Gm24793-201ENSMUST00000104289 132 ntBASIC0,32□□□□□ -2,36
Trim47Q8C0E3 n-R5s18-201ENSMUST00000122740 121 ntBASIC0,32□□□□□ -2,36
Trim47Q8C0E3 Gm25249-201ENSMUST00000175471 78 ntBASIC0,31□□□□□ -2,36
Trim47Q8C0E3 Gm26152-201ENSMUST00000157427 101 ntBASIC0,3□□□□□ -2,36
Trim47Q8C0E3 AC167019.1-201ENSMUST00000227913 106 ntBASIC0,3□□□□□ -2,36
Trim47Q8C0E3 Snord85-201ENSMUST00000083262 73 ntBASIC0,3□□□□□ -2,36
Trim47Q8C0E3 Gm22602-201ENSMUST00000157596 95 ntBASIC0,28□□□□□ -2,36
Trim47Q8C0E3 Mir136-201ENSMUST00000199494 62 ntBASIC0,28□□□□□ -2,36
Trim47Q8C0E3 Gm44303-201ENSMUST00000196348 83 ntBASIC0,27□□□□□ -2,37
Trim47Q8C0E3 Gm24336-201ENSMUST00000104203 146 ntBASIC0,26□□□□□ -2,37
Trim47Q8C0E3 Gm23315-201ENSMUST00000158003 109 ntBASIC0,26□□□□□ -2,37
Trim47Q8C0E3 Gm23811-201ENSMUST00000175155 84 ntBASIC0,25□□□□□ -2,37
Trim47Q8C0E3 Mir6904-201ENSMUST00000183443 67 ntBASIC0,25□□□□□ -2,37
Retrieved 100 of 76,532 protein–RNA pairs in 127,4 ms