Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir6381-201ENSMUST00000183426 87 ntBASIC1.2□□□□□ -2.22
Trim47Q8C0E3 Mir1904-201ENSMUST00000122702 80 ntBASIC1.18□□□□□ -2.22
Trim47Q8C0E3 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.18□□□□□ -2.22
Trim47Q8C0E3 Snord67-201ENSMUST00000104033 111 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Gm23173-201ENSMUST00000157161 160 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Gm26363-201ENSMUST00000158866 83 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Mir6364-201ENSMUST00000183396 86 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Gm44345-201ENSMUST00000199560 135 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Gm22879-201ENSMUST00000082895 74 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Mir33-201ENSMUST00000083531 69 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Mir22-201ENSMUST00000083595 95 ntBASIC1.17□□□□□ -2.22
Trim47Q8C0E3 Gm24278-201ENSMUST00000104239 127 ntBASIC1.16□□□□□ -2.22
Trim47Q8C0E3 Mir3105-201ENSMUST00000175480 85 ntBASIC1.16□□□□□ -2.22
Trim47Q8C0E3 Gm24020-201ENSMUST00000180156 108 ntBASIC1.16□□□□□ -2.22
Trim47Q8C0E3 Mir7091-201ENSMUST00000184075 79 ntBASIC1.16□□□□□ -2.22
Trim47Q8C0E3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.16□□□□□ -2.22
Trim47Q8C0E3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trim47Q8C0E3 Gm23483-201ENSMUST00000104179 108 ntBASIC1.15□□□□□ -2.23
Trim47Q8C0E3 Mir7229-201ENSMUST00000197062 53 ntBASIC1.15□□□□□ -2.23
Trim47Q8C0E3 Mir1955-201ENSMUST00000158014 98 ntBASIC1.14□□□□□ -2.23
Trim47Q8C0E3 Gm22301-201ENSMUST00000082656 107 ntBASIC1.14□□□□□ -2.23
Trim47Q8C0E3 Gm24459-201ENSMUST00000082730 86 ntBASIC1.14□□□□□ -2.23
Trim47Q8C0E3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trim47Q8C0E3 Gm23893-201ENSMUST00000158106 134 ntBASIC1.13□□□□□ -2.23
Trim47Q8C0E3 Snord32a-201ENSMUST00000083285 83 ntBASIC1.13□□□□□ -2.23
Trim47Q8C0E3 Snord35a-201ENSMUST00000083884 90 ntBASIC1.12□□□□□ -2.23
Trim47Q8C0E3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trim47Q8C0E3 Gm25787-201ENSMUST00000104709 92 ntBASIC1.11□□□□□ -2.23
Trim47Q8C0E3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trim47Q8C0E3 Gm24678-201ENSMUST00000158756 104 ntBASIC1.1□□□□□ -2.23
Trim47Q8C0E3 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1.1□□□□□ -2.23
Trim47Q8C0E3 Gm24777-201ENSMUST00000157644 107 ntBASIC1.09□□□□□ -2.23
Trim47Q8C0E3 Gm26484-201ENSMUST00000158018 106 ntBASIC1.09□□□□□ -2.23
Trim47Q8C0E3 Mir27b-201ENSMUST00000083541 73 ntBASIC1.09□□□□□ -2.23
Trim47Q8C0E3 Gm24884-201ENSMUST00000158784 119 ntBASIC1.07□□□□□ -2.24
Trim47Q8C0E3 AC161271.1-201ENSMUST00000226914 150 ntBASIC1.07□□□□□ -2.24
Trim47Q8C0E3 Gm23008-201ENSMUST00000158946 80 ntBASIC1.06□□□□□ -2.24
Trim47Q8C0E3 Mir363-201ENSMUST00000093598 75 ntBASIC1.06□□□□□ -2.24
Trim47Q8C0E3 Gm25132-201ENSMUST00000082652 107 ntBASIC1.05□□□□□ -2.24
Trim47Q8C0E3 Mir695-201ENSMUST00000102261 109 ntBASIC1.04□□□□□ -2.24
Trim47Q8C0E3 Gm24431-201ENSMUST00000104073 66 ntBASIC1.03□□□□□ -2.24
Trim47Q8C0E3 Gm25161-201ENSMUST00000158913 132 ntBASIC1.03□□□□□ -2.24
Trim47Q8C0E3 Gm27798-201ENSMUST00000184989 71 ntBASIC1.03□□□□□ -2.24
Trim47Q8C0E3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC1.02□□□□□ -2.25
Trim47Q8C0E3 Gm24258-201ENSMUST00000083739 133 ntBASIC1.02□□□□□ -2.25
Trim47Q8C0E3 Gm23783-201ENSMUST00000157941 102 ntBASIC1.01□□□□□ -2.25
Trim47Q8C0E3 Gm44457-201ENSMUST00000198109 76 ntBASIC1.01□□□□□ -2.25
Trim47Q8C0E3 Gm45617-201ENSMUST00000211132 209 ntBASIC1.01□□□□□ -2.25
Trim47Q8C0E3 Gm25408-201ENSMUST00000104104 133 ntBASIC1□□□□□ -2.25
Trim47Q8C0E3 Mir6380-201ENSMUST00000184334 81 ntBASIC1□□□□□ -2.25
Trim47Q8C0E3 Mir219b-201ENSMUST00000198317 65 ntBASIC1□□□□□ -2.25
Trim47Q8C0E3 Gm22593-201ENSMUST00000104245 109 ntBASIC0.99□□□□□ -2.25
Trim47Q8C0E3 Gm24651-201ENSMUST00000157107 107 ntBASIC0.99□□□□□ -2.25
Trim47Q8C0E3 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0.99□□□□□ -2.25
Trim47Q8C0E3 Gm22260-201ENSMUST00000178643 107 ntBASIC0.99□□□□□ -2.25
Trim47Q8C0E3 Mir7079-201ENSMUST00000184697 69 ntBASIC0.99□□□□□ -2.25
Trim47Q8C0E3 Gm44803-201ENSMUST00000204384 156 ntBASIC0.99□□□□□ -2.25
Trim47Q8C0E3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.98□□□□□ -2.25
Trim47Q8C0E3 Gm22550-201ENSMUST00000179774 107 ntBASIC0.98□□□□□ -2.25
Trim47Q8C0E3 Gm27289-201ENSMUST00000183341 82 ntBASIC0.98□□□□□ -2.25
Trim47Q8C0E3 Gm22060-201ENSMUST00000082558 107 ntBASIC0.98□□□□□ -2.25
Trim47Q8C0E3 Gm22981-201ENSMUST00000082611 75 ntBASIC0.98□□□□□ -2.25
Trim47Q8C0E3 Gm25683-201ENSMUST00000083940 131 ntBASIC0.98□□□□□ -2.25
Trim47Q8C0E3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.97□□□□□ -2.25
Trim47Q8C0E3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.97□□□□□ -2.25
Trim47Q8C0E3 Mir7065-201ENSMUST00000185110 61 ntBASIC0.97□□□□□ -2.25
Trim47Q8C0E3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.96□□□□□ -2.26
Trim47Q8C0E3 Mir142b-201ENSMUST00000083486 115 ntBASIC0.96□□□□□ -2.26
Trim47Q8C0E3 Snord33-201ENSMUST00000083694 84 ntBASIC0.96□□□□□ -2.26
Trim47Q8C0E3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.95□□□□□ -2.26
Trim47Q8C0E3 Gm23240-201ENSMUST00000083009 121 ntBASIC0.95□□□□□ -2.26
Trim47Q8C0E3 Mir18-201ENSMUST00000083469 96 ntBASIC0.95□□□□□ -2.26
Trim47Q8C0E3 Gm23126-201ENSMUST00000104260 134 ntBASIC0.94□□□□□ -2.26
Trim47Q8C0E3 Gm22335-201ENSMUST00000157724 99 ntBASIC0.94□□□□□ -2.26
Trim47Q8C0E3 Mir670-201ENSMUST00000102380 100 ntBASIC0.93□□□□□ -2.26
Trim47Q8C0E3 Gm24445-201ENSMUST00000083981 107 ntBASIC0.93□□□□□ -2.26
Trim47Q8C0E3 Mir362-201ENSMUST00000093592 65 ntBASIC0.93□□□□□ -2.26
Trim47Q8C0E3 Gm37832-201ENSMUST00000118935 189 ntBASIC0.91□□□□□ -2.26
Trim47Q8C0E3 Gm37750-201ENSMUST00000193563 129 ntBASIC0.91□□□□□ -2.26
Trim47Q8C0E3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.9□□□□□ -2.27
Trim47Q8C0E3 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC0.9□□□□□ -2.27
Trim47Q8C0E3 Mir3065-201ENSMUST00000198674 87 ntBASIC0.9□□□□□ -2.27
Trim47Q8C0E3 Gm22056-201ENSMUST00000083386 81 ntBASIC0.9□□□□□ -2.27
Trim47Q8C0E3 Gm22157-201ENSMUST00000158410 104 ntBASIC0.89□□□□□ -2.27
Trim47Q8C0E3 Gm22340-201ENSMUST00000157717 114 ntBASIC0.88□□□□□ -2.27
Trim47Q8C0E3 Gm24372-201ENSMUST00000104400 110 ntBASIC0.87□□□□□ -2.27
Trim47Q8C0E3 Gm25158-201ENSMUST00000177681 121 ntBASIC0.87□□□□□ -2.27
Trim47Q8C0E3 Gm26229-201ENSMUST00000179699 121 ntBASIC0.87□□□□□ -2.27
Trim47Q8C0E3 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.87□□□□□ -2.27
Trim47Q8C0E3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.87□□□□□ -2.27
Trim47Q8C0E3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.85□□□□□ -2.27
Trim47Q8C0E3 Gm25903-201ENSMUST00000158492 103 ntBASIC0.85□□□□□ -2.27
Trim47Q8C0E3 Gm26227-201ENSMUST00000082510 101 ntBASIC0.85□□□□□ -2.27
Trim47Q8C0E3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.85□□□□□ -2.27
Trim47Q8C0E3 Mir1948-201ENSMUST00000157325 85 ntBASIC0.84□□□□□ -2.27
Trim47Q8C0E3 Gm23992-201ENSMUST00000174981 67 ntBASIC0.84□□□□□ -2.27
Trim47Q8C0E3 Gm25247-201ENSMUST00000175475 90 ntBASIC0.83□□□□□ -2.28
Trim47Q8C0E3 Mir224-201ENSMUST00000083608 82 ntBASIC0.83□□□□□ -2.28
Trim47Q8C0E3 Mir297b-201ENSMUST00000102268 109 ntBASIC0.82□□□□□ -2.28
Trim47Q8C0E3 Gm20386-201ENSMUST00000174010 132 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms