Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm25812-201ENSMUST00000082751 103 ntBASIC-0.96□□□□□ -2.56
Nkx3-1P97436 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.96□□□□□ -2.56
Nkx3-1P97436 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.96□□□□□ -2.56
Nkx3-1P97436 Gm25915-201ENSMUST00000104265 126 ntBASIC-0.97□□□□□ -2.56
Nkx3-1P97436 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.97□□□□□ -2.56
Nkx3-1P97436 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.97□□□□□ -2.56
Nkx3-1P97436 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.97□□□□□ -2.56
Nkx3-1P97436 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.97□□□□□ -2.56
Nkx3-1P97436 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.97□□□□□ -2.56
Nkx3-1P97436 Gm24099-201ENSMUST00000083384 107 ntBASIC-0.97□□□□□ -2.56
Nkx3-1P97436 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.98□□□□□ -2.57
Nkx3-1P97436 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.98□□□□□ -2.57
Nkx3-1P97436 Gm25920-201ENSMUST00000158307 99 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25098-201ENSMUST00000177580 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm23356-201ENSMUST00000177610 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24027-201ENSMUST00000177611 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22511-201ENSMUST00000177628 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22630-201ENSMUST00000177781 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm23560-201ENSMUST00000177782 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25462-201ENSMUST00000177833 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm26059-201ENSMUST00000177865 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22255-201ENSMUST00000177933 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25146-201ENSMUST00000177976 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25523-201ENSMUST00000178044 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24926-201ENSMUST00000178053 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24585-201ENSMUST00000178104 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22627-201ENSMUST00000178127 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22912-201ENSMUST00000178242 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22632-201ENSMUST00000178266 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24866-201ENSMUST00000178338 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22524-201ENSMUST00000178357 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25710-201ENSMUST00000178367 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm23575-201ENSMUST00000178406 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24872-201ENSMUST00000178434 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22449-201ENSMUST00000178924 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24702-201ENSMUST00000178965 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24206-201ENSMUST00000179011 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24528-201ENSMUST00000179164 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm22909-201ENSMUST00000179190 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm26334-201ENSMUST00000179403 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25463-201ENSMUST00000179405 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25742-201ENSMUST00000179530 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25209-201ENSMUST00000179576 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm26392-201ENSMUST00000179661 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25230-201ENSMUST00000179740 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm26434-201ENSMUST00000179778 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm25741-201ENSMUST00000179825 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24759-201ENSMUST00000179827 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24219-201ENSMUST00000179861 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm26454-201ENSMUST00000082682 107 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm23254-201ENSMUST00000097244 79 ntBASIC-0.99□□□□□ -2.57
Nkx3-1P97436 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1□□□□□ -2.57
Nkx3-1P97436 Gm25753-201ENSMUST00000116792 121 ntBASIC-1□□□□□ -2.57
Nkx3-1P97436 Gm24400-201ENSMUST00000157865 107 ntBASIC-1□□□□□ -2.57
Nkx3-1P97436 Mir7086-201ENSMUST00000183683 65 ntBASIC-1□□□□□ -2.57
Nkx3-1P97436 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1□□□□□ -2.57
Nkx3-1P97436 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.01□□□□□ -2.57
Nkx3-1P97436 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.01□□□□□ -2.57
Nkx3-1P97436 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.01□□□□□ -2.57
Nkx3-1P97436 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.01□□□□□ -2.57
Nkx3-1P97436 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.01□□□□□ -2.57
Nkx3-1P97436 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.01□□□□□ -2.57
Nkx3-1P97436 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.01□□□□□ -2.57
Nkx3-1P97436 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.02□□□□□ -2.57
Nkx3-1P97436 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.02□□□□□ -2.57
Nkx3-1P97436 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.02□□□□□ -2.57
Nkx3-1P97436 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.02□□□□□ -2.57
Nkx3-1P97436 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.02□□□□□ -2.57
Nkx3-1P97436 Snora2b-201ENSMUST00000084005 137 ntBASIC-1.02□□□□□ -2.57
Nkx3-1P97436 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.03□□□□□ -2.57
Nkx3-1P97436 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.03□□□□□ -2.57
Nkx3-1P97436 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.03□□□□□ -2.57
Nkx3-1P97436 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.03□□□□□ -2.57
Nkx3-1P97436 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.04□□□□□ -2.58
Nkx3-1P97436 Gm24676-201ENSMUST00000158758 75 ntBASIC-1.04□□□□□ -2.58
Nkx3-1P97436 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.04□□□□□ -2.58
Nkx3-1P97436 Mir6481-201ENSMUST00000184617 110 ntBASIC-1.04□□□□□ -2.58
Nkx3-1P97436 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.05□□□□□ -2.58
Nkx3-1P97436 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
Nkx3-1P97436 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
Nkx3-1P97436 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
Nkx3-1P97436 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
Nkx3-1P97436 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.05□□□□□ -2.58
Nkx3-1P97436 Gm23138-201ENSMUST00000083365 103 ntBASIC-1.05□□□□□ -2.58
Nkx3-1P97436 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.05□□□□□ -2.58
Nkx3-1P97436 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.06□□□□□ -2.58
Nkx3-1P97436 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.07□□□□□ -2.58
Nkx3-1P97436 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.07□□□□□ -2.58
Nkx3-1P97436 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.07□□□□□ -2.58
Nkx3-1P97436 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.08□□□□□ -2.58
Nkx3-1P97436 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.08□□□□□ -2.58
Nkx3-1P97436 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.08□□□□□ -2.58
Nkx3-1P97436 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.08□□□□□ -2.58
Nkx3-1P97436 Gm25089-201ENSMUST00000102015 79 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms