Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Mir92-2-201ENSMUST00000083679 91 ntBASIC1,23□□□□□ -2,21
Col17a1Q07563 Gm24271-201ENSMUST00000102327 111 ntBASIC1,22□□□□□ -2,21
Col17a1Q07563 Gm25378-201ENSMUST00000104333 129 ntBASIC1,22□□□□□ -2,21
Col17a1Q07563 Gm24777-201ENSMUST00000157644 107 ntBASIC1,21□□□□□ -2,22
Col17a1Q07563 Gm24297-201ENSMUST00000158300 68 ntBASIC1,21□□□□□ -2,22
Col17a1Q07563 Gm22357-201ENSMUST00000082882 83 ntBASIC1,21□□□□□ -2,22
Col17a1Q07563 Gm24020-201ENSMUST00000180156 108 ntBASIC1,2□□□□□ -2,22
Col17a1Q07563 Gm38323-201ENSMUST00000192450 210 ntBASIC1,2□□□□□ -2,22
Col17a1Q07563 Gm26224-201ENSMUST00000082506 80 ntBASIC1,2□□□□□ -2,22
Col17a1Q07563 Gm24500-201ENSMUST00000158447 124 ntBASIC1,19□□□□□ -2,22
Col17a1Q07563 Gm44211-201ENSMUST00000204867 145 ntBASIC1,19□□□□□ -2,22
Col17a1Q07563 Gm23735-201ENSMUST00000082551 134 ntBASIC1,19□□□□□ -2,22
Col17a1Q07563 Gm22301-201ENSMUST00000082656 107 ntBASIC1,19□□□□□ -2,22
Col17a1Q07563 Gm25779-201ENSMUST00000116710 95 ntBASIC1,18□□□□□ -2,22
Col17a1Q07563 Gm23989-201ENSMUST00000117030 66 ntBASIC1,18□□□□□ -2,22
Col17a1Q07563 Gm25296-201ENSMUST00000082566 67 ntBASIC1,18□□□□□ -2,22
Col17a1Q07563 Gm25993-201ENSMUST00000175391 80 ntBASIC1,18□□□□□ -2,22
Col17a1Q07563 Gm16399-201ENSMUST00000181423 219 ntBASIC1,18□□□□□ -2,22
Col17a1Q07563 Snord96a-201ENSMUST00000082791 81 ntBASIC1,18□□□□□ -2,22
Col17a1Q07563 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1,18□□□□□ -2,22
Col17a1Q07563 Gm22074-201ENSMUST00000158595 113 ntBASIC1,17□□□□□ -2,22
Col17a1Q07563 Gm25307-201ENSMUST00000158885 106 ntBASIC1,17□□□□□ -2,22
Col17a1Q07563 Gm22302-201ENSMUST00000082657 106 ntBASIC1,17□□□□□ -2,22
Col17a1Q07563 Mir224-201ENSMUST00000083608 82 ntBASIC1,17□□□□□ -2,22
Col17a1Q07563 Gm22593-201ENSMUST00000104245 109 ntBASIC1,16□□□□□ -2,22
Col17a1Q07563 Gm22520-201ENSMUST00000158269 129 ntBASIC1,16□□□□□ -2,22
Col17a1Q07563 Gm25522-201ENSMUST00000158394 105 ntBASIC1,16□□□□□ -2,22
Col17a1Q07563 Mir23a-201ENSMUST00000083677 75 ntBASIC1,16□□□□□ -2,22
Col17a1Q07563 Gm24808-201ENSMUST00000157993 118 ntBASIC1,15□□□□□ -2,23
Col17a1Q07563 Mir3079-201ENSMUST00000175428 90 ntBASIC1,15□□□□□ -2,23
Col17a1Q07563 Gm23017-201ENSMUST00000177583 72 ntBASIC1,15□□□□□ -2,23
Col17a1Q07563 Gm23853-201ENSMUST00000158375 104 ntBASIC1,14□□□□□ -2,23
Col17a1Q07563 Snora62-201ENSMUST00000082991 149 ntBASIC1,14□□□□□ -2,23
Col17a1Q07563 Gm25128-201ENSMUST00000083339 76 ntBASIC1,14□□□□□ -2,23
Col17a1Q07563 Gm25683-201ENSMUST00000083940 131 ntBASIC1,14□□□□□ -2,23
Col17a1Q07563 Gm24796-201ENSMUST00000104007 107 ntBASIC1,13□□□□□ -2,23
Col17a1Q07563 Gm23494-201ENSMUST00000116830 126 ntBASIC1,13□□□□□ -2,23
Col17a1Q07563 Traj60-201ENSMUST00000167781 54 ntBASIC1,12□□□□□ -2,23
Col17a1Q07563 Gm23416-201ENSMUST00000175520 95 ntBASIC1,12□□□□□ -2,23
Col17a1Q07563 Gm24459-201ENSMUST00000082730 86 ntBASIC1,12□□□□□ -2,23
Col17a1Q07563 Gm25894-201ENSMUST00000083458 75 ntBASIC1,12□□□□□ -2,23
Col17a1Q07563 Gm22542-201ENSMUST00000158166 95 ntBASIC1,12□□□□□ -2,23
Col17a1Q07563 Mir7010-201ENSMUST00000183464 63 ntBASIC1,12□□□□□ -2,23
Col17a1Q07563 AC125190.3-201ENSMUST00000223224 121 ntBASIC1,11□□□□□ -2,23
Col17a1Q07563 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1,1□□□□□ -2,23
Col17a1Q07563 Gm22689-201ENSMUST00000102452 110 ntBASIC1,1□□□□□ -2,23
Col17a1Q07563 Gm25132-201ENSMUST00000082652 107 ntBASIC1,1□□□□□ -2,23
Col17a1Q07563 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,08□□□□□ -2,24
Col17a1Q07563 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,08□□□□□ -2,24
Col17a1Q07563 Gm24321-201ENSMUST00000175348 80 ntBASIC1,08□□□□□ -2,24
Col17a1Q07563 Gm22550-201ENSMUST00000179774 107 ntBASIC1,08□□□□□ -2,24
Col17a1Q07563 Gm44327-201ENSMUST00000200068 117 ntBASIC1,08□□□□□ -2,24
Col17a1Q07563 Gm22060-201ENSMUST00000082558 107 ntBASIC1,08□□□□□ -2,24
Col17a1Q07563 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC1,07□□□□□ -2,24
Col17a1Q07563 Mir1955-201ENSMUST00000158014 98 ntBASIC1,07□□□□□ -2,24
Col17a1Q07563 Gm22757-201ENSMUST00000102279 96 ntBASIC1,06□□□□□ -2,24
Col17a1Q07563 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,06□□□□□ -2,24
Col17a1Q07563 Gm44301-201ENSMUST00000200362 143 ntBASIC1,06□□□□□ -2,24
Col17a1Q07563 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,05□□□□□ -2,24
Col17a1Q07563 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1,05□□□□□ -2,24
Col17a1Q07563 Gm25138-201ENSMUST00000083248 136 ntBASIC1,05□□□□□ -2,24
Col17a1Q07563 Gm22233-201ENSMUST00000157464 114 ntBASIC1,05□□□□□ -2,24
Col17a1Q07563 Gm25868-201ENSMUST00000158253 114 ntBASIC1,05□□□□□ -2,24
Col17a1Q07563 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC1,04□□□□□ -2,24
Col17a1Q07563 Gm22260-201ENSMUST00000178643 107 ntBASIC1,04□□□□□ -2,24
Col17a1Q07563 Gm42845-201ENSMUST00000197766 105 ntBASIC1,04□□□□□ -2,24
Col17a1Q07563 mt-Tw-201ENSMUST00000082397 67 ntBASIC1,04□□□□□ -2,24
Col17a1Q07563 Gm44455-201ENSMUST00000200061 82 ntBASIC1,03□□□□□ -2,24
Col17a1Q07563 Gm22455-201ENSMUST00000082580 71 ntBASIC1,03□□□□□ -2,24
Col17a1Q07563 Snord32a-201ENSMUST00000083285 83 ntBASIC1,03□□□□□ -2,24
Col17a1Q07563 Gm25248-201ENSMUST00000175473 98 ntBASIC1,02□□□□□ -2,25
Col17a1Q07563 Mir125b-1-201ENSMUST00000175613 77 ntBASIC1,02□□□□□ -2,25
Col17a1Q07563 Mir6915-201ENSMUST00000198839 69 ntBASIC1,02□□□□□ -2,25
Col17a1Q07563 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1,02□□□□□ -2,25
Col17a1Q07563 Gm22879-201ENSMUST00000082895 74 ntBASIC1,02□□□□□ -2,25
Col17a1Q07563 Mir15a-201ENSMUST00000175266 84 ntBASIC1,01□□□□□ -2,25
Col17a1Q07563 Gm24651-201ENSMUST00000157107 107 ntBASIC1□□□□□ -2,25
Col17a1Q07563 Gm23173-201ENSMUST00000157161 160 ntBASIC0,99□□□□□ -2,25
Col17a1Q07563 Gm25275-201ENSMUST00000104297 129 ntBASIC0,99□□□□□ -2,25
Col17a1Q07563 n-R5s157-201ENSMUST00000122543 121 ntBASIC0,99□□□□□ -2,25
Col17a1Q07563 Mir3473d-201ENSMUST00000175346 81 ntBASIC0,99□□□□□ -2,25
Col17a1Q07563 Gm27943-201ENSMUST00000184844 116 ntBASIC0,99□□□□□ -2,25
Col17a1Q07563 AC161271.1-201ENSMUST00000226914 150 ntBASIC0,99□□□□□ -2,25
Col17a1Q07563 Gm24431-201ENSMUST00000104073 66 ntBASIC0,98□□□□□ -2,25
Col17a1Q07563 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0,98□□□□□ -2,25
Col17a1Q07563 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0,97□□□□□ -2,25
Col17a1Q07563 Gm26227-201ENSMUST00000082510 101 ntBASIC0,97□□□□□ -2,25
Col17a1Q07563 Gm38113-201ENSMUST00000193704 201 ntBASIC0,96□□□□□ -2,26
Col17a1Q07563 Gm22303-201ENSMUST00000082686 122 ntBASIC0,96□□□□□ -2,26
Col17a1Q07563 Mir200a-201ENSMUST00000083466 90 ntBASIC0,96□□□□□ -2,26
Col17a1Q07563 Gm24278-201ENSMUST00000104239 127 ntBASIC0,94□□□□□ -2,26
Col17a1Q07563 Gm22489-201ENSMUST00000116813 62 ntBASIC0,94□□□□□ -2,26
Col17a1Q07563 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0,92□□□□□ -2,26
Col17a1Q07563 Gm44828-201ENSMUST00000203745 106 ntBASIC0,92□□□□□ -2,26
Col17a1Q07563 Gm22056-201ENSMUST00000083386 81 ntBASIC0,92□□□□□ -2,26
Col17a1Q07563 Snord67-201ENSMUST00000104033 111 ntBASIC0,91□□□□□ -2,26
Col17a1Q07563 Gm24372-201ENSMUST00000104400 110 ntBASIC0,91□□□□□ -2,26
Col17a1Q07563 Gm25772-201ENSMUST00000158574 56 ntBASIC0,91□□□□□ -2,26
Col17a1Q07563 Mir3089-201ENSMUST00000175350 84 ntBASIC0,91□□□□□ -2,26
Col17a1Q07563 Gm26236-201ENSMUST00000175536 137 ntBASIC0,91□□□□□ -2,26
Retrieved 100 of 76,532 protein–RNA pairs in 19,4 ms