Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm25840-201ENSMUST00000177821 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm24952-201ENSMUST00000177909 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm23682-201ENSMUST00000178146 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm24652-201ENSMUST00000178223 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm22629-201ENSMUST00000178272 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm24021-201ENSMUST00000178435 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm22274-201ENSMUST00000178441 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm22050-201ENSMUST00000178442 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm23688-201ENSMUST00000178502 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm23944-201ENSMUST00000178607 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm26283-201ENSMUST00000178625 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm25452-201ENSMUST00000178776 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm23286-201ENSMUST00000178963 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm22640-201ENSMUST00000179035 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm25984-201ENSMUST00000179129 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm25585-201ENSMUST00000179469 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm26374-201ENSMUST00000179737 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm24040-201ENSMUST00000179786 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm25017-201ENSMUST00000179805 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm23618-201ENSMUST00000179912 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm26284-201ENSMUST00000180107 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm24570-201ENSMUST00000180314 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm24654-201ENSMUST00000180315 79 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.09□□□□□ -2.58
Nkx3-1P97436 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.1□□□□□ -2.59
Nkx3-1P97436 Gm23349-201ENSMUST00000158432 98 ntBASIC-1.1□□□□□ -2.59
Nkx3-1P97436 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.1□□□□□ -2.59
Nkx3-1P97436 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.1□□□□□ -2.59
Nkx3-1P97436 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.1□□□□□ -2.59
Nkx3-1P97436 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.1□□□□□ -2.59
Nkx3-1P97436 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.12□□□□□ -2.59
Nkx3-1P97436 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.12□□□□□ -2.59
Nkx3-1P97436 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.12□□□□□ -2.59
Nkx3-1P97436 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.12□□□□□ -2.59
Nkx3-1P97436 Mir494-201ENSMUST00000093632 85 ntBASIC-1.12□□□□□ -2.59
Nkx3-1P97436 Gm22286-201ENSMUST00000179708 107 ntBASIC-1.13□□□□□ -2.59
Nkx3-1P97436 Mir122-201ENSMUST00000083468 66 ntBASIC-1.13□□□□□ -2.59
Nkx3-1P97436 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.14□□□□□ -2.59
Nkx3-1P97436 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.14□□□□□ -2.59
Nkx3-1P97436 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
Nkx3-1P97436 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.14□□□□□ -2.59
Nkx3-1P97436 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.14□□□□□ -2.59
Nkx3-1P97436 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.14□□□□□ -2.59
Nkx3-1P97436 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.15□□□□□ -2.59
Nkx3-1P97436 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.15□□□□□ -2.59
Nkx3-1P97436 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.16□□□□□ -2.6
Nkx3-1P97436 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.16□□□□□ -2.6
Nkx3-1P97436 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.16□□□□□ -2.6
Nkx3-1P97436 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.16□□□□□ -2.6
Nkx3-1P97436 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.17□□□□□ -2.6
Nkx3-1P97436 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.17□□□□□ -2.6
Nkx3-1P97436 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.17□□□□□ -2.6
Nkx3-1P97436 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.17□□□□□ -2.6
Nkx3-1P97436 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.17□□□□□ -2.6
Nkx3-1P97436 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.18□□□□□ -2.6
Nkx3-1P97436 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.18□□□□□ -2.6
Nkx3-1P97436 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.18□□□□□ -2.6
Nkx3-1P97436 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.19□□□□□ -2.6
Nkx3-1P97436 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.2□□□□□ -2.6
Nkx3-1P97436 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.2□□□□□ -2.6
Nkx3-1P97436 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.2□□□□□ -2.6
Nkx3-1P97436 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.2□□□□□ -2.6
Nkx3-1P97436 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.2□□□□□ -2.6
Nkx3-1P97436 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.21□□□□□ -2.6
Nkx3-1P97436 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.21□□□□□ -2.6
Nkx3-1P97436 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.21□□□□□ -2.6
Nkx3-1P97436 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.21□□□□□ -2.6
Nkx3-1P97436 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.22□□□□□ -2.6
Nkx3-1P97436 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.22□□□□□ -2.6
Nkx3-1P97436 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.22□□□□□ -2.6
Nkx3-1P97436 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
Nkx3-1P97436 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.23□□□□□ -2.61
Nkx3-1P97436 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.23□□□□□ -2.61
Nkx3-1P97436 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-1.24□□□□□ -2.61
Nkx3-1P97436 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.24□□□□□ -2.61
Nkx3-1P97436 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.24□□□□□ -2.61
Nkx3-1P97436 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.24□□□□□ -2.61
Nkx3-1P97436 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.25□□□□□ -2.61
Nkx3-1P97436 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.26□□□□□ -2.61
Nkx3-1P97436 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.26□□□□□ -2.61
Nkx3-1P97436 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.27□□□□□ -2.61
Nkx3-1P97436 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.27□□□□□ -2.61
Nkx3-1P97436 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.27□□□□□ -2.61
Nkx3-1P97436 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.27□□□□□ -2.61
Nkx3-1P97436 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.27□□□□□ -2.61
Nkx3-1P97436 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.28□□□□□ -2.61
Nkx3-1P97436 Mir876-201ENSMUST00000104659 81 ntBASIC-1.28□□□□□ -2.61
Nkx3-1P97436 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.28□□□□□ -2.61
Nkx3-1P97436 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.28□□□□□ -2.61
Nkx3-1P97436 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.28□□□□□ -2.61
Nkx3-1P97436 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.28□□□□□ -2.61
Nkx3-1P97436 Mir379-201ENSMUST00000083564 66 ntBASIC-1.28□□□□□ -2.61
Nkx3-1P97436 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.29□□□□□ -2.62
Nkx3-1P97436 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.29□□□□□ -2.62
Nkx3-1P97436 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.3□□□□□ -2.62
Nkx3-1P97436 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.3□□□□□ -2.62
Nkx3-1P97436 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.3□□□□□ -2.62
Nkx3-1P97436 Gm20734-201ENSMUST00000216939 193 ntBASIC-1.3□□□□□ -2.62
Nkx3-1P97436 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 169 ms