Protein–RNA interactions for Protein: P17095
Hmga1, High mobility group protein HMG-I/HMG-Y, mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Hmga1 | P17095 | Mir1a-2-201 | ENSMUST00000198520 | 72 nt | BASIC | -4,51 | □□□□□ -3,13 | | |
Hmga1 | P17095 | Gm44922-201 | ENSMUST00000206690 | 90 nt | BASIC | -4,51 | □□□□□ -3,13 | | |
Hmga1 | P17095 | Gm23841-201 | ENSMUST00000116951 | 114 nt | BASIC | -4,52 | □□□□□ -3,13 | | |
Hmga1 | P17095 | Gm23992-201 | ENSMUST00000174981 | 67 nt | BASIC | -4,52 | □□□□□ -3,13 | | |
Hmga1 | P17095 | AC154245.1-201 | ENSMUST00000224615 | 601 nt | BASIC | -4,52 | □□□□□ -3,13 | | |
Hmga1 | P17095 | Gm23378-201 | ENSMUST00000082942 | 107 nt | BASIC | -4,52 | □□□□□ -3,13 | | |
Hmga1 | P17095 | AC166341.3-201 | ENSMUST00000221861 | 114 nt | BASIC | -4,53 | □□□□□ -3,13 | | |
Hmga1 | P17095 | Gm24947-201 | ENSMUST00000158334 | 110 nt | BASIC | -4,54 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm27686-201 | ENSMUST00000185123 | 91 nt | BASIC | -4,54 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm25111-201 | ENSMUST00000116686 | 147 nt | BASIC | -4,55 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm24150-201 | ENSMUST00000082759 | 104 nt | BASIC | -4,55 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm23315-201 | ENSMUST00000158003 | 109 nt | BASIC | -4,58 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm23337-201 | ENSMUST00000158959 | 118 nt | BASIC | -4,58 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm45002-201 | ENSMUST00000208045 | 120 nt | BASIC | -4,58 | □□□□□ -3,14 | | |
Hmga1 | P17095 | AC154296.2-201 | ENSMUST00000214696 | 545 nt | BASIC | -4,58 | □□□□□ -3,14 | | |
Hmga1 | P17095 | AC165138.1-201 | ENSMUST00000226984 | 270 nt | BASIC | -4,58 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm22364-201 | ENSMUST00000083097 | 98 nt | BASIC | -4,58 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm22139-201 | ENSMUST00000158747 | 105 nt | BASIC | -4,59 | □□□□□ -3,14 | | |
Hmga1 | P17095 | Gm26491-201 | ENSMUST00000179268 | 121 nt | BASIC | -4,6 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm37404-201 | ENSMUST00000195726 | 359 nt | BASIC | -4,6 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Mir181a-2-201 | ENSMUST00000083489 | 76 nt | BASIC | -4,6 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Mir669b-201 | ENSMUST00000102172 | 97 nt | BASIC | -4,61 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Snord80-202 | ENSMUST00000199023 | 77 nt | BASIC | -4,61 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm22032-201 | ENSMUST00000116946 | 116 nt | BASIC | -4,62 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm25654-201 | ENSMUST00000158467 | 88 nt | BASIC | -4,62 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm23047-201 | ENSMUST00000177661 | 94 nt | BASIC | -4,62 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm22373-201 | ENSMUST00000104584 | 89 nt | BASIC | -4,63 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm44481-201 | ENSMUST00000197288 | 84 nt | BASIC | -4,63 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm20108-201 | ENSMUST00000219977 | 153 nt | BASIC | -4,63 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm23573-201 | ENSMUST00000104408 | 107 nt | BASIC | -4,64 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm24132-201 | ENSMUST00000104745 | 91 nt | BASIC | -4,64 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm26109-201 | ENSMUST00000083970 | 70 nt | BASIC | -4,64 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm23003-201 | ENSMUST00000179948 | 107 nt | BASIC | -4,65 | □□□□□ -3,15 | | |
Hmga1 | P17095 | Gm43206-201 | ENSMUST00000197990 | 114 nt | BASIC | -4,65 | □□□□□ -3,15 | | |
Hmga1 | P17095 | AL606472.1-201 | ENSMUST00000224628 | 275 nt | BASIC | -4,65 | □□□□□ -3,15 | | |
Hmga1 | P17095 | AC140930.2-201 | ENSMUST00000221803 | 109 nt | BASIC | -4,66 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm24054-201 | ENSMUST00000158619 | 105 nt | BASIC | -4,67 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm22413-201 | ENSMUST00000175465 | 85 nt | BASIC | -4,67 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm25316-201 | ENSMUST00000116826 | 118 nt | BASIC | -4,68 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm25087-201 | ENSMUST00000101992 | 78 nt | BASIC | -4,69 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm25609-201 | ENSMUST00000104019 | 104 nt | BASIC | -4,69 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm24737-201 | ENSMUST00000158861 | 100 nt | BASIC | -4,69 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm26467-201 | ENSMUST00000097257 | 78 nt | BASIC | -4,69 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm25326-201 | ENSMUST00000101903 | 107 nt | BASIC | -4,7 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Gm24946-201 | ENSMUST00000158332 | 106 nt | BASIC | -4,71 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Vmn2r-ps50-201 | ENSMUST00000209317 | 120 nt | BASIC | -4,71 | □□□□□ -3,16 | | |
Hmga1 | P17095 | Snord72-201 | ENSMUST00000104549 | 81 nt | BASIC | -4,72 | □□□□□ -3,17 | | |
Hmga1 | P17095 | Gm25779-201 | ENSMUST00000116710 | 95 nt | BASIC | -4,73 | □□□□□ -3,17 | | |
Hmga1 | P17095 | Gm23545-201 | ENSMUST00000158205 | 104 nt | BASIC | -4,73 | □□□□□ -3,17 | | |
Hmga1 | P17095 | Gm24183-201 | ENSMUST00000122572 | 93 nt | BASIC | -4,74 | □□□□□ -3,17 | | |
Hmga1 | P17095 | AC167192.1-201 | ENSMUST00000225908 | 139 nt | BASIC | -4,75 | □□□□□ -3,17 | | |
Hmga1 | P17095 | CT030170.1-201 | ENSMUST00000222183 | 148 nt | BASIC | -4,76 | □□□□□ -3,17 | | |
Hmga1 | P17095 | Gm24842-201 | ENSMUST00000158681 | 54 nt | BASIC | -4,77 | □□□□□ -3,17 | | |
Hmga1 | P17095 | Gm26097-201 | ENSMUST00000179642 | 93 nt | BASIC | -4,77 | □□□□□ -3,17 | | |
Hmga1 | P17095 | Gm25867-201 | ENSMUST00000158254 | 103 nt | BASIC | -4,78 | □□□□□ -3,17 | | |
Hmga1 | P17095 | Gm26337-201 | ENSMUST00000178000 | 79 nt | BASIC | -4,79 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm25390-201 | ENSMUST00000157341 | 103 nt | BASIC | -4,81 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm26008-201 | ENSMUST00000158797 | 99 nt | BASIC | -4,81 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm25696-201 | ENSMUST00000082900 | 105 nt | BASIC | -4,82 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm23141-201 | ENSMUST00000178682 | 94 nt | BASIC | -4,83 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm11042-201 | ENSMUST00000110441 | 120 nt | APPRIS P1 TSL 5 BASIC | -4,84 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm26156-201 | ENSMUST00000116999 | 123 nt | BASIC | -4,84 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm24650-201 | ENSMUST00000157105 | 103 nt | BASIC | -4,84 | □□□□□ -3,18 | | |
Hmga1 | P17095 | Gm25834-201 | ENSMUST00000158916 | 101 nt | BASIC | -4,84 | □□□□□ -3,18 | | |
Hmga1 | P17095 | mt-Ti-201 | ENSMUST00000082393 | 69 nt | BASIC | -4,85 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm22205-201 | ENSMUST00000122655 | 71 nt | BASIC | -4,86 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm25623-201 | ENSMUST00000157216 | 108 nt | BASIC | -4,86 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Mir664-201 | ENSMUST00000196796 | 69 nt | BASIC | -4,86 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm25681-201 | ENSMUST00000083938 | 106 nt | BASIC | -4,86 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm13059-201 | ENSMUST00000119881 | 398 nt | BASIC | -4,87 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm27579-201 | ENSMUST00000158113 | 63 nt | BASIC | -4,87 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm23210-201 | ENSMUST00000158668 | 98 nt | BASIC | -4,87 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm25978-201 | ENSMUST00000158698 | 90 nt | BASIC | -4,87 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Olfr1108-ps1-201 | ENSMUST00000216930 | 121 nt | BASIC | -4,87 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Mir15b-201 | ENSMUST00000083646 | 64 nt | BASIC | -4,87 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Snord64-201 | ENSMUST00000104003 | 67 nt | BASIC | -4,88 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm22672-201 | ENSMUST00000104414 | 134 nt | BASIC | -4,88 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Mir466f-3-201 | ENSMUST00000104788 | 94 nt | BASIC | -4,88 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Mir466f-2-201 | ENSMUST00000104805 | 94 nt | BASIC | -4,88 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm23988-201 | ENSMUST00000117034 | 122 nt | BASIC | -4,89 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm26468-201 | ENSMUST00000158644 | 106 nt | BASIC | -4,89 | □□□□□ -3,19 | | |
Hmga1 | P17095 | Gm23581-201 | ENSMUST00000158531 | 63 nt | BASIC | -4,91 | □□□□□ -3,2 | | |
Hmga1 | P17095 | Gm22746-201 | ENSMUST00000082494 | 107 nt | BASIC | -4,91 | □□□□□ -3,2 | | |
Hmga1 | P17095 | Gm22699-201 | ENSMUST00000175376 | 105 nt | BASIC | -4,92 | □□□□□ -3,2 | | |
Hmga1 | P17095 | Mir876-201 | ENSMUST00000104659 | 81 nt | BASIC | -4,94 | □□□□□ -3,2 | | |
Hmga1 | P17095 | Gm25773-201 | ENSMUST00000116718 | 127 nt | BASIC | -4,94 | □□□□□ -3,2 | | |
Hmga1 | P17095 | Gm24393-201 | ENSMUST00000158135 | 97 nt | BASIC | -4,94 | □□□□□ -3,2 | | |
Hmga1 | P17095 | AC158537.2-201 | ENSMUST00000223575 | 150 nt | BASIC | -4,94 | □□□□□ -3,2 | | |
Hmga1 | P17095 | Gm28438-201 | ENSMUST00000188299 | 345 nt | BASIC | -4,97 | □□□□□ -3,21 | | |
Hmga1 | P17095 | mt-Nd3-201 | ENSMUST00000082411 | 348 nt | APPRIS P1 BASIC | -4,97 | □□□□□ -3,21 | | |
Hmga1 | P17095 | AL935138.1-201 | ENSMUST00000215309 | 196 nt | BASIC | -4,98 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Gm27905-201 | ENSMUST00000184005 | 207 nt | BASIC | -4,99 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Trgj1-201 | ENSMUST00000200495 | 60 nt | APPRIS P1 BASIC | -4,99 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir466b-2-201 | ENSMUST00000103778 | 82 nt | BASIC | -5 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Gm25061-201 | ENSMUST00000104665 | 107 nt | BASIC | -5 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Gm10563-201 | ENSMUST00000115821 | 237 nt | APPRIS P1 TSL 5 BASIC | -5 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Gm25322-201 | ENSMUST00000122556 | 104 nt | BASIC | -5,01 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-7-201 | ENSMUST00000180364 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-6-201 | ENSMUST00000196127 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Hmga1 | P17095 | Mir669a-12-201 | ENSMUST00000197274 | 87 nt | BASIC | -5,02 | □□□□□ -3,21 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 108,6 ms