Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm23814-201ENSMUST00000083230 102 ntBASIC0.67□□□□□ -2.3
Trim39Q9ESN2 Gm25326-201ENSMUST00000101903 107 ntBASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Gm24579-201ENSMUST00000103964 144 ntBASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Snord71-201ENSMUST00000104361 85 ntBASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trim39Q9ESN2 Gm24379-201ENSMUST00000122695 86 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Gm37750-201ENSMUST00000193563 129 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Mir3065-201ENSMUST00000198674 87 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Gm23969-201ENSMUST00000083324 74 ntBASIC0.64□□□□□ -2.31
Trim39Q9ESN2 Gm25170-201ENSMUST00000104191 129 ntBASIC0.63□□□□□ -2.31
Trim39Q9ESN2 Gm23180-201ENSMUST00000158686 125 ntBASIC0.63□□□□□ -2.31
Trim39Q9ESN2 Gm22474-201ENSMUST00000179407 107 ntBASIC0.63□□□□□ -2.31
Trim39Q9ESN2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.62□□□□□ -2.31
Trim39Q9ESN2 Gm25522-201ENSMUST00000158394 105 ntBASIC0.62□□□□□ -2.31
Trim39Q9ESN2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Gm24555-201ENSMUST00000104548 124 ntBASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Gm23340-201ENSMUST00000158955 123 ntBASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Mir3109-201ENSMUST00000175301 88 ntBASIC0.61□□□□□ -2.31
Trim39Q9ESN2 Gm25274-201ENSMUST00000104296 135 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm23955-201ENSMUST00000157214 100 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm23630-201ENSMUST00000175292 104 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm22565-201ENSMUST00000175540 69 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm24508-201ENSMUST00000180104 107 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Gm22746-201ENSMUST00000082494 107 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Mir216a-201ENSMUST00000083605 72 ntBASIC0.6□□□□□ -2.31
Trim39Q9ESN2 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.59□□□□□ -2.31
Trim39Q9ESN2 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.58□□□□□ -2.32
Trim39Q9ESN2 Gm23060-201ENSMUST00000102345 109 ntBASIC0.57□□□□□ -2.32
Trim39Q9ESN2 Mir224-201ENSMUST00000083608 82 ntBASIC0.57□□□□□ -2.32
Trim39Q9ESN2 Gm23573-201ENSMUST00000104408 107 ntBASIC0.56□□□□□ -2.32
Trim39Q9ESN2 Mir8116-201ENSMUST00000184134 97 ntBASIC0.56□□□□□ -2.32
Trim39Q9ESN2 Mir6394-201ENSMUST00000184738 99 ntBASIC0.55□□□□□ -2.32
Trim39Q9ESN2 Gm23173-201ENSMUST00000157161 160 ntBASIC0.54□□□□□ -2.32
Trim39Q9ESN2 Mir200b-201ENSMUST00000083615 70 ntBASIC0.54□□□□□ -2.32
Trim39Q9ESN2 Mir344-201ENSMUST00000083634 95 ntBASIC0.53□□□□□ -2.32
Trim39Q9ESN2 Gm26236-201ENSMUST00000175536 137 ntBASIC0.52□□□□□ -2.33
Trim39Q9ESN2 AC160976.1-201ENSMUST00000215092 148 ntBASIC0.52□□□□□ -2.33
Trim39Q9ESN2 Gm22302-201ENSMUST00000082657 106 ntBASIC0.51□□□□□ -2.33
Trim39Q9ESN2 Gm22838-201ENSMUST00000158437 99 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Mir6985-201ENSMUST00000184641 61 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Gm44458-201ENSMUST00000196594 143 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Gm42506-201ENSMUST00000202009 150 ntBASIC0.5□□□□□ -2.33
Trim39Q9ESN2 Gm24342-201ENSMUST00000103907 104 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Gm24323-201ENSMUST00000175342 77 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Gm28001-201ENSMUST00000183561 117 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Gm45617-201ENSMUST00000211132 209 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Mir10b-201ENSMUST00000083566 68 ntBASIC0.49□□□□□ -2.33
Trim39Q9ESN2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.48□□□□□ -2.33
Trim39Q9ESN2 Gm25791-201ENSMUST00000083292 137 ntBASIC0.47□□□□□ -2.33
Trim39Q9ESN2 Gm27475-201ENSMUST00000183420 61 ntBASIC0.46□□□□□ -2.34
Trim39Q9ESN2 Gm43432-201ENSMUST00000196352 121 ntBASIC0.46□□□□□ -2.34
Trim39Q9ESN2 Gm23605-201ENSMUST00000157255 127 ntBASIC0.45□□□□□ -2.34
Trim39Q9ESN2 Gm24297-201ENSMUST00000158300 68 ntBASIC0.45□□□□□ -2.34
Trim39Q9ESN2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.44□□□□□ -2.34
Trim39Q9ESN2 Gm22335-201ENSMUST00000157724 99 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm23008-201ENSMUST00000158946 80 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm23159-201ENSMUST00000175088 77 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm24710-201ENSMUST00000175235 101 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm24135-201ENSMUST00000179085 101 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm27798-201ENSMUST00000184989 71 ntBASIC0.42□□□□□ -2.34
Trim39Q9ESN2 Gm38208-201ENSMUST00000192476 114 ntBASIC0.41□□□□□ -2.34
Trim39Q9ESN2 Gm22357-201ENSMUST00000082882 83 ntBASIC0.41□□□□□ -2.34
Trim39Q9ESN2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Gm26052-201ENSMUST00000104646 84 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Gm13577-201ENSMUST00000121365 205 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Mir142b-201ENSMUST00000083486 115 ntBASIC0.4□□□□□ -2.35
Trim39Q9ESN2 Gm37832-201ENSMUST00000118935 189 ntBASIC0.39□□□□□ -2.35
Trim39Q9ESN2 Gm24833-201ENSMUST00000116775 120 ntBASIC0.38□□□□□ -2.35
Trim39Q9ESN2 Gm27749-201ENSMUST00000183651 125 ntBASIC0.38□□□□□ -2.35
Trim39Q9ESN2 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm22157-201ENSMUST00000158410 104 ntBASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm23821-201ENSMUST00000158738 106 ntBASIC0.37□□□□□ -2.35
Trim39Q9ESN2 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm6607-201ENSMUST00000215035 328 ntBASIC0.37□□□□□ -2.35
Trim39Q9ESN2 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Trim39Q9ESN2 Gm23442-201ENSMUST00000082919 134 ntBASIC0.36□□□□□ -2.35
Trim39Q9ESN2 Gm23126-201ENSMUST00000104260 134 ntBASIC0.35□□□□□ -2.35
Trim39Q9ESN2 Gm24843-201ENSMUST00000158682 76 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Gm26285-201ENSMUST00000177923 107 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Mir3967-201ENSMUST00000198710 68 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Gm23622-201ENSMUST00000082460 107 ntBASIC0.34□□□□□ -2.36
Trim39Q9ESN2 Gm24377-201ENSMUST00000104398 131 ntBASIC0.33□□□□□ -2.36
Trim39Q9ESN2 Gm23961-201ENSMUST00000104685 97 ntBASIC0.33□□□□□ -2.36
Trim39Q9ESN2 Mir7651-201ENSMUST00000184154 64 ntBASIC0.33□□□□□ -2.36
Trim39Q9ESN2 Gm25222-201ENSMUST00000158199 126 ntBASIC0.32□□□□□ -2.36
Trim39Q9ESN2 Mir8107-201ENSMUST00000184024 117 ntBASIC0.32□□□□□ -2.36
Trim39Q9ESN2 Gm23321-201ENSMUST00000104465 126 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Mir7079-201ENSMUST00000184697 69 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Mir327-201ENSMUST00000199328 69 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Gm44328-201ENSMUST00000199331 75 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Gm23240-201ENSMUST00000083009 121 ntBASIC0.3□□□□□ -2.36
Trim39Q9ESN2 Gm25779-201ENSMUST00000116710 95 ntBASIC0.28□□□□□ -2.36
Trim39Q9ESN2 Gm44828-201ENSMUST00000203745 106 ntBASIC0.28□□□□□ -2.36
Trim39Q9ESN2 Gm25510-201ENSMUST00000116986 123 ntBASIC0.27□□□□□ -2.37
Trim39Q9ESN2 Gm26152-201ENSMUST00000157427 101 ntBASIC0.27□□□□□ -2.37
Trim39Q9ESN2 Gm25787-201ENSMUST00000104709 92 ntBASIC0.26□□□□□ -2.37
Trim39Q9ESN2 Gm22431-201ENSMUST00000158545 107 ntBASIC0.25□□□□□ -2.37
Trim39Q9ESN2 Gm27784-201ENSMUST00000184926 113 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 148 ms