Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.12□□□□□ -2.39
Ssbp4Q3U4B1 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.12□□□□□ -2.39
Ssbp4Q3U4B1 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.12□□□□□ -2.39
Ssbp4Q3U4B1 Snora62-201ENSMUST00000082991 149 ntBASIC0.12□□□□□ -2.39
Ssbp4Q3U4B1 Gm24918-201ENSMUST00000083022 130 ntBASIC0.12□□□□□ -2.39
Ssbp4Q3U4B1 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Gm23785-201ENSMUST00000116741 96 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Gm23494-201ENSMUST00000116830 126 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Gm24378-201ENSMUST00000122699 106 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Gm26485-201ENSMUST00000158019 64 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Gm22838-201ENSMUST00000158437 99 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Gm27263-201ENSMUST00000184760 76 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Snord45b-201ENSMUST00000082797 71 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Mir15b-201ENSMUST00000083646 64 ntBASIC0.11□□□□□ -2.39
Ssbp4Q3U4B1 Gm23531-201ENSMUST00000104567 68 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm11966-201ENSMUST00000119907 87 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm22067-201ENSMUST00000122790 107 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm22088-201ENSMUST00000158341 117 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm23761-201ENSMUST00000158347 104 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm23856-201ENSMUST00000158380 99 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm23159-201ENSMUST00000175088 77 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm24331-201ENSMUST00000175099 67 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm23801-201ENSMUST00000175561 67 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm23017-201ENSMUST00000177583 72 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm24485-201ENSMUST00000178283 67 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Mir494-201ENSMUST00000093632 85 ntBASIC0.1□□□□□ -2.39
Ssbp4Q3U4B1 Gm23036-201ENSMUST00000157885 99 ntBASIC0.09□□□□□ -2.4
Ssbp4Q3U4B1 Gm44328-201ENSMUST00000199331 75 ntBASIC0.09□□□□□ -2.4
Ssbp4Q3U4B1 Gm23442-201ENSMUST00000082919 134 ntBASIC0.09□□□□□ -2.4
Ssbp4Q3U4B1 Gm25522-201ENSMUST00000158394 105 ntBASIC0.08□□□□□ -2.4
Ssbp4Q3U4B1 Mir3089-201ENSMUST00000175350 84 ntBASIC0.08□□□□□ -2.4
Ssbp4Q3U4B1 Gm22298-201ENSMUST00000082662 133 ntBASIC0.08□□□□□ -2.4
Ssbp4Q3U4B1 Gm22595-201ENSMUST00000104250 130 ntBASIC0.07□□□□□ -2.4
Ssbp4Q3U4B1 Mir876-201ENSMUST00000104659 81 ntBASIC0.07□□□□□ -2.4
Ssbp4Q3U4B1 Gm23278-201ENSMUST00000157911 143 ntBASIC0.07□□□□□ -2.4
Ssbp4Q3U4B1 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.07□□□□□ -2.4
Ssbp4Q3U4B1 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.07□□□□□ -2.4
Ssbp4Q3U4B1 Mir669f-201ENSMUST00000103850 121 ntBASIC0.06□□□□□ -2.4
Ssbp4Q3U4B1 Gm25885-201ENSMUST00000157779 109 ntBASIC0.06□□□□□ -2.4
Ssbp4Q3U4B1 Gm24400-201ENSMUST00000157865 107 ntBASIC0.05□□□□□ -2.4
Ssbp4Q3U4B1 Gm24467-201ENSMUST00000157887 126 ntBASIC0.05□□□□□ -2.4
Ssbp4Q3U4B1 Gm24843-201ENSMUST00000158682 76 ntBASIC0.05□□□□□ -2.4
Ssbp4Q3U4B1 Gm22327-201ENSMUST00000158899 108 ntBASIC0.05□□□□□ -2.4
Ssbp4Q3U4B1 Snord85-201ENSMUST00000083262 73 ntBASIC0.05□□□□□ -2.4
Ssbp4Q3U4B1 Gm22368-201ENSMUST00000102416 109 ntBASIC0.04□□□□□ -2.4
Ssbp4Q3U4B1 Gm25497-201ENSMUST00000104425 132 ntBASIC0.04□□□□□ -2.4
Ssbp4Q3U4B1 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Ssbp4Q3U4B1 Gm25847-201ENSMUST00000116793 96 ntBASIC0.04□□□□□ -2.4
Ssbp4Q3U4B1 Mir327-201ENSMUST00000199328 69 ntBASIC0.04□□□□□ -2.4
Ssbp4Q3U4B1 Gm23237-201ENSMUST00000104639 92 ntBASIC0.03□□□□□ -2.4
Ssbp4Q3U4B1 Gm22048-201ENSMUST00000104721 89 ntBASIC0.03□□□□□ -2.4
Ssbp4Q3U4B1 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm22540-201ENSMUST00000158168 117 ntBASIC0.02□□□□□ -2.41
Ssbp4Q3U4B1 Mir7651-201ENSMUST00000184154 64 ntBASIC0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm38208-201ENSMUST00000192476 114 ntBASIC0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Ssbp4Q3U4B1 Mir672-201ENSMUST00000102331 100 ntBASIC0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm22962-201ENSMUST00000157962 73 ntBASIC0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm24903-201ENSMUST00000158131 126 ntBASIC0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm23072-201ENSMUST00000158243 123 ntBASIC0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm26257-201ENSMUST00000122500 107 ntBASIC0□□□□□ -2.41
Ssbp4Q3U4B1 Gm23590-201ENSMUST00000157661 104 ntBASIC0□□□□□ -2.41
Ssbp4Q3U4B1 Gm26210-201ENSMUST00000158680 91 ntBASIC0□□□□□ -2.41
Ssbp4Q3U4B1 Gm27749-201ENSMUST00000183651 125 ntBASIC0□□□□□ -2.41
Ssbp4Q3U4B1 Mir7231-201ENSMUST00000196252 61 ntBASIC0□□□□□ -2.41
Ssbp4Q3U4B1 Gm25552-201ENSMUST00000158081 91 ntBASIC-0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.01□□□□□ -2.41
Ssbp4Q3U4B1 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm25183-201ENSMUST00000157752 106 ntBASIC-0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm23649-201ENSMUST00000179007 107 ntBASIC-0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm25354-201ENSMUST00000179110 105 ntBASIC-0.02□□□□□ -2.41
Ssbp4Q3U4B1 Mir141-201ENSMUST00000083540 72 ntBASIC-0.02□□□□□ -2.41
Ssbp4Q3U4B1 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.03□□□□□ -2.41
Ssbp4Q3U4B1 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.03□□□□□ -2.41
Ssbp4Q3U4B1 Gm23826-201ENSMUST00000157394 119 ntBASIC-0.03□□□□□ -2.41
Ssbp4Q3U4B1 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.03□□□□□ -2.41
Ssbp4Q3U4B1 AC157278.1-201ENSMUST00000221621 148 ntBASIC-0.03□□□□□ -2.41
Ssbp4Q3U4B1 Mir382-201ENSMUST00000083494 76 ntBASIC-0.03□□□□□ -2.41
Ssbp4Q3U4B1 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.03□□□□□ -2.41
Ssbp4Q3U4B1 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.04□□□□□ -2.42
Ssbp4Q3U4B1 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.04□□□□□ -2.42
Ssbp4Q3U4B1 Gm25648-201ENSMUST00000177844 79 ntBASIC-0.04□□□□□ -2.42
Ssbp4Q3U4B1 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.04□□□□□ -2.42
Ssbp4Q3U4B1 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.04□□□□□ -2.42
Ssbp4Q3U4B1 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.05□□□□□ -2.42
Ssbp4Q3U4B1 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.05□□□□□ -2.42
Ssbp4Q3U4B1 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.05□□□□□ -2.42
Ssbp4Q3U4B1 Snord57-201ENSMUST00000083338 72 ntBASIC-0.05□□□□□ -2.42
Ssbp4Q3U4B1 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.05□□□□□ -2.42
Ssbp4Q3U4B1 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.06□□□□□ -2.42
Ssbp4Q3U4B1 Mir191-201ENSMUST00000196210 74 ntBASIC-0.06□□□□□ -2.42
Ssbp4Q3U4B1 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.06□□□□□ -2.42
Ssbp4Q3U4B1 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.06□□□□□ -2.42
Ssbp4Q3U4B1 Gm27450-201ENSMUST00000104632 90 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms