Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.32□□□□□ -2.46
Col2a1P28481 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.32□□□□□ -2.46
Col2a1P28481 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.32□□□□□ -2.46
Col2a1P28481 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Col2a1P28481 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
Col2a1P28481 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.33□□□□□ -2.46
Col2a1P28481 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.33□□□□□ -2.46
Col2a1P28481 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.33□□□□□ -2.46
Col2a1P28481 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.33□□□□□ -2.46
Col2a1P28481 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.33□□□□□ -2.46
Col2a1P28481 Mir494-201ENSMUST00000093632 85 ntBASIC-0.33□□□□□ -2.46
Col2a1P28481 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.34□□□□□ -2.46
Col2a1P28481 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.34□□□□□ -2.46
Col2a1P28481 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.34□□□□□ -2.46
Col2a1P28481 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.34□□□□□ -2.46
Col2a1P28481 Mir876-201ENSMUST00000104659 81 ntBASIC-0.35□□□□□ -2.46
Col2a1P28481 Gm25847-201ENSMUST00000116793 96 ntBASIC-0.35□□□□□ -2.46
Col2a1P28481 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.35□□□□□ -2.46
Col2a1P28481 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.35□□□□□ -2.46
Col2a1P28481 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.35□□□□□ -2.46
Col2a1P28481 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.35□□□□□ -2.46
Col2a1P28481 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.35□□□□□ -2.46
Col2a1P28481 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.35□□□□□ -2.47
Col2a1P28481 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.35□□□□□ -2.47
Col2a1P28481 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.35□□□□□ -2.47
Col2a1P28481 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.36□□□□□ -2.47
Col2a1P28481 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.36□□□□□ -2.47
Col2a1P28481 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.36□□□□□ -2.47
Col2a1P28481 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.37□□□□□ -2.47
Col2a1P28481 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.38□□□□□ -2.47
Col2a1P28481 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.38□□□□□ -2.47
Col2a1P28481 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.39□□□□□ -2.47
Col2a1P28481 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.39□□□□□ -2.47
Col2a1P28481 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.39□□□□□ -2.47
Col2a1P28481 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.39□□□□□ -2.47
Col2a1P28481 Mir183-201ENSMUST00000083685 70 ntBASIC-0.39□□□□□ -2.47
Col2a1P28481 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.4□□□□□ -2.47
Col2a1P28481 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.41□□□□□ -2.47
Col2a1P28481 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.41□□□□□ -2.47
Col2a1P28481 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.41□□□□□ -2.48
Col2a1P28481 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col2a1P28481 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.42□□□□□ -2.48
Col2a1P28481 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.42□□□□□ -2.48
Col2a1P28481 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.42□□□□□ -2.48
Col2a1P28481 Mir466l-201ENSMUST00000104866 121 ntBASIC-0.43□□□□□ -2.48
Col2a1P28481 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.43□□□□□ -2.48
Col2a1P28481 Gm24331-201ENSMUST00000175099 67 ntBASIC-0.43□□□□□ -2.48
Col2a1P28481 Gm23801-201ENSMUST00000175561 67 ntBASIC-0.43□□□□□ -2.48
Col2a1P28481 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.43□□□□□ -2.48
Col2a1P28481 Gm24485-201ENSMUST00000178283 67 ntBASIC-0.43□□□□□ -2.48
Col2a1P28481 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.45□□□□□ -2.48
Col2a1P28481 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.45□□□□□ -2.48
Col2a1P28481 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.46□□□□□ -2.48
Col2a1P28481 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.46□□□□□ -2.48
Col2a1P28481 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.46□□□□□ -2.48
Col2a1P28481 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.46□□□□□ -2.48
Col2a1P28481 Gm23293-201ENSMUST00000082552 104 ntBASIC-0.47□□□□□ -2.48
Col2a1P28481 Mir702-201ENSMUST00000102285 109 ntBASIC-0.48□□□□□ -2.49
Col2a1P28481 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.48□□□□□ -2.49
Col2a1P28481 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.48□□□□□ -2.49
Col2a1P28481 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.48□□□□□ -2.49
Col2a1P28481 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.49□□□□□ -2.49
Col2a1P28481 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.49□□□□□ -2.49
Col2a1P28481 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.5□□□□□ -2.49
Col2a1P28481 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.5□□□□□ -2.49
Col2a1P28481 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.5□□□□□ -2.49
Col2a1P28481 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.5□□□□□ -2.49
Col2a1P28481 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.5□□□□□ -2.49
Col2a1P28481 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
Col2a1P28481 Mir677-202ENSMUST00000197076 78 ntBASIC-0.51□□□□□ -2.49
Col2a1P28481 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.52□□□□□ -2.49
Col2a1P28481 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.52□□□□□ -2.49
Col2a1P28481 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.52□□□□□ -2.49
Col2a1P28481 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.52□□□□□ -2.49
Col2a1P28481 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.52□□□□□ -2.49
Col2a1P28481 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
Col2a1P28481 Gm23785-201ENSMUST00000116741 96 ntBASIC-0.53□□□□□ -2.49
Col2a1P28481 Gm22095-201ENSMUST00000158984 150 ntBASIC-0.53□□□□□ -2.49
Col2a1P28481 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.53□□□□□ -2.49
Col2a1P28481 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
Col2a1P28481 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.53□□□□□ -2.49
Col2a1P28481 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.53□□□□□ -2.49
Col2a1P28481 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm11966-201ENSMUST00000119907 87 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm26257-201ENSMUST00000122500 107 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm26485-201ENSMUST00000158019 64 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm22965-201ENSMUST00000157958 101 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.54□□□□□ -2.5
Col2a1P28481 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.55□□□□□ -2.5
Col2a1P28481 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.55□□□□□ -2.5
Col2a1P28481 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.55□□□□□ -2.5
Col2a1P28481 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0.55□□□□□ -2.5
Col2a1P28481 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.55□□□□□ -2.5
Col2a1P28481 Snord57-201ENSMUST00000083338 72 ntBASIC-0.55□□□□□ -2.5
Col2a1P28481 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.55□□□□□ -2.5
Col2a1P28481 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 149.1 ms