Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.01□□□□□ -2.57
Cdx1P18111 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.01□□□□□ -2.57
Cdx1P18111 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.01□□□□□ -2.57
Cdx1P18111 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.02□□□□□ -2.57
Cdx1P18111 Snord123-201ENSMUST00000158692 71 ntBASIC-1.02□□□□□ -2.57
Cdx1P18111 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.02□□□□□ -2.57
Cdx1P18111 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.02□□□□□ -2.57
Cdx1P18111 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.03□□□□□ -2.57
Cdx1P18111 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.03□□□□□ -2.57
Cdx1P18111 Mir543-201ENSMUST00000102286 76 ntBASIC-1.04□□□□□ -2.58
Cdx1P18111 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.04□□□□□ -2.58
Cdx1P18111 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.04□□□□□ -2.58
Cdx1P18111 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.04□□□□□ -2.58
Cdx1P18111 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.04□□□□□ -2.58
Cdx1P18111 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-1.05□□□□□ -2.58
Cdx1P18111 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.05□□□□□ -2.58
Cdx1P18111 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.05□□□□□ -2.58
Cdx1P18111 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.05□□□□□ -2.58
Cdx1P18111 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
Cdx1P18111 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.06□□□□□ -2.58
Cdx1P18111 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.06□□□□□ -2.58
Cdx1P18111 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Cdx1P18111 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.07□□□□□ -2.58
Cdx1P18111 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.07□□□□□ -2.58
Cdx1P18111 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.07□□□□□ -2.58
Cdx1P18111 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.07□□□□□ -2.58
Cdx1P18111 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.07□□□□□ -2.58
Cdx1P18111 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.07□□□□□ -2.58
Cdx1P18111 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.07□□□□□ -2.58
Cdx1P18111 Mir876-201ENSMUST00000104659 81 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 Gm20734-201ENSMUST00000216939 193 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.08□□□□□ -2.58
Cdx1P18111 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.09□□□□□ -2.58
Cdx1P18111 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.09□□□□□ -2.58
Cdx1P18111 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.09□□□□□ -2.58
Cdx1P18111 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.1□□□□□ -2.59
Cdx1P18111 Snord57-201ENSMUST00000083338 72 ntBASIC-1.1□□□□□ -2.59
Cdx1P18111 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.11□□□□□ -2.59
Cdx1P18111 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.11□□□□□ -2.59
Cdx1P18111 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.12□□□□□ -2.59
Cdx1P18111 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.12□□□□□ -2.59
Cdx1P18111 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.12□□□□□ -2.59
Cdx1P18111 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.13□□□□□ -2.59
Cdx1P18111 Gm23678-201ENSMUST00000083157 107 ntBASIC-1.13□□□□□ -2.59
Cdx1P18111 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.13□□□□□ -2.59
Cdx1P18111 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.14□□□□□ -2.59
Cdx1P18111 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.14□□□□□ -2.59
Cdx1P18111 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.14□□□□□ -2.59
Cdx1P18111 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.14□□□□□ -2.59
Cdx1P18111 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.15□□□□□ -2.59
Cdx1P18111 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.15□□□□□ -2.59
Cdx1P18111 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.15□□□□□ -2.59
Cdx1P18111 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.15□□□□□ -2.59
Cdx1P18111 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
Cdx1P18111 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.16□□□□□ -2.6
Cdx1P18111 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-1.16□□□□□ -2.6
Cdx1P18111 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.16□□□□□ -2.6
Cdx1P18111 Mir494-201ENSMUST00000093632 85 ntBASIC-1.16□□□□□ -2.6
Cdx1P18111 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.17□□□□□ -2.6
Cdx1P18111 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.18□□□□□ -2.6
Cdx1P18111 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.19□□□□□ -2.6
Cdx1P18111 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.19□□□□□ -2.6
Cdx1P18111 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.19□□□□□ -2.6
Cdx1P18111 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.2□□□□□ -2.6
Cdx1P18111 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.21□□□□□ -2.6
Cdx1P18111 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.21□□□□□ -2.6
Cdx1P18111 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.21□□□□□ -2.6
Cdx1P18111 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.21□□□□□ -2.6
Cdx1P18111 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.22□□□□□ -2.6
Cdx1P18111 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.23□□□□□ -2.61
Cdx1P18111 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.23□□□□□ -2.61
Cdx1P18111 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.23□□□□□ -2.61
Cdx1P18111 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.24□□□□□ -2.61
Cdx1P18111 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.24□□□□□ -2.61
Cdx1P18111 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.24□□□□□ -2.61
Cdx1P18111 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.24□□□□□ -2.61
Cdx1P18111 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.24□□□□□ -2.61
Cdx1P18111 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.25□□□□□ -2.61
Cdx1P18111 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.25□□□□□ -2.61
Cdx1P18111 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.26□□□□□ -2.61
Cdx1P18111 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.26□□□□□ -2.61
Cdx1P18111 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms