Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm23814-201ENSMUST00000083230 102 ntBASIC0.67□□□□□ -2.3
Trim39Q9ESN2 Gm25326-201ENSMUST00000101903 107 ntBASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Gm24579-201ENSMUST00000103964 144 ntBASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Snord71-201ENSMUST00000104361 85 ntBASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Gm24379-201ENSMUST00000122695 86 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Gm37750-201ENSMUST00000193563 129 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Mir3065-201ENSMUST00000198674 87 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Gm23969-201ENSMUST00000083324 74 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Gm25170-201ENSMUST00000104191 129 ntBASIC0.63□□□□□ -2.31
Trim39Q9ESN2 Gm23180-201ENSMUST00000158686 125 ntBASIC0.63□□□□□ -2.31
Trim39Q9ESN2 Gm22474-201ENSMUST00000179407 107 ntBASIC0.63□□□□□ -2.31
Trim39Q9ESN2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.62□□□□□ -2.31
Trim39Q9ESN2 Gm25522-201ENSMUST00000158394 105 ntBASIC0.62□□□□□ -2.31
Trim39Q9ESN2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Gm24555-201ENSMUST00000104548 124 ntBASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Gm23340-201ENSMUST00000158955 123 ntBASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Mir3109-201ENSMUST00000175301 88 ntBASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Gm25274-201ENSMUST00000104296 135 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm23955-201ENSMUST00000157214 100 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm23630-201ENSMUST00000175292 104 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm22565-201ENSMUST00000175540 69 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm24508-201ENSMUST00000180104 107 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm22746-201ENSMUST00000082494 107 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Mir216a-201ENSMUST00000083605 72 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.59□□□□□ -2.31
Trim39Q9ESN2 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.58□□□□□ -2.32
Trim39Q9ESN2 Gm23060-201ENSMUST00000102345 109 ntBASIC0.57□□□□□ -2.32
Trim39Q9ESN2 Mir224-201ENSMUST00000083608 82 ntBASIC0.57□□□□□ -2.32
Trim39Q9ESN2 Gm23573-201ENSMUST00000104408 107 ntBASIC0.56□□□□□ -2.32
Trim39Q9ESN2 Mir8116-201ENSMUST00000184134 97 ntBASIC0.56□□□□□ -2.32
Trim39Q9ESN2 Mir6394-201ENSMUST00000184738 99 ntBASIC0.55□□□□□ -2.32
Trim39Q9ESN2 Gm23173-201ENSMUST00000157161 160 ntBASIC0.54□□□□□ -2.32
Trim39Q9ESN2 Mir200b-201ENSMUST00000083615 70 ntBASIC0.54□□□□□ -2.32
Trim39Q9ESN2 Mir344-201ENSMUST00000083634 95 ntBASIC0.53□□□□□ -2.32
Trim39Q9ESN2 Gm26236-201ENSMUST00000175536 137 ntBASIC0.52□□□□□ -2.33
Trim39Q9ESN2 AC160976.1-201ENSMUST00000215092 148 ntBASIC0.52□□□□□ -2.33
Trim39Q9ESN2 Gm22302-201ENSMUST00000082657 106 ntBASIC0.51□□□□□ -2.33
Trim39Q9ESN2 Gm22838-201ENSMUST00000158437 99 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Mir6985-201ENSMUST00000184641 61 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Gm44458-201ENSMUST00000196594 143 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Gm42506-201ENSMUST00000202009 150 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Gm24342-201ENSMUST00000103907 104 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Gm24323-201ENSMUST00000175342 77 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Gm28001-201ENSMUST00000183561 117 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Gm45617-201ENSMUST00000211132 209 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Mir10b-201ENSMUST00000083566 68 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.48□□□□□ -2.33
Trim39Q9ESN2 Gm25791-201ENSMUST00000083292 137 ntBASIC0.47□□□□□ -2.33
Trim39Q9ESN2 Gm27475-201ENSMUST00000183420 61 ntBASIC0.46□□□□□ -2.34
Trim39Q9ESN2 Gm43432-201ENSMUST00000196352 121 ntBASIC0.46□□□□□ -2.34
Trim39Q9ESN2 Gm23605-201ENSMUST00000157255 127 ntBASIC0.45□□□□□ -2.34
Trim39Q9ESN2 Gm24297-201ENSMUST00000158300 68 ntBASIC0.45□□□□□ -2.34
Trim39Q9ESN2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.44□□□□□ -2.34
Trim39Q9ESN2 Gm22335-201ENSMUST00000157724 99 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm23008-201ENSMUST00000158946 80 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm23159-201ENSMUST00000175088 77 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm24710-201ENSMUST00000175235 101 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm24135-201ENSMUST00000179085 101 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm27798-201ENSMUST00000184989 71 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm38208-201ENSMUST00000192476 114 ntBASIC0.41□□□□□ -2.34
Trim39Q9ESN2 Gm22357-201ENSMUST00000082882 83 ntBASIC0.41□□□□□ -2.34
Trim39Q9ESN2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Gm26052-201ENSMUST00000104646 84 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Gm13577-201ENSMUST00000121365 205 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Mir142b-201ENSMUST00000083486 115 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Gm37832-201ENSMUST00000118935 189 ntBASIC0.39□□□□□ -2.35
Trim39Q9ESN2 Gm24833-201ENSMUST00000116775 120 ntBASIC0.38□□□□□ -2.35
Trim39Q9ESN2 Gm27749-201ENSMUST00000183651 125 ntBASIC0.38□□□□□ -2.35
Trim39Q9ESN2 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm22157-201ENSMUST00000158410 104 ntBASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm23821-201ENSMUST00000158738 106 ntBASIC0.37□□□□□ -2.35
Trim39Q9ESN2 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm6607-201ENSMUST00000215035 328 ntBASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Trim39Q9ESN2 Gm23442-201ENSMUST00000082919 134 ntBASIC0.36□□□□□ -2.35
Trim39Q9ESN2 Gm23126-201ENSMUST00000104260 134 ntBASIC0.35□□□□□ -2.35
Trim39Q9ESN2 Gm24843-201ENSMUST00000158682 76 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Gm26285-201ENSMUST00000177923 107 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Mir3967-201ENSMUST00000198710 68 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Gm23622-201ENSMUST00000082460 107 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Gm24377-201ENSMUST00000104398 131 ntBASIC0.33□□□□□ -2.36
Trim39Q9ESN2 Gm23961-201ENSMUST00000104685 97 ntBASIC0.33□□□□□ -2.36
Trim39Q9ESN2 Mir7651-201ENSMUST00000184154 64 ntBASIC0.33□□□□□ -2.36
Trim39Q9ESN2 Gm25222-201ENSMUST00000158199 126 ntBASIC0.32□□□□□ -2.36
Trim39Q9ESN2 Mir8107-201ENSMUST00000184024 117 ntBASIC0.32□□□□□ -2.36
Trim39Q9ESN2 Gm23321-201ENSMUST00000104465 126 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Mir7079-201ENSMUST00000184697 69 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Mir327-201ENSMUST00000199328 69 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Gm44328-201ENSMUST00000199331 75 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Gm23240-201ENSMUST00000083009 121 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Gm25779-201ENSMUST00000116710 95 ntBASIC0.28□□□□□ -2.36
Trim39Q9ESN2 Gm44828-201ENSMUST00000203745 106 ntBASIC0.28□□□□□ -2.36
Trim39Q9ESN2 Gm25510-201ENSMUST00000116986 123 ntBASIC0.27□□□□□ -2.37
Trim39Q9ESN2 Gm26152-201ENSMUST00000157427 101 ntBASIC0.27□□□□□ -2.37
Trim39Q9ESN2 Gm25787-201ENSMUST00000104709 92 ntBASIC0.26□□□□□ -2.37
Trim39Q9ESN2 Gm22431-201ENSMUST00000158545 107 ntBASIC0.25□□□□□ -2.37
Trim39Q9ESN2 Gm27784-201ENSMUST00000184926 113 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 432.5 ms