Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm45655-201ENSMUST00000211625 160 ntBASIC0.12□□□□□ -2.39
Col4a4Q9QZR9 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.12□□□□□ -2.39
Col4a4Q9QZR9 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm14533-201ENSMUST00000117088 93 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm25619-201ENSMUST00000122621 104 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm24384-201ENSMUST00000122693 75 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm25656-201ENSMUST00000158466 66 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm28001-201ENSMUST00000183561 117 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm44803-201ENSMUST00000204384 156 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm25798-201ENSMUST00000082641 107 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Mir487b-201ENSMUST00000102265 82 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm25756-201ENSMUST00000103990 136 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm25055-201ENSMUST00000157369 76 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm22203-201ENSMUST00000158605 58 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm42845-201ENSMUST00000197766 105 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm6607-201ENSMUST00000215035 328 ntBASIC0.11□□□□□ -2.39
Col4a4Q9QZR9 Gm25847-201ENSMUST00000116793 96 ntBASIC0.1□□□□□ -2.39
Col4a4Q9QZR9 Gm25289-201ENSMUST00000122799 119 ntBASIC0.1□□□□□ -2.39
Col4a4Q9QZR9 Gm25622-201ENSMUST00000157217 104 ntBASIC0.1□□□□□ -2.39
Col4a4Q9QZR9 Gm22429-201ENSMUST00000158553 130 ntBASIC0.1□□□□□ -2.39
Col4a4Q9QZR9 Gm22454-201ENSMUST00000082583 107 ntBASIC0.1□□□□□ -2.39
Col4a4Q9QZR9 Gm22729-201ENSMUST00000158088 129 ntBASIC0.09□□□□□ -2.39
Col4a4Q9QZR9 Gm24637-201ENSMUST00000158674 85 ntBASIC0.09□□□□□ -2.39
Col4a4Q9QZR9 Gm26441-201ENSMUST00000082590 104 ntBASIC0.09□□□□□ -2.39
Col4a4Q9QZR9 Gm26438-201ENSMUST00000082593 107 ntBASIC0.09□□□□□ -2.39
Col4a4Q9QZR9 Gm22368-201ENSMUST00000102416 109 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm24833-201ENSMUST00000116775 120 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm23261-201ENSMUST00000158316 136 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm27975-201ENSMUST00000184400 101 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm24580-201ENSMUST00000103965 131 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm22539-201ENSMUST00000158167 117 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm23821-201ENSMUST00000158738 106 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm26007-201ENSMUST00000158798 120 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Gm24134-201ENSMUST00000083361 71 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Mir18-201ENSMUST00000083469 96 ntBASIC0.08□□□□□ -2.4
Col4a4Q9QZR9 Mir741-201ENSMUST00000103931 71 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm23335-201ENSMUST00000117021 90 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm26253-201ENSMUST00000122493 103 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm14947-201ENSMUST00000133704 303 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm22845-201ENSMUST00000157712 104 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm22605-201ENSMUST00000158289 108 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm22234-201ENSMUST00000174906 65 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm25328-201ENSMUST00000175013 107 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm25641-201ENSMUST00000175135 108 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm25952-201ENSMUST00000175329 74 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Mir5117-201ENSMUST00000083226 84 ntBASIC0.07□□□□□ -2.4
Col4a4Q9QZR9 Gm24064-201ENSMUST00000157486 106 ntBASIC0.06□□□□□ -2.4
Col4a4Q9QZR9 Gm22087-201ENSMUST00000158339 88 ntBASIC0.06□□□□□ -2.4
Col4a4Q9QZR9 Gm22413-201ENSMUST00000175465 85 ntBASIC0.06□□□□□ -2.4
Col4a4Q9QZR9 Mir214-201ENSMUST00000083582 110 ntBASIC0.06□□□□□ -2.4
Col4a4Q9QZR9 Snord67-201ENSMUST00000104033 111 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm23468-201ENSMUST00000157125 108 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm25964-201ENSMUST00000157171 97 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm23690-201ENSMUST00000083036 94 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Mir672-201ENSMUST00000102331 100 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm25112-201ENSMUST00000122680 104 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm25440-201ENSMUST00000158279 154 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm25522-201ENSMUST00000158394 105 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Mir1950-201ENSMUST00000158526 74 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm22327-201ENSMUST00000158899 108 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Snord50a-201ENSMUST00000178154 72 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm24463-201ENSMUST00000178417 72 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Mir7673-201ENSMUST00000184567 64 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Snora16a-202ENSMUST00000196061 137 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm44932-201ENSMUST00000206799 121 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Snora62-201ENSMUST00000082991 149 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Snord85-201ENSMUST00000083262 73 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Mir382-201ENSMUST00000083494 76 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm23038-201ENSMUST00000083873 104 ntBASIC0.05□□□□□ -2.4
Col4a4Q9QZR9 Gm25993-201ENSMUST00000175391 80 ntBASIC0.04□□□□□ -2.4
Col4a4Q9QZR9 Snora26-201ENSMUST00000175614 121 ntBASIC0.04□□□□□ -2.4
Col4a4Q9QZR9 Gm38208-201ENSMUST00000192476 114 ntBASIC0.04□□□□□ -2.4
Col4a4Q9QZR9 Gm22251-201ENSMUST00000083216 107 ntBASIC0.04□□□□□ -2.4
Col4a4Q9QZR9 CT571266.1-201ENSMUST00000222859 153 ntBASIC0.03□□□□□ -2.4
Col4a4Q9QZR9 Mir3071-201ENSMUST00000093621 80 ntBASIC0.03□□□□□ -2.4
Col4a4Q9QZR9 Gm22805-201ENSMUST00000082739 107 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Mir145a-201ENSMUST00000083658 70 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm23715-201ENSMUST00000157354 106 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm24843-201ENSMUST00000158682 76 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm26359-201ENSMUST00000158873 101 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm25854-201ENSMUST00000082792 72 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm25791-201ENSMUST00000083292 137 ntBASIC0.02□□□□□ -2.41
Col4a4Q9QZR9 Gm24199-201ENSMUST00000157808 136 ntBASIC0.01□□□□□ -2.41
Col4a4Q9QZR9 Gm45617-201ENSMUST00000211132 209 ntBASIC0.01□□□□□ -2.41
Col4a4Q9QZR9 Gm25296-201ENSMUST00000082566 67 ntBASIC0.01□□□□□ -2.41
Col4a4Q9QZR9 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
Col4a4Q9QZR9 Gm11333-201ENSMUST00000119479 148 ntBASIC0□□□□□ -2.41
Col4a4Q9QZR9 Mir7651-201ENSMUST00000184154 64 ntBASIC0□□□□□ -2.41
Col4a4Q9QZR9 Gm22458-201ENSMUST00000082576 107 ntBASIC0□□□□□ -2.41
Col4a4Q9QZR9 Gm24918-201ENSMUST00000083022 130 ntBASIC0□□□□□ -2.41
Col4a4Q9QZR9 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.01□□□□□ -2.41
Col4a4Q9QZR9 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.01□□□□□ -2.41
Col4a4Q9QZR9 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 160.4 ms