Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm22455-201ENSMUST00000082580 71 ntBASIC0.63□□□□□ -2.31
Shkbp1Q6P7W2 Gm25275-201ENSMUST00000104297 129 ntBASIC0.62□□□□□ -2.31
Shkbp1Q6P7W2 Gm26236-201ENSMUST00000175536 137 ntBASIC0.62□□□□□ -2.31
Shkbp1Q6P7W2 Gm23017-201ENSMUST00000177583 72 ntBASIC0.62□□□□□ -2.31
Shkbp1Q6P7W2 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.62□□□□□ -2.31
Shkbp1Q6P7W2 Mir216a-201ENSMUST00000083605 72 ntBASIC0.62□□□□□ -2.31
Shkbp1Q6P7W2 Gm26285-201ENSMUST00000177923 107 ntBASIC0.61□□□□□ -2.31
Shkbp1Q6P7W2 Mir6389-201ENSMUST00000183661 102 ntBASIC0.61□□□□□ -2.31
Shkbp1Q6P7W2 Gm23622-201ENSMUST00000082460 107 ntBASIC0.61□□□□□ -2.31
Shkbp1Q6P7W2 Gm23494-201ENSMUST00000116830 126 ntBASIC0.6□□□□□ -2.31
Shkbp1Q6P7W2 Gm23783-201ENSMUST00000157941 102 ntBASIC0.6□□□□□ -2.31
Shkbp1Q6P7W2 Mir7231-201ENSMUST00000196252 61 ntBASIC0.6□□□□□ -2.31
Shkbp1Q6P7W2 Gm44803-201ENSMUST00000204384 156 ntBASIC0.6□□□□□ -2.31
Shkbp1Q6P7W2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.59□□□□□ -2.31
Shkbp1Q6P7W2 Gm22981-201ENSMUST00000082611 75 ntBASIC0.58□□□□□ -2.32
Shkbp1Q6P7W2 Gm25787-201ENSMUST00000104709 92 ntBASIC0.57□□□□□ -2.32
Shkbp1Q6P7W2 Mir3065-201ENSMUST00000198674 87 ntBASIC0.57□□□□□ -2.32
Shkbp1Q6P7W2 Snora62-201ENSMUST00000082991 149 ntBASIC0.57□□□□□ -2.32
Shkbp1Q6P7W2 Snord57-201ENSMUST00000083338 72 ntBASIC0.57□□□□□ -2.32
Shkbp1Q6P7W2 Gm22239-201ENSMUST00000175220 103 ntBASIC0.56□□□□□ -2.32
Shkbp1Q6P7W2 Gm25087-201ENSMUST00000101992 78 ntBASIC0.55□□□□□ -2.32
Shkbp1Q6P7W2 Gm25802-201ENSMUST00000082639 77 ntBASIC0.55□□□□□ -2.32
Shkbp1Q6P7W2 Gm26467-201ENSMUST00000097257 78 ntBASIC0.55□□□□□ -2.32
Shkbp1Q6P7W2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.54□□□□□ -2.32
Shkbp1Q6P7W2 Mir7079-201ENSMUST00000184697 69 ntBASIC0.54□□□□□ -2.32
Shkbp1Q6P7W2 Mir363-201ENSMUST00000093598 75 ntBASIC0.54□□□□□ -2.32
Shkbp1Q6P7W2 Gm24996-201ENSMUST00000158390 99 ntBASIC0.53□□□□□ -2.32
Shkbp1Q6P7W2 Gm22298-201ENSMUST00000082662 133 ntBASIC0.53□□□□□ -2.32
Shkbp1Q6P7W2 Gm23969-201ENSMUST00000083324 74 ntBASIC0.53□□□□□ -2.32
Shkbp1Q6P7W2 Mir18-201ENSMUST00000083469 96 ntBASIC0.53□□□□□ -2.32
Shkbp1Q6P7W2 Gm22016-201ENSMUST00000158793 114 ntBASIC0.52□□□□□ -2.33
Shkbp1Q6P7W2 Mir7065-201ENSMUST00000185110 61 ntBASIC0.52□□□□□ -2.33
Shkbp1Q6P7W2 Gm45541-201ENSMUST00000210443 54 ntBASIC0.52□□□□□ -2.33
Shkbp1Q6P7W2 Gm25161-201ENSMUST00000158913 132 ntBASIC0.51□□□□□ -2.33
Shkbp1Q6P7W2 Gm24797-201ENSMUST00000178103 107 ntBASIC0.51□□□□□ -2.33
Shkbp1Q6P7W2 Gm22302-201ENSMUST00000082657 106 ntBASIC0.51□□□□□ -2.33
Shkbp1Q6P7W2 Gm26375-201ENSMUST00000101829 106 ntBASIC0.5□□□□□ -2.33
Shkbp1Q6P7W2 Gm24555-201ENSMUST00000104548 124 ntBASIC0.48□□□□□ -2.33
Shkbp1Q6P7W2 Gm22965-201ENSMUST00000157958 101 ntBASIC0.48□□□□□ -2.33
Shkbp1Q6P7W2 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.48□□□□□ -2.33
Shkbp1Q6P7W2 Gm24259-201ENSMUST00000083740 107 ntBASIC0.48□□□□□ -2.33
Shkbp1Q6P7W2 Gm25524-201ENSMUST00000101821 107 ntBASIC0.47□□□□□ -2.33
Shkbp1Q6P7W2 Gm43432-201ENSMUST00000196352 121 ntBASIC0.47□□□□□ -2.33
Shkbp1Q6P7W2 Gm44828-201ENSMUST00000203745 106 ntBASIC0.46□□□□□ -2.34
Shkbp1Q6P7W2 Mir224-201ENSMUST00000083608 82 ntBASIC0.46□□□□□ -2.34
Shkbp1Q6P7W2 Gm25522-201ENSMUST00000158394 105 ntBASIC0.45□□□□□ -2.34
Shkbp1Q6P7W2 Gm22746-201ENSMUST00000082494 107 ntBASIC0.45□□□□□ -2.34
Shkbp1Q6P7W2 Gm22401-201ENSMUST00000174927 117 ntBASIC0.44□□□□□ -2.34
Shkbp1Q6P7W2 Gm37750-201ENSMUST00000193563 129 ntBASIC0.44□□□□□ -2.34
Shkbp1Q6P7W2 Gm24723-201ENSMUST00000158233 132 ntBASIC0.43□□□□□ -2.34
Shkbp1Q6P7W2 Gm25326-201ENSMUST00000101903 107 ntBASIC0.41□□□□□ -2.34
Shkbp1Q6P7W2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.41□□□□□ -2.34
Shkbp1Q6P7W2 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.41□□□□□ -2.34
Shkbp1Q6P7W2 Gm25247-201ENSMUST00000175475 90 ntBASIC0.4□□□□□ -2.35
Shkbp1Q6P7W2 Gm25791-201ENSMUST00000083292 137 ntBASIC0.4□□□□□ -2.35
Shkbp1Q6P7W2 Gm23955-201ENSMUST00000157214 100 ntBASIC0.39□□□□□ -2.35
Shkbp1Q6P7W2 Gm24772-201ENSMUST00000158507 110 ntBASIC0.39□□□□□ -2.35
Shkbp1Q6P7W2 Gm28001-201ENSMUST00000183561 117 ntBASIC0.38□□□□□ -2.35
Shkbp1Q6P7W2 Gm23573-201ENSMUST00000104408 107 ntBASIC0.37□□□□□ -2.35
Shkbp1Q6P7W2 Gm22340-201ENSMUST00000157717 114 ntBASIC0.37□□□□□ -2.35
Shkbp1Q6P7W2 Gm23180-201ENSMUST00000158686 125 ntBASIC0.37□□□□□ -2.35
Shkbp1Q6P7W2 Gm45617-201ENSMUST00000211132 209 ntBASIC0.37□□□□□ -2.35
Shkbp1Q6P7W2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.36□□□□□ -2.35
Shkbp1Q6P7W2 Gm22838-201ENSMUST00000158437 99 ntBASIC0.36□□□□□ -2.35
Shkbp1Q6P7W2 Gm27475-201ENSMUST00000183420 61 ntBASIC0.36□□□□□ -2.35
Shkbp1Q6P7W2 Gm38208-201ENSMUST00000192476 114 ntBASIC0.36□□□□□ -2.35
Shkbp1Q6P7W2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Shkbp1Q6P7W2 Gm23630-201ENSMUST00000175292 104 ntBASIC0.35□□□□□ -2.35
Shkbp1Q6P7W2 Mir7077-201ENSMUST00000183991 57 ntBASIC0.34□□□□□ -2.36
Shkbp1Q6P7W2 Gm23173-201ENSMUST00000157161 160 ntBASIC0.33□□□□□ -2.36
Shkbp1Q6P7W2 Gm22474-201ENSMUST00000179407 107 ntBASIC0.33□□□□□ -2.36
Shkbp1Q6P7W2 Gm24508-201ENSMUST00000180104 107 ntBASIC0.33□□□□□ -2.36
Shkbp1Q6P7W2 Mir142b-201ENSMUST00000083486 115 ntBASIC0.33□□□□□ -2.36
Shkbp1Q6P7W2 Gm23821-201ENSMUST00000158738 106 ntBASIC0.32□□□□□ -2.36
Shkbp1Q6P7W2 Gm27749-201ENSMUST00000183651 125 ntBASIC0.32□□□□□ -2.36
Shkbp1Q6P7W2 Mir6896-201ENSMUST00000198033 73 ntBASIC0.32□□□□□ -2.36
Shkbp1Q6P7W2 Gm24445-201ENSMUST00000083981 107 ntBASIC0.32□□□□□ -2.36
Shkbp1Q6P7W2 Gm44328-201ENSMUST00000199331 75 ntBASIC0.31□□□□□ -2.36
Shkbp1Q6P7W2 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.3□□□□□ -2.36
Shkbp1Q6P7W2 Gm23159-201ENSMUST00000175088 77 ntBASIC0.3□□□□□ -2.36
Shkbp1Q6P7W2 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Shkbp1Q6P7W2 Mir7651-201ENSMUST00000184154 64 ntBASIC0.3□□□□□ -2.36
Shkbp1Q6P7W2 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.3□□□□□ -2.36
Shkbp1Q6P7W2 Mir710-201ENSMUST00000102088 110 ntBASIC0.29□□□□□ -2.36
Shkbp1Q6P7W2 Gm25375-201ENSMUST00000158157 135 ntBASIC0.29□□□□□ -2.36
Shkbp1Q6P7W2 Mir8107-201ENSMUST00000184024 117 ntBASIC0.29□□□□□ -2.36
Shkbp1Q6P7W2 Mir3967-201ENSMUST00000198710 68 ntBASIC0.29□□□□□ -2.36
Shkbp1Q6P7W2 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Shkbp1Q6P7W2 Gm22157-201ENSMUST00000158410 104 ntBASIC0.28□□□□□ -2.36
Shkbp1Q6P7W2 Gm22357-201ENSMUST00000082882 83 ntBASIC0.28□□□□□ -2.36
Shkbp1Q6P7W2 Gm23442-201ENSMUST00000082919 134 ntBASIC0.28□□□□□ -2.36
Shkbp1Q6P7W2 Gm37832-201ENSMUST00000118935 189 ntBASIC0.27□□□□□ -2.37
Shkbp1Q6P7W2 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Shkbp1Q6P7W2 Gm22088-201ENSMUST00000158341 117 ntBASIC0.26□□□□□ -2.37
Shkbp1Q6P7W2 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.26□□□□□ -2.37
Shkbp1Q6P7W2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.25□□□□□ -2.37
Shkbp1Q6P7W2 Gm24833-201ENSMUST00000116775 120 ntBASIC0.24□□□□□ -2.37
Shkbp1Q6P7W2 Gm24843-201ENSMUST00000158682 76 ntBASIC0.24□□□□□ -2.37
Shkbp1Q6P7W2 Gm24710-201ENSMUST00000175235 101 ntBASIC0.24□□□□□ -2.37
Shkbp1Q6P7W2 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms