Protein–RNA interactions for Protein: P17095
Hmga1, High mobility group protein HMG-I/HMG-Y, mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Hmga1 | P17095 | Mir669a-5-201 | ENSMUST00000197439 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-10-201 | ENSMUST00000197745 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-11-201 | ENSMUST00000197952 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-4-201 | ENSMUST00000198665 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-9-201 | ENSMUST00000200087 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-8-201 | ENSMUST00000200268 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Gm42844-201 | ENSMUST00000200355 | 112 nt | BASIC | -5,03 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Gm14838-201 | ENSMUST00000118913 | 248 nt | BASIC | -5,05 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm22242-201 | ENSMUST00000175224 | 118 nt | BASIC | -5,05 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Mir181a-1-201 | ENSMUST00000083631 | 87 nt | BASIC | -5,05 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm25425-201 | ENSMUST00000157611 | 96 nt | BASIC | -5,06 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm27317-201 | ENSMUST00000183533 | 95 nt | BASIC | -5,07 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm28489-201 | ENSMUST00000186655 | 316 nt | BASIC | -5,07 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm22558-201 | ENSMUST00000157326 | 95 nt | BASIC | -5,08 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm23345-201 | ENSMUST00000083817 | 150 nt | BASIC | -5,08 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm22057-201 | ENSMUST00000083387 | 107 nt | BASIC | -5,09 | □□□□□ -3,22 | | |
Hmga1 | P17095 | Gm21836-201 | ENSMUST00000178787 | 63 nt | APPRIS P1 BASIC | -5,1 | □□□□□ -3,23 | | |
Hmga1 | P17095 | Gm27465-201 | ENSMUST00000184290 | 91 nt | BASIC | -5,11 | □□□□□ -3,23 | | |
Hmga1 | P17095 | Gm26425-201 | ENSMUST00000122529 | 82 nt | BASIC | -5,12 | □□□□□ -3,23 | | |
Hmga1 | P17095 | Gm26499-201 | ENSMUST00000178544 | 79 nt | BASIC | -5,12 | □□□□□ -3,23 | | |
Hmga1 | P17095 | Gm26096-201 | ENSMUST00000179084 | 79 nt | BASIC | -5,12 | □□□□□ -3,23 | | |
Hmga1 | P17095 | Gm13339-201 | ENSMUST00000120651 | 510 nt | BASIC | -5,13 | □□□□□ -3,23 | | |
Hmga1 | P17095 | AC151902.2-201 | ENSMUST00000226419 | 301 nt | BASIC | -5,15 | □□□□□ -3,23 | | |
Hmga1 | P17095 | Gm26204-201 | ENSMUST00000082906 | 107 nt | BASIC | -5,15 | □□□□□ -3,23 | | |
Hmga1 | P17095 | Gm22605-201 | ENSMUST00000158289 | 108 nt | BASIC | -5,17 | □□□□□ -3,24 | | |
Hmga1 | P17095 | Gm25362-201 | ENSMUST00000158854 | 105 nt | BASIC | -5,17 | □□□□□ -3,24 | | |
Hmga1 | P17095 | Gm27671-201 | ENSMUST00000183739 | 66 nt | BASIC | -5,17 | □□□□□ -3,24 | | |
Hmga1 | P17095 | Gm22677-201 | ENSMUST00000116977 | 108 nt | BASIC | -5,2 | □□□□□ -3,24 | | |
Hmga1 | P17095 | Gm24297-201 | ENSMUST00000158300 | 68 nt | BASIC | -5,2 | □□□□□ -3,24 | | |
Hmga1 | P17095 | Gm24225-201 | ENSMUST00000158825 | 98 nt | BASIC | -5,21 | □□□□□ -3,24 | | |
Hmga1 | P17095 | Gm24131-201 | ENSMUST00000158539 | 107 nt | BASIC | -5,23 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Mir466b-1-201 | ENSMUST00000177988 | 82 nt | BASIC | -5,23 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm25798-201 | ENSMUST00000082641 | 107 nt | BASIC | -5,23 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm22965-201 | ENSMUST00000157958 | 101 nt | BASIC | -5,24 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm24637-201 | ENSMUST00000158674 | 85 nt | BASIC | -5,24 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm22555-201 | ENSMUST00000157801 | 62 nt | BASIC | -5,25 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm24498-201 | ENSMUST00000158445 | 102 nt | BASIC | -5,25 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm27975-201 | ENSMUST00000184400 | 101 nt | BASIC | -5,25 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm22681-201 | ENSMUST00000083853 | 106 nt | BASIC | -5,25 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm22973-201 | ENSMUST00000083298 | 191 nt | BASIC | -5,26 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm23787-201 | ENSMUST00000122538 | 73 nt | BASIC | -5,28 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm22989-201 | ENSMUST00000158313 | 86 nt | BASIC | -5,28 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Igkv13-78-1-201 | ENSMUST00000199298 | 200 nt | BASIC | -5,28 | □□□□□ -3,25 | | |
Hmga1 | P17095 | Gm45492-201 | ENSMUST00000211611 | 288 nt | BASIC | -5,28 | □□□□□ -3,25 | | |
Hmga1 | P17095 | n-R5s214-201 | ENSMUST00000122494 | 121 nt | BASIC | -5,29 | □□□□□ -3,26 | | |
Hmga1 | P17095 | Gm24099-201 | ENSMUST00000083384 | 107 nt | BASIC | -5,29 | □□□□□ -3,26 | | |
Hmga1 | P17095 | Gm26727-201 | ENSMUST00000180773 | 366 nt | APPRIS P1 BASIC | -5,3 | □□□□□ -3,26 | | |
Hmga1 | P17095 | Gm22925-201 | ENSMUST00000174956 | 102 nt | BASIC | -5,32 | □□□□□ -3,26 | | |
Hmga1 | P17095 | Gm24035-201 | ENSMUST00000082867 | 107 nt | BASIC | -5,32 | □□□□□ -3,26 | | |
Hmga1 | P17095 | Mir297-1-201 | ENSMUST00000103800 | 76 nt | BASIC | -5,34 | □□□□□ -3,26 | | |
Hmga1 | P17095 | AC238676.2-201 | ENSMUST00000220910 | 94 nt | BASIC | -5,35 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm22070-201 | ENSMUST00000178475 | 107 nt | BASIC | -5,36 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm24723-201 | ENSMUST00000158233 | 132 nt | BASIC | -5,38 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm24259-201 | ENSMUST00000083740 | 107 nt | BASIC | -5,38 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm6020-201 | ENSMUST00000092094 | 66 nt | APPRIS P1 BASIC | -5,38 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm22770-201 | ENSMUST00000158368 | 67 nt | BASIC | -5,39 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm22775-201 | ENSMUST00000177630 | 120 nt | BASIC | -5,4 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm23569-201 | ENSMUST00000180120 | 120 nt | BASIC | -5,4 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm22879-201 | ENSMUST00000082895 | 74 nt | BASIC | -5,4 | □□□□□ -3,27 | | |
Hmga1 | P17095 | Gm23059-201 | ENSMUST00000158978 | 107 nt | BASIC | -5,41 | □□□□□ -3,28 | | |
Hmga1 | P17095 | Gm44373-201 | ENSMUST00000196112 | 169 nt | BASIC | -5,41 | □□□□□ -3,28 | | |
Hmga1 | P17095 | Gm11333-201 | ENSMUST00000119479 | 148 nt | BASIC | -5,44 | □□□□□ -3,28 | | |
Hmga1 | P17095 | Gm25599-201 | ENSMUST00000157816 | 103 nt | BASIC | -5,45 | □□□□□ -3,28 | | |
Hmga1 | P17095 | CT571266.1-201 | ENSMUST00000222859 | 153 nt | BASIC | -5,46 | □□□□□ -3,28 | | |
Hmga1 | P17095 | Gm11077-201 | ENSMUST00000111844 | 84 nt | APPRIS P1 TSL 5 BASIC | -5,47 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Gm23651-201 | ENSMUST00000116755 | 120 nt | BASIC | -5,47 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Gm38298-201 | ENSMUST00000193578 | 118 nt | BASIC | -5,48 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Gm22056-201 | ENSMUST00000083386 | 81 nt | BASIC | -5,5 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Mir471-201 | ENSMUST00000093596 | 67 nt | BASIC | -5,5 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Gm24996-201 | ENSMUST00000158390 | 99 nt | BASIC | -5,51 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Gm24797-201 | ENSMUST00000178103 | 107 nt | BASIC | -5,52 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Svbp-204 | ENSMUST00000210595 | 150 nt | TSL 5 BASIC | -5,52 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Gm23209-201 | ENSMUST00000158667 | 110 nt | BASIC | -5,53 | □□□□□ -3,29 | | |
Hmga1 | P17095 | Traj34-201 | ENSMUST00000103707 | 58 nt | APPRIS P1 BASIC | -5,54 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Gm26052-201 | ENSMUST00000104646 | 84 nt | BASIC | -5,54 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Gm26306-201 | ENSMUST00000157773 | 119 nt | BASIC | -5,54 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Gm26441-201 | ENSMUST00000082590 | 104 nt | BASIC | -5,54 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Gm25648-201 | ENSMUST00000177844 | 79 nt | BASIC | -5,56 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Mir466e-201 | ENSMUST00000198862 | 84 nt | BASIC | -5,56 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Mir466c-1-201 | ENSMUST00000200654 | 84 nt | BASIC | -5,56 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Gm43505-201 | ENSMUST00000200579 | 139 nt | BASIC | -5,58 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Gm28211-201 | ENSMUST00000190920 | 315 nt | BASIC | -5,59 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Snord58b-201 | ENSMUST00000082937 | 66 nt | BASIC | -5,59 | □□□□□ -3,3 | | |
Hmga1 | P17095 | Gm24651-201 | ENSMUST00000157107 | 107 nt | BASIC | -5,6 | □□□□□ -3,31 | | |
Hmga1 | P17095 | Gm22101-201 | ENSMUST00000157928 | 103 nt | BASIC | -5,6 | □□□□□ -3,31 | | |
Hmga1 | P17095 | Mir3064-201 | ENSMUST00000175532 | 67 nt | BASIC | -5,61 | □□□□□ -3,31 | | |
Hmga1 | P17095 | Mir125b-1-201 | ENSMUST00000175613 | 77 nt | BASIC | -5,61 | □□□□□ -3,31 | | |
Hmga1 | P17095 | mt-Tt-201 | ENSMUST00000082422 | 67 nt | BASIC | -5,61 | □□□□□ -3,31 | | |
Hmga1 | P17095 | Gm23990-201 | ENSMUST00000117031 | 117 nt | BASIC | -5,62 | □□□□□ -3,31 | | |
Hmga1 | P17095 | Gm26257-201 | ENSMUST00000122500 | 107 nt | BASIC | -5,63 | □□□□□ -3,31 | | |
Hmga1 | P17095 | Mir1955-201 | ENSMUST00000158014 | 98 nt | BASIC | -5,63 | □□□□□ -3,31 | | |
Hmga1 | P17095 | Gm25542-201 | ENSMUST00000116889 | 94 nt | BASIC | -5,67 | □□□□□ -3,32 | | |
Hmga1 | P17095 | Gm24387-201 | ENSMUST00000104625 | 90 nt | BASIC | -5,7 | □□□□□ -3,32 | | |
Hmga1 | P17095 | Gm22349-201 | ENSMUST00000157864 | 107 nt | BASIC | -5,7 | □□□□□ -3,32 | | |
Hmga1 | P17095 | Gm22260-201 | ENSMUST00000178643 | 107 nt | BASIC | -5,7 | □□□□□ -3,32 | | |
Hmga1 | P17095 | Gm27694-201 | ENSMUST00000184740 | 86 nt | BASIC | -5,7 | □□□□□ -3,32 | | |
Hmga1 | P17095 | Gm11111-201 | ENSMUST00000112956 | 99 nt | APPRIS P1 TSL 5 BASIC | -5,73 | □□□□□ -3,33 | | |
Hmga1 | P17095 | Gm23468-201 | ENSMUST00000157125 | 108 nt | BASIC | -5,73 | □□□□□ -3,33 | | |
Hmga1 | P17095 | Gm22080-201 | ENSMUST00000157591 | 106 nt | BASIC | -5,73 | □□□□□ -3,33 | | |
Hmga1 | P17095 | Gm25482-201 | ENSMUST00000083225 | 107 nt | BASIC | -5,73 | □□□□□ -3,33 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 129,1 ms