Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25326-201ENSMUST00000101903 107 ntBASIC0.23□□□□□ -2.37
Trim56Q80VI1 Gm23749-201ENSMUST00000104223 131 ntBASIC0.23□□□□□ -2.37
Trim56Q80VI1 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.22□□□□□ -2.37
Trim56Q80VI1 Gm24843-201ENSMUST00000158682 76 ntBASIC0.21□□□□□ -2.38
Trim56Q80VI1 Gm22746-201ENSMUST00000082494 107 ntBASIC0.21□□□□□ -2.38
Trim56Q80VI1 Gm23173-201ENSMUST00000157161 160 ntBASIC0.2□□□□□ -2.38
Trim56Q80VI1 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.2□□□□□ -2.38
Trim56Q80VI1 Gm23573-201ENSMUST00000104408 107 ntBASIC0.19□□□□□ -2.38
Trim56Q80VI1 Snord85-201ENSMUST00000083262 73 ntBASIC0.19□□□□□ -2.38
Trim56Q80VI1 Mir142b-201ENSMUST00000083486 115 ntBASIC0.19□□□□□ -2.38
Trim56Q80VI1 Gm37832-201ENSMUST00000118935 189 ntBASIC0.18□□□□□ -2.38
Trim56Q80VI1 Mir327-201ENSMUST00000199328 69 ntBASIC0.18□□□□□ -2.38
Trim56Q80VI1 Gm24903-201ENSMUST00000158131 126 ntBASIC0.16□□□□□ -2.38
Trim56Q80VI1 Gm22157-201ENSMUST00000158410 104 ntBASIC0.16□□□□□ -2.38
Trim56Q80VI1 Gm22401-201ENSMUST00000174927 117 ntBASIC0.16□□□□□ -2.38
Trim56Q80VI1 Gm44375-201ENSMUST00000196657 150 ntBASIC0.14□□□□□ -2.39
Trim56Q80VI1 Gm22368-201ENSMUST00000102416 109 ntBASIC0.13□□□□□ -2.39
Trim56Q80VI1 Gm22962-201ENSMUST00000157962 73 ntBASIC0.13□□□□□ -2.39
Trim56Q80VI1 Gm27798-201ENSMUST00000184989 71 ntBASIC0.13□□□□□ -2.39
Trim56Q80VI1 Gm25524-201ENSMUST00000101821 107 ntBASIC0.12□□□□□ -2.39
Trim56Q80VI1 Gm24508-201ENSMUST00000180104 107 ntBASIC0.12□□□□□ -2.39
Trim56Q80VI1 Gm22335-201ENSMUST00000157724 99 ntBASIC0.11□□□□□ -2.39
Trim56Q80VI1 Gm25510-201ENSMUST00000116986 123 ntBASIC0.1□□□□□ -2.39
Trim56Q80VI1 Gm22327-201ENSMUST00000158899 108 ntBASIC0.1□□□□□ -2.39
Trim56Q80VI1 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Trim56Q80VI1 Mir191-201ENSMUST00000196210 74 ntBASIC0.09□□□□□ -2.4
Trim56Q80VI1 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.09□□□□□ -2.4
Trim56Q80VI1 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.08□□□□□ -2.4
Trim56Q80VI1 Gm22474-201ENSMUST00000179407 107 ntBASIC0.08□□□□□ -2.4
Trim56Q80VI1 Mir6915-201ENSMUST00000198839 69 ntBASIC0.08□□□□□ -2.4
Trim56Q80VI1 Gm22357-201ENSMUST00000082882 83 ntBASIC0.07□□□□□ -2.4
Trim56Q80VI1 Gm23240-201ENSMUST00000083009 121 ntBASIC0.07□□□□□ -2.4
Trim56Q80VI1 Gm27784-201ENSMUST00000184926 113 ntBASIC0.06□□□□□ -2.4
Trim56Q80VI1 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.06□□□□□ -2.4
Trim56Q80VI1 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Trim56Q80VI1 Mir382-201ENSMUST00000083494 76 ntBASIC0.05□□□□□ -2.4
Trim56Q80VI1 Mir1948-201ENSMUST00000157325 85 ntBASIC0.04□□□□□ -2.4
Trim56Q80VI1 Gm26210-201ENSMUST00000158680 91 ntBASIC0.04□□□□□ -2.4
Trim56Q80VI1 Gm45688-201ENSMUST00000210002 101 ntBASIC0.04□□□□□ -2.4
Trim56Q80VI1 Gm24377-201ENSMUST00000104398 131 ntBASIC0.03□□□□□ -2.4
Trim56Q80VI1 Gm26052-201ENSMUST00000104646 84 ntBASIC0.03□□□□□ -2.4
Trim56Q80VI1 Gm25108-201ENSMUST00000122473 78 ntBASIC0.03□□□□□ -2.4
Trim56Q80VI1 Gm24297-201ENSMUST00000158300 68 ntBASIC0.02□□□□□ -2.41
Trim56Q80VI1 Gm25772-201ENSMUST00000158574 56 ntBASIC0.02□□□□□ -2.41
Trim56Q80VI1 Gm23607-201ENSMUST00000104550 126 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Gm25249-201ENSMUST00000175471 78 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Gm25158-201ENSMUST00000177681 121 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Gm26229-201ENSMUST00000179699 121 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Gm6607-201ENSMUST00000215035 328 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Gm24256-201ENSMUST00000083696 84 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Snord42b-201ENSMUST00000083742 69 ntBASIC0.01□□□□□ -2.41
Trim56Q80VI1 Mir702-201ENSMUST00000102285 109 ntBASIC0□□□□□ -2.41
Trim56Q80VI1 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.01□□□□□ -2.41
Trim56Q80VI1 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.01□□□□□ -2.41
Trim56Q80VI1 Mir672-201ENSMUST00000102331 100 ntBASIC-0.02□□□□□ -2.41
Trim56Q80VI1 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.03□□□□□ -2.41
Trim56Q80VI1 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.03□□□□□ -2.41
Trim56Q80VI1 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.03□□□□□ -2.41
Trim56Q80VI1 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.03□□□□□ -2.41
Trim56Q80VI1 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.03□□□□□ -2.41
Trim56Q80VI1 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.05□□□□□ -2.42
Trim56Q80VI1 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.05□□□□□ -2.42
Trim56Q80VI1 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.05□□□□□ -2.42
Trim56Q80VI1 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.05□□□□□ -2.42
Trim56Q80VI1 Gm24710-201ENSMUST00000175235 101 ntBASIC-0.06□□□□□ -2.42
Trim56Q80VI1 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.06□□□□□ -2.42
Trim56Q80VI1 Gm24135-201ENSMUST00000179085 101 ntBASIC-0.06□□□□□ -2.42
Trim56Q80VI1 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.06□□□□□ -2.42
Trim56Q80VI1 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.07□□□□□ -2.42
Trim56Q80VI1 Gm25779-201ENSMUST00000116710 95 ntBASIC-0.07□□□□□ -2.42
Trim56Q80VI1 Gm25222-201ENSMUST00000158199 126 ntBASIC-0.08□□□□□ -2.42
Trim56Q80VI1 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.1□□□□□ -2.43
Trim56Q80VI1 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.1□□□□□ -2.43
Trim56Q80VI1 Gm23961-201ENSMUST00000104685 97 ntBASIC-0.11□□□□□ -2.43
Trim56Q80VI1 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.11□□□□□ -2.43
Trim56Q80VI1 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.11□□□□□ -2.43
Trim56Q80VI1 Mir214-201ENSMUST00000083582 110 ntBASIC-0.11□□□□□ -2.43
Trim56Q80VI1 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.12□□□□□ -2.43
Trim56Q80VI1 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.12□□□□□ -2.43
Trim56Q80VI1 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.13□□□□□ -2.43
Trim56Q80VI1 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.13□□□□□ -2.43
Trim56Q80VI1 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.14□□□□□ -2.43
Trim56Q80VI1 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.14□□□□□ -2.43
Trim56Q80VI1 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.14□□□□□ -2.43
Trim56Q80VI1 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.15□□□□□ -2.43
Trim56Q80VI1 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.15□□□□□ -2.43
Trim56Q80VI1 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.15□□□□□ -2.43
Trim56Q80VI1 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.15□□□□□ -2.43
Trim56Q80VI1 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Trim56Q80VI1 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.17□□□□□ -2.44
Trim56Q80VI1 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.17□□□□□ -2.44
Trim56Q80VI1 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.17□□□□□ -2.44
Trim56Q80VI1 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.17□□□□□ -2.44
Trim56Q80VI1 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.17□□□□□ -2.44
Trim56Q80VI1 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.19□□□□□ -2.44
Trim56Q80VI1 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.2□□□□□ -2.44
Trim56Q80VI1 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.2□□□□□ -2.44
Trim56Q80VI1 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms