Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.64□□□□□ -2.67
Col1a1P11087 Gm25599-201ENSMUST00000157816 103 ntBASIC-1.65□□□□□ -2.67
Col1a1P11087 Gm27694-201ENSMUST00000184740 86 ntBASIC-1.65□□□□□ -2.67
Col1a1P11087 Mir876-201ENSMUST00000104659 81 ntBASIC-1.66□□□□□ -2.68
Col1a1P11087 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.66□□□□□ -2.68
Col1a1P11087 Gm23651-201ENSMUST00000116755 120 ntBASIC-1.67□□□□□ -2.68
Col1a1P11087 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.67□□□□□ -2.68
Col1a1P11087 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.67□□□□□ -2.68
Col1a1P11087 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.68□□□□□ -2.68
Col1a1P11087 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.68□□□□□ -2.68
Col1a1P11087 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.68□□□□□ -2.68
Col1a1P11087 Gm22555-201ENSMUST00000157801 62 ntBASIC-1.68□□□□□ -2.68
Col1a1P11087 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.68□□□□□ -2.68
Col1a1P11087 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.68□□□□□ -2.68
Col1a1P11087 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm23990-201ENSMUST00000117031 117 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm22989-201ENSMUST00000158313 86 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm38298-201ENSMUST00000193578 118 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.69□□□□□ -2.68
Col1a1P11087 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.7□□□□□ -2.68
Col1a1P11087 Gm26253-201ENSMUST00000122493 103 ntBASIC-1.7□□□□□ -2.68
Col1a1P11087 Gm22349-201ENSMUST00000157864 107 ntBASIC-1.7□□□□□ -2.68
Col1a1P11087 Gm25362-201ENSMUST00000158854 105 ntBASIC-1.7□□□□□ -2.68
Col1a1P11087 Gm26159-201ENSMUST00000158968 104 ntBASIC-1.7□□□□□ -2.68
Col1a1P11087 Gm44373-201ENSMUST00000196112 169 ntBASIC-1.7□□□□□ -2.68
Col1a1P11087 mt-Tv-201ENSMUST00000082389 69 ntBASIC-1.7□□□□□ -2.68
Col1a1P11087 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
Col1a1P11087 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Gm22080-201ENSMUST00000157591 106 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Gm26194-201ENSMUST00000175036 71 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Mir466e-201ENSMUST00000198862 84 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Gm24099-201ENSMUST00000083384 107 ntBASIC-1.71□□□□□ -2.68
Col1a1P11087 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
Col1a1P11087 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Gm44481-201ENSMUST00000197288 84 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Gm25482-201ENSMUST00000083225 107 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Mir154-201ENSMUST00000083514 66 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-1.73□□□□□ -2.69
Col1a1P11087 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
Col1a1P11087 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.74□□□□□ -2.69
Col1a1P11087 Gm22070-201ENSMUST00000178475 107 ntBASIC-1.74□□□□□ -2.69
Col1a1P11087 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.75□□□□□ -2.69
Col1a1P11087 Mir471-201ENSMUST00000093596 67 ntBASIC-1.75□□□□□ -2.69
Col1a1P11087 Gm27882-201ENSMUST00000184904 74 ntBASIC-1.75□□□□□ -2.69
Col1a1P11087 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.76□□□□□ -2.69
Col1a1P11087 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-1.76□□□□□ -2.69
Col1a1P11087 Gm25812-201ENSMUST00000082751 103 ntBASIC-1.76□□□□□ -2.69
Col1a1P11087 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.76□□□□□ -2.69
Col1a1P11087 Gm25414-201ENSMUST00000101814 107 ntBASIC-1.77□□□□□ -2.69
Col1a1P11087 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.77□□□□□ -2.69
Col1a1P11087 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.78□□□□□ -2.69
Col1a1P11087 mt-Tt-201ENSMUST00000082422 67 ntBASIC-1.78□□□□□ -2.69
Col1a1P11087 Gm24211-201ENSMUST00000158264 107 ntBASIC-1.79□□□□□ -2.7
Col1a1P11087 AC108945.1-201ENSMUST00000226477 94 ntBASIC-1.79□□□□□ -2.7
Col1a1P11087 Gm27845-201ENSMUST00000184479 114 ntBASIC-1.8□□□□□ -2.7
Col1a1P11087 Gm24106-201ENSMUST00000175498 127 ntBASIC-1.81□□□□□ -2.7
Col1a1P11087 Gm29107-201ENSMUST00000190910 347 ntBASIC-1.81□□□□□ -2.7
Col1a1P11087 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.81□□□□□ -2.7
Col1a1P11087 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.81□□□□□ -2.7
Col1a1P11087 Gm23790-201ENSMUST00000083013 107 ntBASIC-1.81□□□□□ -2.7
Col1a1P11087 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.82□□□□□ -2.7
Col1a1P11087 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.82□□□□□ -2.7
Col1a1P11087 Gm22101-201ENSMUST00000157928 103 ntBASIC-1.82□□□□□ -2.7
Col1a1P11087 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.82□□□□□ -2.7
Col1a1P11087 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.83□□□□□ -2.7
Col1a1P11087 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.83□□□□□ -2.7
Col1a1P11087 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.83□□□□□ -2.7
Col1a1P11087 CT010505.1-201ENSMUST00000227026 396 ntBASIC-1.83□□□□□ -2.7
Col1a1P11087 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.84□□□□□ -2.7
Col1a1P11087 Gm23258-201ENSMUST00000158319 106 ntBASIC-1.84□□□□□ -2.7
Col1a1P11087 Gm28211-201ENSMUST00000190920 315 ntBASIC-1.84□□□□□ -2.7
Col1a1P11087 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-1.85□□□□□ -2.71
Col1a1P11087 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-1.85□□□□□ -2.71
Col1a1P11087 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.85□□□□□ -2.71
Col1a1P11087 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.85□□□□□ -2.71
Col1a1P11087 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.85□□□□□ -2.71
Col1a1P11087 Gm22836-201ENSMUST00000158441 61 ntBASIC-1.85□□□□□ -2.71
Col1a1P11087 Gm24916-201ENSMUST00000157287 79 ntBASIC-1.86□□□□□ -2.71
Col1a1P11087 Mir664-201ENSMUST00000196796 69 ntBASIC-1.86□□□□□ -2.71
Col1a1P11087 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.87□□□□□ -2.71
Col1a1P11087 Gm22490-201ENSMUST00000157188 119 ntBASIC-1.87□□□□□ -2.71
Col1a1P11087 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.87□□□□□ -2.71
Col1a1P11087 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.87□□□□□ -2.71
Col1a1P11087 AC164561.1-201ENSMUST00000220414 115 ntBASIC-1.87□□□□□ -2.71
Col1a1P11087 Gm38280-201ENSMUST00000192610 158 ntBASIC-1.88□□□□□ -2.71
Col1a1P11087 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.89□□□□□ -2.71
Col1a1P11087 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms