Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm24445-201ENSMUST00000083981 107 ntBASIC0.95□□□□□ -2.26
Sh3rf1Q69ZI1 Gm25275-201ENSMUST00000104297 129 ntBASIC0.94□□□□□ -2.26
Sh3rf1Q69ZI1 Mir3105-201ENSMUST00000175480 85 ntBASIC0.93□□□□□ -2.26
Sh3rf1Q69ZI1 Gm24278-201ENSMUST00000104239 127 ntBASIC0.92□□□□□ -2.26
Sh3rf1Q69ZI1 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Sh3rf1Q69ZI1 Mir695-201ENSMUST00000102261 109 ntBASIC0.91□□□□□ -2.26
Sh3rf1Q69ZI1 Gm23961-201ENSMUST00000104685 97 ntBASIC0.91□□□□□ -2.26
Sh3rf1Q69ZI1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.91□□□□□ -2.26
Sh3rf1Q69ZI1 Gm23573-201ENSMUST00000104408 107 ntBASIC0.9□□□□□ -2.27
Sh3rf1Q69ZI1 Gm23955-201ENSMUST00000157214 100 ntBASIC0.9□□□□□ -2.27
Sh3rf1Q69ZI1 Gm23008-201ENSMUST00000158946 80 ntBASIC0.9□□□□□ -2.27
Sh3rf1Q69ZI1 Gm44345-201ENSMUST00000199560 135 ntBASIC0.89□□□□□ -2.27
Sh3rf1Q69ZI1 Gm23783-201ENSMUST00000157941 102 ntBASIC0.88□□□□□ -2.27
Sh3rf1Q69ZI1 Gm24710-201ENSMUST00000175235 101 ntBASIC0.88□□□□□ -2.27
Sh3rf1Q69ZI1 Gm24135-201ENSMUST00000179085 101 ntBASIC0.88□□□□□ -2.27
Sh3rf1Q69ZI1 Gm24579-201ENSMUST00000103964 144 ntBASIC0.87□□□□□ -2.27
Sh3rf1Q69ZI1 Gm24555-201ENSMUST00000104548 124 ntBASIC0.87□□□□□ -2.27
Sh3rf1Q69ZI1 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.87□□□□□ -2.27
Sh3rf1Q69ZI1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Sh3rf1Q69ZI1 Snord67-201ENSMUST00000104033 111 ntBASIC0.86□□□□□ -2.27
Sh3rf1Q69ZI1 Gm24377-201ENSMUST00000104398 131 ntBASIC0.86□□□□□ -2.27
Sh3rf1Q69ZI1 Gm26052-201ENSMUST00000104646 84 ntBASIC0.86□□□□□ -2.27
Sh3rf1Q69ZI1 Gm22340-201ENSMUST00000157717 114 ntBASIC0.86□□□□□ -2.27
Sh3rf1Q69ZI1 Gm27289-201ENSMUST00000183341 82 ntBASIC0.86□□□□□ -2.27
Sh3rf1Q69ZI1 Gm25378-201ENSMUST00000104333 129 ntBASIC0.85□□□□□ -2.27
Sh3rf1Q69ZI1 Mir362-201ENSMUST00000093592 65 ntBASIC0.85□□□□□ -2.27
Sh3rf1Q69ZI1 Gm23126-201ENSMUST00000104260 134 ntBASIC0.84□□□□□ -2.27
Sh3rf1Q69ZI1 Gm26259-201ENSMUST00000104778 97 ntBASIC0.84□□□□□ -2.27
Sh3rf1Q69ZI1 Gm26484-201ENSMUST00000158018 106 ntBASIC0.84□□□□□ -2.27
Sh3rf1Q69ZI1 Snord33-201ENSMUST00000083694 84 ntBASIC0.84□□□□□ -2.27
Sh3rf1Q69ZI1 Gm25222-201ENSMUST00000158199 126 ntBASIC0.83□□□□□ -2.28
Sh3rf1Q69ZI1 Gm20386-201ENSMUST00000174010 132 ntBASIC0.83□□□□□ -2.28
Sh3rf1Q69ZI1 Gm44457-201ENSMUST00000198109 76 ntBASIC0.83□□□□□ -2.28
Sh3rf1Q69ZI1 Mir363-201ENSMUST00000093598 75 ntBASIC0.83□□□□□ -2.28
Sh3rf1Q69ZI1 Gm24884-201ENSMUST00000158784 119 ntBASIC0.82□□□□□ -2.28
Sh3rf1Q69ZI1 Gm24218-201ENSMUST00000180163 105 ntBASIC0.81□□□□□ -2.28
Sh3rf1Q69ZI1 Gm38113-201ENSMUST00000193704 201 ntBASIC0.81□□□□□ -2.28
Sh3rf1Q69ZI1 Gm6607-201ENSMUST00000215035 328 ntBASIC0.81□□□□□ -2.28
Sh3rf1Q69ZI1 Gm25408-201ENSMUST00000104104 133 ntBASIC0.8□□□□□ -2.28
Sh3rf1Q69ZI1 Mir6389-201ENSMUST00000183661 102 ntBASIC0.8□□□□□ -2.28
Sh3rf1Q69ZI1 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.8□□□□□ -2.28
Sh3rf1Q69ZI1 Gm22357-201ENSMUST00000082882 83 ntBASIC0.79□□□□□ -2.28
Sh3rf1Q69ZI1 Gm24258-201ENSMUST00000083739 133 ntBASIC0.79□□□□□ -2.28
Sh3rf1Q69ZI1 Gm13577-201ENSMUST00000121365 205 ntBASIC0.78□□□□□ -2.28
Sh3rf1Q69ZI1 Gm24297-201ENSMUST00000158300 68 ntBASIC0.78□□□□□ -2.28
Sh3rf1Q69ZI1 Gm25522-201ENSMUST00000158394 105 ntBASIC0.78□□□□□ -2.28
Sh3rf1Q69ZI1 Gm44803-201ENSMUST00000204384 156 ntBASIC0.78□□□□□ -2.28
Sh3rf1Q69ZI1 Gm22981-201ENSMUST00000082611 75 ntBASIC0.78□□□□□ -2.28
Sh3rf1Q69ZI1 Mir670-201ENSMUST00000102380 100 ntBASIC0.77□□□□□ -2.29
Sh3rf1Q69ZI1 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.77□□□□□ -2.29
Sh3rf1Q69ZI1 Gm27607-201ENSMUST00000185162 122 ntBASIC0.76□□□□□ -2.29
Sh3rf1Q69ZI1 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.76□□□□□ -2.29
Sh3rf1Q69ZI1 Gm23321-201ENSMUST00000104465 126 ntBASIC0.74□□□□□ -2.29
Sh3rf1Q69ZI1 Gm23173-201ENSMUST00000157161 160 ntBASIC0.74□□□□□ -2.29
Sh3rf1Q69ZI1 Gm24323-201ENSMUST00000175342 77 ntBASIC0.74□□□□□ -2.29
Sh3rf1Q69ZI1 Gm24772-201ENSMUST00000158507 110 ntBASIC0.73□□□□□ -2.29
Sh3rf1Q69ZI1 Mir7065-201ENSMUST00000185110 61 ntBASIC0.73□□□□□ -2.29
Sh3rf1Q69ZI1 Mir219b-201ENSMUST00000198317 65 ntBASIC0.73□□□□□ -2.29
Sh3rf1Q69ZI1 Gm23735-201ENSMUST00000082551 134 ntBASIC0.73□□□□□ -2.29
Sh3rf1Q69ZI1 Mir18-201ENSMUST00000083469 96 ntBASIC0.73□□□□□ -2.29
Sh3rf1Q69ZI1 Mir3109-201ENSMUST00000175301 88 ntBASIC0.72□□□□□ -2.29
Sh3rf1Q69ZI1 Gm22302-201ENSMUST00000082657 106 ntBASIC0.72□□□□□ -2.29
Sh3rf1Q69ZI1 Gm25247-201ENSMUST00000175475 90 ntBASIC0.71□□□□□ -2.3
Sh3rf1Q69ZI1 Gm22127-201ENSMUST00000083239 106 ntBASIC0.71□□□□□ -2.3
Sh3rf1Q69ZI1 Gm24963-201ENSMUST00000157916 144 ntBASIC0.7□□□□□ -2.3
Sh3rf1Q69ZI1 Gm24531-201ENSMUST00000157945 100 ntBASIC0.7□□□□□ -2.3
Sh3rf1Q69ZI1 Gm22431-201ENSMUST00000158545 107 ntBASIC0.7□□□□□ -2.3
Sh3rf1Q69ZI1 Mir3065-201ENSMUST00000198674 87 ntBASIC0.7□□□□□ -2.3
Sh3rf1Q69ZI1 Gm25779-201ENSMUST00000116710 95 ntBASIC0.69□□□□□ -2.3
Sh3rf1Q69ZI1 Gm23787-201ENSMUST00000122538 73 ntBASIC0.68□□□□□ -2.3
Sh3rf1Q69ZI1 Gm22239-201ENSMUST00000175220 103 ntBASIC0.68□□□□□ -2.3
Sh3rf1Q69ZI1 Gm37750-201ENSMUST00000193563 129 ntBASIC0.68□□□□□ -2.3
Sh3rf1Q69ZI1 Mir216a-201ENSMUST00000083605 72 ntBASIC0.68□□□□□ -2.3
Sh3rf1Q69ZI1 Gm23969-201ENSMUST00000083324 74 ntBASIC0.67□□□□□ -2.3
Sh3rf1Q69ZI1 Gm25497-201ENSMUST00000104425 132 ntBASIC0.66□□□□□ -2.3
Sh3rf1Q69ZI1 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Sh3rf1Q69ZI1 Gm25886-201ENSMUST00000157780 114 ntBASIC0.66□□□□□ -2.3
Sh3rf1Q69ZI1 Gm45541-201ENSMUST00000210443 54 ntBASIC0.65□□□□□ -2.31
Sh3rf1Q69ZI1 Gm26306-201ENSMUST00000157773 119 ntBASIC0.64□□□□□ -2.31
Sh3rf1Q69ZI1 Gm25375-201ENSMUST00000158157 135 ntBASIC0.64□□□□□ -2.31
Sh3rf1Q69ZI1 Gm27798-201ENSMUST00000184989 71 ntBASIC0.64□□□□□ -2.31
Sh3rf1Q69ZI1 Gm45617-201ENSMUST00000211132 209 ntBASIC0.64□□□□□ -2.31
Sh3rf1Q69ZI1 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.63□□□□□ -2.31
Sh3rf1Q69ZI1 Gm26285-201ENSMUST00000177923 107 ntBASIC0.62□□□□□ -2.31
Sh3rf1Q69ZI1 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.62□□□□□ -2.31
Sh3rf1Q69ZI1 Gm23622-201ENSMUST00000082460 107 ntBASIC0.62□□□□□ -2.31
Sh3rf1Q69ZI1 Mir142b-201ENSMUST00000083486 115 ntBASIC0.62□□□□□ -2.31
Sh3rf1Q69ZI1 Mir224-201ENSMUST00000083608 82 ntBASIC0.62□□□□□ -2.31
Sh3rf1Q69ZI1 Gm23605-201ENSMUST00000157255 127 ntBASIC0.61□□□□□ -2.31
Sh3rf1Q69ZI1 Gm37832-201ENSMUST00000118935 189 ntBASIC0.6□□□□□ -2.31
Sh3rf1Q69ZI1 Gm26236-201ENSMUST00000175536 137 ntBASIC0.58□□□□□ -2.32
Sh3rf1Q69ZI1 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.58□□□□□ -2.32
Sh3rf1Q69ZI1 Mir141-201ENSMUST00000083540 72 ntBASIC0.58□□□□□ -2.32
Sh3rf1Q69ZI1 Gm24467-201ENSMUST00000157887 126 ntBASIC0.57□□□□□ -2.32
Sh3rf1Q69ZI1 Gm23240-201ENSMUST00000083009 121 ntBASIC0.57□□□□□ -2.32
Sh3rf1Q69ZI1 Gm24381-201ENSMUST00000122697 104 ntBASIC0.56□□□□□ -2.32
Sh3rf1Q69ZI1 Gm22335-201ENSMUST00000157724 99 ntBASIC0.56□□□□□ -2.32
Sh3rf1Q69ZI1 Gm22157-201ENSMUST00000158410 104 ntBASIC0.56□□□□□ -2.32
Sh3rf1Q69ZI1 Mir6904-201ENSMUST00000183443 67 ntBASIC0.56□□□□□ -2.32
Sh3rf1Q69ZI1 Gm43432-201ENSMUST00000196352 121 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 166.5 ms