Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm25209-201ENSMUST00000179576 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm26392-201ENSMUST00000179661 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm25230-201ENSMUST00000179740 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm26434-201ENSMUST00000179778 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm25741-201ENSMUST00000179825 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm24759-201ENSMUST00000179827 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm24219-201ENSMUST00000179861 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm23254-201ENSMUST00000097244 79 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm10813-201ENSMUST00000099936 90 ntBASIC-2.95□□□□□ -2.88
Upf3bQ3ULL6 Gm26441-201ENSMUST00000082590 104 ntBASIC-2.96□□□□□ -2.88
Upf3bQ3ULL6 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.97□□□□□ -2.88
Upf3bQ3ULL6 Mir192-201ENSMUST00000083589 89 ntBASIC-2.97□□□□□ -2.88
Upf3bQ3ULL6 Gm22004-201ENSMUST00000101884 107 ntBASIC-2.98□□□□□ -2.89
Upf3bQ3ULL6 Gm26468-201ENSMUST00000158644 106 ntBASIC-2.98□□□□□ -2.89
Upf3bQ3ULL6 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.98□□□□□ -2.89
Upf3bQ3ULL6 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-2.98□□□□□ -2.89
Upf3bQ3ULL6 Mir466-201ENSMUST00000093591 73 ntBASIC-2.98□□□□□ -2.89
Upf3bQ3ULL6 Mir7231-201ENSMUST00000196252 61 ntBASIC-2.99□□□□□ -2.89
Upf3bQ3ULL6 Mir351-201ENSMUST00000083569 99 ntBASIC-2.99□□□□□ -2.89
Upf3bQ3ULL6 Gm2077-201ENSMUST00000195017 319 ntBASIC-3□□□□□ -2.89
Upf3bQ3ULL6 Mir539-201ENSMUST00000102109 74 ntBASIC-3.01□□□□□ -2.89
Upf3bQ3ULL6 Gm25285-201ENSMUST00000178951 90 ntBASIC-3.01□□□□□ -2.89
Upf3bQ3ULL6 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-3.01□□□□□ -2.89
Upf3bQ3ULL6 Gm37646-201ENSMUST00000191756 111 ntBASIC-3.01□□□□□ -2.89
Upf3bQ3ULL6 Mir876-201ENSMUST00000104659 81 ntBASIC-3.02□□□□□ -2.89
Upf3bQ3ULL6 Gm24806-201ENSMUST00000117036 90 ntBASIC-3.02□□□□□ -2.89
Upf3bQ3ULL6 Gm26491-201ENSMUST00000179268 121 ntBASIC-3.03□□□□□ -2.89
Upf3bQ3ULL6 Gm22357-201ENSMUST00000082882 83 ntBASIC-3.03□□□□□ -2.89
Upf3bQ3ULL6 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-3.03□□□□□ -2.89
Upf3bQ3ULL6 Gm26253-201ENSMUST00000122493 103 ntBASIC-3.04□□□□□ -2.9
Upf3bQ3ULL6 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-3.04□□□□□ -2.9
Upf3bQ3ULL6 Gm23369-201ENSMUST00000175406 105 ntBASIC-3.04□□□□□ -2.9
Upf3bQ3ULL6 Gm23138-201ENSMUST00000083365 103 ntBASIC-3.04□□□□□ -2.9
Upf3bQ3ULL6 Gm23790-201ENSMUST00000083013 107 ntBASIC-3.05□□□□□ -2.9
Upf3bQ3ULL6 Gm24650-201ENSMUST00000157105 103 ntBASIC-3.06□□□□□ -2.9
Upf3bQ3ULL6 Gm24538-201ENSMUST00000082612 107 ntBASIC-3.09□□□□□ -2.9
Upf3bQ3ULL6 Mir15b-201ENSMUST00000083646 64 ntBASIC-3.09□□□□□ -2.9
Upf3bQ3ULL6 CT030170.1-201ENSMUST00000222183 148 ntBASIC-3.1□□□□□ -2.91
Upf3bQ3ULL6 Gm23468-201ENSMUST00000157125 108 ntBASIC-3.11□□□□□ -2.91
Upf3bQ3ULL6 Gm25401-201ENSMUST00000082975 106 ntBASIC-3.11□□□□□ -2.91
Upf3bQ3ULL6 Gm26375-201ENSMUST00000101829 106 ntBASIC-3.12□□□□□ -2.91
Upf3bQ3ULL6 Gm26466-201ENSMUST00000179615 79 ntBASIC-3.12□□□□□ -2.91
Upf3bQ3ULL6 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-3.12□□□□□ -2.91
Upf3bQ3ULL6 Gm23044-201ENSMUST00000157891 100 ntBASIC-3.13□□□□□ -2.91
Upf3bQ3ULL6 Gm23811-201ENSMUST00000175155 84 ntBASIC-3.13□□□□□ -2.91
Upf3bQ3ULL6 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-3.13□□□□□ -2.91
Upf3bQ3ULL6 Gm22602-201ENSMUST00000157596 95 ntBASIC-3.14□□□□□ -2.91
Upf3bQ3ULL6 Gm25087-201ENSMUST00000101992 78 ntBASIC-3.15□□□□□ -2.91
Upf3bQ3ULL6 Gm23349-201ENSMUST00000158432 98 ntBASIC-3.15□□□□□ -2.91
Upf3bQ3ULL6 Gm26467-201ENSMUST00000097257 78 ntBASIC-3.15□□□□□ -2.91
Upf3bQ3ULL6 Gm25920-201ENSMUST00000158307 99 ntBASIC-3.16□□□□□ -2.92
Upf3bQ3ULL6 Gm25943-201ENSMUST00000103791 90 ntBASIC-3.17□□□□□ -2.92
Upf3bQ3ULL6 Mir466o-201ENSMUST00000104832 84 ntBASIC-3.17□□□□□ -2.92
Upf3bQ3ULL6 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-3.17□□□□□ -2.92
Upf3bQ3ULL6 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-3.17□□□□□ -2.92
Upf3bQ3ULL6 Gm44347-201ENSMUST00000199602 108 ntBASIC-3.17□□□□□ -2.92
Upf3bQ3ULL6 Gm25089-201ENSMUST00000102015 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm25840-201ENSMUST00000177821 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm24952-201ENSMUST00000177909 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm23682-201ENSMUST00000178146 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm24652-201ENSMUST00000178223 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm22629-201ENSMUST00000178272 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm24021-201ENSMUST00000178435 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm22274-201ENSMUST00000178441 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm22050-201ENSMUST00000178442 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm23688-201ENSMUST00000178502 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm23944-201ENSMUST00000178607 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm26283-201ENSMUST00000178625 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm25452-201ENSMUST00000178776 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm23286-201ENSMUST00000178963 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm22640-201ENSMUST00000179035 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm25984-201ENSMUST00000179129 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm25585-201ENSMUST00000179469 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm26374-201ENSMUST00000179737 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm24040-201ENSMUST00000179786 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm25017-201ENSMUST00000179805 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm23618-201ENSMUST00000179912 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm26284-201ENSMUST00000180107 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm24570-201ENSMUST00000180314 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm24654-201ENSMUST00000180315 79 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm25023-201ENSMUST00000082977 107 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm26122-201ENSMUST00000083362 82 ntBASIC-3.18□□□□□ -2.92
Upf3bQ3ULL6 Gm24001-201ENSMUST00000158463 85 ntBASIC-3.19□□□□□ -2.92
Upf3bQ3ULL6 Gm22458-201ENSMUST00000082576 107 ntBASIC-3.19□□□□□ -2.92
Upf3bQ3ULL6 Gm25542-201ENSMUST00000116889 94 ntBASIC-3.2□□□□□ -2.92
Upf3bQ3ULL6 Mir470-201ENSMUST00000093565 75 ntBASIC-3.2□□□□□ -2.92
Upf3bQ3ULL6 Gm25903-201ENSMUST00000158492 103 ntBASIC-3.21□□□□□ -2.92
Upf3bQ3ULL6 Mir28c-201ENSMUST00000200096 75 ntBASIC-3.21□□□□□ -2.92
Upf3bQ3ULL6 Gm24097-201ENSMUST00000178720 107 ntBASIC-3.22□□□□□ -2.92
Upf3bQ3ULL6 Gm23573-201ENSMUST00000104408 107 ntBASIC-3.24□□□□□ -2.93
Upf3bQ3ULL6 Mir485-201ENSMUST00000093620 73 ntBASIC-3.24□□□□□ -2.93
Upf3bQ3ULL6 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-3.25□□□□□ -2.93
Upf3bQ3ULL6 Gm11333-201ENSMUST00000119479 148 ntBASIC-3.26□□□□□ -2.93
Upf3bQ3ULL6 Gm25297-201ENSMUST00000175490 67 ntBASIC-3.26□□□□□ -2.93
Upf3bQ3ULL6 Gm25552-201ENSMUST00000158081 91 ntBASIC-3.27□□□□□ -2.93
Upf3bQ3ULL6 Gm22401-201ENSMUST00000174927 117 ntBASIC-3.27□□□□□ -2.93
Upf3bQ3ULL6 Gm23730-201ENSMUST00000083236 107 ntBASIC-3.27□□□□□ -2.93
Upf3bQ3ULL6 mt-Tf-201ENSMUST00000082387 68 ntBASIC-3.28□□□□□ -2.93
Upf3bQ3ULL6 Mir467e-201ENSMUST00000103760 87 ntBASIC-3.29□□□□□ -2.94
Upf3bQ3ULL6 Gm25112-201ENSMUST00000122680 104 ntBASIC-3.29□□□□□ -2.94
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms