Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.49□□□□□ -2.33
Col28a1Q2UY11 Mir23a-201ENSMUST00000083677 75 ntBASIC0.49□□□□□ -2.33
Col28a1Q2UY11 Gm22039-201ENSMUST00000157278 132 ntBASIC0.48□□□□□ -2.33
Col28a1Q2UY11 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.48□□□□□ -2.33
Col28a1Q2UY11 Gm26139-201ENSMUST00000180098 107 ntBASIC0.48□□□□□ -2.33
Col28a1Q2UY11 Mir6389-201ENSMUST00000183661 102 ntBASIC0.48□□□□□ -2.33
Col28a1Q2UY11 Gm24612-201ENSMUST00000083267 107 ntBASIC0.48□□□□□ -2.33
Col28a1Q2UY11 Gm25652-201ENSMUST00000083780 103 ntBASIC0.48□□□□□ -2.33
Col28a1Q2UY11 Gm25275-201ENSMUST00000104297 129 ntBASIC0.47□□□□□ -2.33
Col28a1Q2UY11 Gm25375-201ENSMUST00000158157 135 ntBASIC0.47□□□□□ -2.33
Col28a1Q2UY11 Gm29344-201ENSMUST00000068143 210 ntBASIC0.47□□□□□ -2.33
Col28a1Q2UY11 Gm22455-201ENSMUST00000082580 71 ntBASIC0.47□□□□□ -2.33
Col28a1Q2UY11 Gm23730-201ENSMUST00000083236 107 ntBASIC0.47□□□□□ -2.33
Col28a1Q2UY11 Snord67-201ENSMUST00000104033 111 ntBASIC0.46□□□□□ -2.34
Col28a1Q2UY11 Gm27263-201ENSMUST00000184760 76 ntBASIC0.46□□□□□ -2.34
Col28a1Q2UY11 Gm27607-201ENSMUST00000185162 122 ntBASIC0.46□□□□□ -2.34
Col28a1Q2UY11 Gm44803-201ENSMUST00000204384 156 ntBASIC0.46□□□□□ -2.34
Col28a1Q2UY11 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Col28a1Q2UY11 Gm22981-201ENSMUST00000082611 75 ntBASIC0.46□□□□□ -2.34
Col28a1Q2UY11 Gm23494-201ENSMUST00000116830 126 ntBASIC0.45□□□□□ -2.34
Col28a1Q2UY11 Gm26491-201ENSMUST00000179268 121 ntBASIC0.45□□□□□ -2.34
Col28a1Q2UY11 Gm24725-201ENSMUST00000158229 125 ntBASIC0.44□□□□□ -2.34
Col28a1Q2UY11 Gm22239-201ENSMUST00000175220 103 ntBASIC0.44□□□□□ -2.34
Col28a1Q2UY11 Mir7065-201ENSMUST00000185110 61 ntBASIC0.44□□□□□ -2.34
Col28a1Q2UY11 Mir7231-201ENSMUST00000196252 61 ntBASIC0.44□□□□□ -2.34
Col28a1Q2UY11 Snora62-201ENSMUST00000082991 149 ntBASIC0.44□□□□□ -2.34
Col28a1Q2UY11 Gm25705-201ENSMUST00000083119 104 ntBASIC0.44□□□□□ -2.34
Col28a1Q2UY11 Gm23672-201ENSMUST00000157471 107 ntBASIC0.43□□□□□ -2.34
Col28a1Q2UY11 Gm23180-201ENSMUST00000158686 125 ntBASIC0.43□□□□□ -2.34
Col28a1Q2UY11 Gm43432-201ENSMUST00000196352 121 ntBASIC0.43□□□□□ -2.34
Col28a1Q2UY11 Gm45541-201ENSMUST00000210443 54 ntBASIC0.43□□□□□ -2.34
Col28a1Q2UY11 Mir18-201ENSMUST00000083469 96 ntBASIC0.43□□□□□ -2.34
Col28a1Q2UY11 Mir363-201ENSMUST00000093598 75 ntBASIC0.43□□□□□ -2.34
Col28a1Q2UY11 Gm24701-201ENSMUST00000101946 105 ntBASIC0.42□□□□□ -2.34
Col28a1Q2UY11 Gm25186-201ENSMUST00000083909 108 ntBASIC0.42□□□□□ -2.34
Col28a1Q2UY11 Mir669f-201ENSMUST00000103850 121 ntBASIC0.41□□□□□ -2.34
Col28a1Q2UY11 Gm24963-201ENSMUST00000157916 144 ntBASIC0.41□□□□□ -2.34
Col28a1Q2UY11 Gm23017-201ENSMUST00000177583 72 ntBASIC0.41□□□□□ -2.34
Col28a1Q2UY11 Mir3065-201ENSMUST00000198674 87 ntBASIC0.41□□□□□ -2.34
Col28a1Q2UY11 Gm22298-201ENSMUST00000082662 133 ntBASIC0.41□□□□□ -2.34
Col28a1Q2UY11 Gm25465-201ENSMUST00000157716 105 ntBASIC0.4□□□□□ -2.35
Col28a1Q2UY11 Gm23994-201ENSMUST00000158059 88 ntBASIC0.4□□□□□ -2.35
Col28a1Q2UY11 Mir6896-201ENSMUST00000198033 73 ntBASIC0.4□□□□□ -2.35
Col28a1Q2UY11 Gm44828-201ENSMUST00000203745 106 ntBASIC0.4□□□□□ -2.35
Col28a1Q2UY11 Gm25802-201ENSMUST00000082639 77 ntBASIC0.4□□□□□ -2.35
Col28a1Q2UY11 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.4□□□□□ -2.35
Col28a1Q2UY11 Gm25497-201ENSMUST00000104425 132 ntBASIC0.39□□□□□ -2.35
Col28a1Q2UY11 Mir7077-201ENSMUST00000183991 57 ntBASIC0.39□□□□□ -2.35
Col28a1Q2UY11 Gm23969-201ENSMUST00000083324 74 ntBASIC0.39□□□□□ -2.35
Col28a1Q2UY11 Mir224-201ENSMUST00000083608 82 ntBASIC0.39□□□□□ -2.35
Col28a1Q2UY11 Gm24467-201ENSMUST00000157887 126 ntBASIC0.38□□□□□ -2.35
Col28a1Q2UY11 Gm22088-201ENSMUST00000158341 117 ntBASIC0.38□□□□□ -2.35
Col28a1Q2UY11 Snord57-201ENSMUST00000083338 72 ntBASIC0.37□□□□□ -2.35
Col28a1Q2UY11 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.37□□□□□ -2.35
Col28a1Q2UY11 Gm25087-201ENSMUST00000101992 78 ntBASIC0.36□□□□□ -2.35
Col28a1Q2UY11 Gm26303-201ENSMUST00000116845 119 ntBASIC0.36□□□□□ -2.35
Col28a1Q2UY11 Gm22965-201ENSMUST00000157958 101 ntBASIC0.36□□□□□ -2.35
Col28a1Q2UY11 Gm26467-201ENSMUST00000097257 78 ntBASIC0.36□□□□□ -2.35
Col28a1Q2UY11 Gm23278-201ENSMUST00000157911 143 ntBASIC0.35□□□□□ -2.35
Col28a1Q2UY11 Gm24996-201ENSMUST00000158390 99 ntBASIC0.35□□□□□ -2.35
Col28a1Q2UY11 Gm25522-201ENSMUST00000158394 105 ntBASIC0.35□□□□□ -2.35
Col28a1Q2UY11 Gm22016-201ENSMUST00000158793 114 ntBASIC0.35□□□□□ -2.35
Col28a1Q2UY11 Gm37750-201ENSMUST00000193563 129 ntBASIC0.35□□□□□ -2.35
Col28a1Q2UY11 Gm23531-201ENSMUST00000104567 68 ntBASIC0.34□□□□□ -2.36
Col28a1Q2UY11 Gm24259-201ENSMUST00000083740 107 ntBASIC0.34□□□□□ -2.36
Col28a1Q2UY11 Gm24797-201ENSMUST00000178103 107 ntBASIC0.32□□□□□ -2.36
Col28a1Q2UY11 Gm22759-201ENSMUST00000102276 96 ntBASIC0.31□□□□□ -2.36
Col28a1Q2UY11 Gm26375-201ENSMUST00000101829 106 ntBASIC0.3□□□□□ -2.36
Col28a1Q2UY11 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Col28a1Q2UY11 Gm25885-201ENSMUST00000157779 109 ntBASIC0.3□□□□□ -2.36
Col28a1Q2UY11 Gm27475-201ENSMUST00000183420 61 ntBASIC0.3□□□□□ -2.36
Col28a1Q2UY11 Gm28001-201ENSMUST00000183561 117 ntBASIC0.3□□□□□ -2.36
Col28a1Q2UY11 Mir710-201ENSMUST00000102088 110 ntBASIC0.29□□□□□ -2.36
Col28a1Q2UY11 Gm24723-201ENSMUST00000158233 132 ntBASIC0.29□□□□□ -2.36
Col28a1Q2UY11 Scarna8-201ENSMUST00000158333 131 ntBASIC0.29□□□□□ -2.36
Col28a1Q2UY11 Gm22401-201ENSMUST00000174927 117 ntBASIC0.29□□□□□ -2.36
Col28a1Q2UY11 Gm25524-201ENSMUST00000101821 107 ntBASIC0.28□□□□□ -2.36
Col28a1Q2UY11 Gm25326-201ENSMUST00000101903 107 ntBASIC0.28□□□□□ -2.36
Col28a1Q2UY11 Gm22838-201ENSMUST00000158437 99 ntBASIC0.28□□□□□ -2.36
Col28a1Q2UY11 Gm26116-201ENSMUST00000175600 77 ntBASIC0.28□□□□□ -2.36
Col28a1Q2UY11 Gm45617-201ENSMUST00000211132 209 ntBASIC0.28□□□□□ -2.36
Col28a1Q2UY11 Gm22746-201ENSMUST00000082494 107 ntBASIC0.28□□□□□ -2.36
Col28a1Q2UY11 Gm25791-201ENSMUST00000083292 137 ntBASIC0.28□□□□□ -2.36
Col28a1Q2UY11 Gm23955-201ENSMUST00000157214 100 ntBASIC0.27□□□□□ -2.37
Col28a1Q2UY11 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.27□□□□□ -2.37
Col28a1Q2UY11 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.26□□□□□ -2.37
Col28a1Q2UY11 Gm23159-201ENSMUST00000175088 77 ntBASIC0.24□□□□□ -2.37
Col28a1Q2UY11 Gm23573-201ENSMUST00000104408 107 ntBASIC0.23□□□□□ -2.37
Col28a1Q2UY11 Gm23821-201ENSMUST00000158738 106 ntBASIC0.23□□□□□ -2.37
Col28a1Q2UY11 Gm38208-201ENSMUST00000192476 114 ntBASIC0.23□□□□□ -2.37
Col28a1Q2UY11 Gm23173-201ENSMUST00000157161 160 ntBASIC0.22□□□□□ -2.37
Col28a1Q2UY11 Gm24508-201ENSMUST00000180104 107 ntBASIC0.22□□□□□ -2.37
Col28a1Q2UY11 Mir8107-201ENSMUST00000184024 117 ntBASIC0.22□□□□□ -2.37
Col28a1Q2UY11 Gm24833-201ENSMUST00000116775 120 ntBASIC0.21□□□□□ -2.38
Col28a1Q2UY11 Gm22474-201ENSMUST00000179407 107 ntBASIC0.2□□□□□ -2.38
Col28a1Q2UY11 Gm27749-201ENSMUST00000183651 125 ntBASIC0.2□□□□□ -2.38
Col28a1Q2UY11 Mir7651-201ENSMUST00000184154 64 ntBASIC0.2□□□□□ -2.38
Col28a1Q2UY11 Mir3967-201ENSMUST00000198710 68 ntBASIC0.2□□□□□ -2.38
Col28a1Q2UY11 Gm44328-201ENSMUST00000199331 75 ntBASIC0.2□□□□□ -2.38
Col28a1Q2UY11 Gm23442-201ENSMUST00000082919 134 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms