Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm37750-201ENSMUST00000193563 129 ntBASIC0,25□□□□□ -2,37
Rnf180Q3U827 Gm25791-201ENSMUST00000083292 137 ntBASIC0,25□□□□□ -2,37
Rnf180Q3U827 Gm25010-201ENSMUST00000158403 65 ntBASIC0,24□□□□□ -2,37
Rnf180Q3U827 Mir6365-201ENSMUST00000183990 101 ntBASIC0,24□□□□□ -2,37
Rnf180Q3U827 Gm23376-201ENSMUST00000082938 160 ntBASIC0,24□□□□□ -2,37
Rnf180Q3U827 Gm24070-201ENSMUST00000104519 130 ntBASIC0,23□□□□□ -2,37
Rnf180Q3U827 Gm44328-201ENSMUST00000199331 75 ntBASIC0,23□□□□□ -2,37
Rnf180Q3U827 Gm24796-201ENSMUST00000104007 107 ntBASIC0,22□□□□□ -2,37
Rnf180Q3U827 Gm25952-201ENSMUST00000175329 74 ntBASIC0,22□□□□□ -2,37
Rnf180Q3U827 Gm27415-201ENSMUST00000183720 95 ntBASIC0,22□□□□□ -2,37
Rnf180Q3U827 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0,21□□□□□ -2,38
Rnf180Q3U827 Gm22087-201ENSMUST00000158339 88 ntBASIC0,21□□□□□ -2,38
Rnf180Q3U827 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0,21□□□□□ -2,38
Rnf180Q3U827 Mir23a-201ENSMUST00000083677 75 ntBASIC0,21□□□□□ -2,38
Rnf180Q3U827 Mir574-201ENSMUST00000103854 78 ntBASIC0,2□□□□□ -2,38
Rnf180Q3U827 Gm25522-201ENSMUST00000158394 105 ntBASIC0,19□□□□□ -2,38
Rnf180Q3U827 Gm22838-201ENSMUST00000158437 99 ntBASIC0,19□□□□□ -2,38
Rnf180Q3U827 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0,19□□□□□ -2,38
Rnf180Q3U827 Gm23293-201ENSMUST00000082552 104 ntBASIC0,19□□□□□ -2,38
Rnf180Q3U827 Gm24372-201ENSMUST00000104400 110 ntBASIC0,18□□□□□ -2,38
Rnf180Q3U827 Gm25309-201ENSMUST00000116728 126 ntBASIC0,18□□□□□ -2,38
Rnf180Q3U827 Mir876-201ENSMUST00000104659 81 ntBASIC0,17□□□□□ -2,38
Rnf180Q3U827 Gm25440-201ENSMUST00000158279 154 ntBASIC0,17□□□□□ -2,38
Rnf180Q3U827 Gm23056-201ENSMUST00000082803 111 ntBASIC0,17□□□□□ -2,38
Rnf180Q3U827 Mir382-201ENSMUST00000083494 76 ntBASIC0,17□□□□□ -2,38
Rnf180Q3U827 Gm25186-201ENSMUST00000083909 108 ntBASIC0,17□□□□□ -2,38
Rnf180Q3U827 Gm22071-201ENSMUST00000116857 83 ntBASIC0,16□□□□□ -2,38
Rnf180Q3U827 Gm24946-201ENSMUST00000158332 106 ntBASIC0,16□□□□□ -2,38
Rnf180Q3U827 Mir3064-201ENSMUST00000175532 67 ntBASIC0,16□□□□□ -2,38
Rnf180Q3U827 Gm45125-201ENSMUST00000206908 151 ntBASIC0,16□□□□□ -2,38
Rnf180Q3U827 Gm24918-201ENSMUST00000083022 130 ntBASIC0,16□□□□□ -2,38
Rnf180Q3U827 Gm22942-201ENSMUST00000158563 124 ntBASIC0,15□□□□□ -2,39
Rnf180Q3U827 Mir3967-201ENSMUST00000198710 68 ntBASIC0,15□□□□□ -2,39
Rnf180Q3U827 Snora62-201ENSMUST00000082991 149 ntBASIC0,15□□□□□ -2,39
Rnf180Q3U827 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0,14□□□□□ -2,39
Rnf180Q3U827 Gm23494-201ENSMUST00000116830 126 ntBASIC0,14□□□□□ -2,39
Rnf180Q3U827 Gm23477-201ENSMUST00000158882 128 ntBASIC0,14□□□□□ -2,39
Rnf180Q3U827 Gm25802-201ENSMUST00000082639 77 ntBASIC0,14□□□□□ -2,39
Rnf180Q3U827 Gm25045-201ENSMUST00000122670 99 ntBASIC0,13□□□□□ -2,39
Rnf180Q3U827 Gm24296-201ENSMUST00000158297 106 ntBASIC0,13□□□□□ -2,39
Rnf180Q3U827 Gm22165-201ENSMUST00000158414 103 ntBASIC0,13□□□□□ -2,39
Rnf180Q3U827 Gm23159-201ENSMUST00000175088 77 ntBASIC0,13□□□□□ -2,39
Rnf180Q3U827 Gm23690-201ENSMUST00000083036 94 ntBASIC0,13□□□□□ -2,39
Rnf180Q3U827 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0,12□□□□□ -2,39
Rnf180Q3U827 Mir717-201ENSMUST00000102259 109 ntBASIC0,11□□□□□ -2,39
Rnf180Q3U827 Mir672-201ENSMUST00000102331 100 ntBASIC0,11□□□□□ -2,39
Rnf180Q3U827 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0,11□□□□□ -2,39
Rnf180Q3U827 Gm38208-201ENSMUST00000192476 114 ntBASIC0,11□□□□□ -2,39
Rnf180Q3U827 Mir34c-201ENSMUST00000083653 77 ntBASIC0,11□□□□□ -2,39
Rnf180Q3U827 Mir487b-201ENSMUST00000102265 82 ntBASIC0,1□□□□□ -2,39
Rnf180Q3U827 Gm23726-201ENSMUST00000178937 67 ntBASIC0,1□□□□□ -2,39
Rnf180Q3U827 Gm24201-201ENSMUST00000082946 125 ntBASIC0,1□□□□□ -2,39
Rnf180Q3U827 Snord85-201ENSMUST00000083262 73 ntBASIC0,1□□□□□ -2,39
Rnf180Q3U827 Gm24256-201ENSMUST00000083696 84 ntBASIC0,1□□□□□ -2,39
Rnf180Q3U827 Gm27263-201ENSMUST00000184760 76 ntBASIC0,09□□□□□ -2,4
Rnf180Q3U827 Gm20305-201ENSMUST00000193226 177 ntBASIC0,09□□□□□ -2,4
Rnf180Q3U827 Gm22368-201ENSMUST00000102416 109 ntBASIC0,08□□□□□ -2,4
Rnf180Q3U827 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0,08□□□□□ -2,4
Rnf180Q3U827 Gm22095-201ENSMUST00000158984 150 ntBASIC0,08□□□□□ -2,4
Rnf180Q3U827 Gm24218-201ENSMUST00000180163 105 ntBASIC0,08□□□□□ -2,4
Rnf180Q3U827 Mir7651-201ENSMUST00000184154 64 ntBASIC0,08□□□□□ -2,4
Rnf180Q3U827 Gm6607-201ENSMUST00000215035 328 ntBASIC0,08□□□□□ -2,4
Rnf180Q3U827 Mir15b-201ENSMUST00000083646 64 ntBASIC0,08□□□□□ -2,4
Rnf180Q3U827 Gm24587-201ENSMUST00000116697 89 ntBASIC0,07□□□□□ -2,4
Rnf180Q3U827 Gm24378-201ENSMUST00000122699 106 ntBASIC0,07□□□□□ -2,4
Rnf180Q3U827 Gm23442-201ENSMUST00000082919 134 ntBASIC0,07□□□□□ -2,4
Rnf180Q3U827 Gm23017-201ENSMUST00000177583 72 ntBASIC0,06□□□□□ -2,4
Rnf180Q3U827 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0,06□□□□□ -2,4
Rnf180Q3U827 Gm24091-201ENSMUST00000082550 83 ntBASIC0,06□□□□□ -2,4
Rnf180Q3U827 Snord45b-201ENSMUST00000082797 71 ntBASIC0,06□□□□□ -2,4
Rnf180Q3U827 Gm23711-201ENSMUST00000083856 83 ntBASIC0,06□□□□□ -2,4
Rnf180Q3U827 Mir297-1-201ENSMUST00000103800 76 ntBASIC0,05□□□□□ -2,4
Rnf180Q3U827 Gm22077-201ENSMUST00000157594 93 ntBASIC0,05□□□□□ -2,4
Rnf180Q3U827 Mir344-2-201ENSMUST00000175446 80 ntBASIC0,05□□□□□ -2,4
Rnf180Q3U827 Gm24843-201ENSMUST00000158682 76 ntBASIC0,04□□□□□ -2,4
Rnf180Q3U827 Gm25703-201ENSMUST00000083123 151 ntBASIC0,04□□□□□ -2,4
Rnf180Q3U827 Mir214-201ENSMUST00000083582 110 ntBASIC0,03□□□□□ -2,4
Rnf180Q3U827 Gm24400-201ENSMUST00000157865 107 ntBASIC0,02□□□□□ -2,41
Rnf180Q3U827 Snora16a-202ENSMUST00000196061 137 ntBASIC0,02□□□□□ -2,41
Rnf180Q3U827 Gm22595-201ENSMUST00000104250 130 ntBASIC0,01□□□□□ -2,41
Rnf180Q3U827 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0,01□□□□□ -2,41
Rnf180Q3U827 Gm22069-201ENSMUST00000179911 107 ntBASIC0,01□□□□□ -2,41
Rnf180Q3U827 Gm22327-201ENSMUST00000158899 108 ntBASIC0□□□□□ -2,41
Rnf180Q3U827 Gm23590-201ENSMUST00000157661 104 ntBASIC-0,01□□□□□ -2,41
Rnf180Q3U827 Gm26485-201ENSMUST00000158019 64 ntBASIC-0,01□□□□□ -2,41
Rnf180Q3U827 Gm22607-201ENSMUST00000158291 105 ntBASIC-0,01□□□□□ -2,41
Rnf180Q3U827 Gm44375-201ENSMUST00000196657 150 ntBASIC-0,01□□□□□ -2,41
Rnf180Q3U827 Mir494-201ENSMUST00000093632 85 ntBASIC-0,02□□□□□ -2,41
Rnf180Q3U827 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0,03□□□□□ -2,41
Rnf180Q3U827 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-0,03□□□□□ -2,41
Rnf180Q3U827 Gm11966-201ENSMUST00000119907 87 ntBASIC-0,04□□□□□ -2,42
Rnf180Q3U827 Gm27749-201ENSMUST00000183651 125 ntBASIC-0,04□□□□□ -2,42
Rnf180Q3U827 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0,04□□□□□ -2,42
Rnf180Q3U827 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0,04□□□□□ -2,42
Rnf180Q3U827 Gm23856-201ENSMUST00000158380 99 ntBASIC-0,05□□□□□ -2,42
Rnf180Q3U827 Gm22943-201ENSMUST00000158564 76 ntBASIC-0,05□□□□□ -2,42
Rnf180Q3U827 Gm26210-201ENSMUST00000158680 91 ntBASIC-0,06□□□□□ -2,42
Rnf180Q3U827 Mir327-201ENSMUST00000199328 69 ntBASIC-0,06□□□□□ -2,42
Rnf180Q3U827 Gm45374-201ENSMUST00000211388 136 ntBASIC-0,06□□□□□ -2,42
Rnf180Q3U827 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0,08□□□□□ -2,42
Retrieved 100 of 76,532 protein–RNA pairs in 93,4 ms