Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm24988-201ENSMUST00000104460 121 ntBASIC0.53□□□□□ -2.32
Ushbp1Q8R370 Gm24203-201ENSMUST00000082949 114 ntBASIC0.53□□□□□ -2.32
Ushbp1Q8R370 Gm22033-201ENSMUST00000116947 90 ntBASIC0.52□□□□□ -2.33
Ushbp1Q8R370 Gm25993-201ENSMUST00000175391 80 ntBASIC0.52□□□□□ -2.33
Ushbp1Q8R370 Gm27549-201ENSMUST00000183508 62 ntBASIC0.52□□□□□ -2.33
Ushbp1Q8R370 Gm27977-201ENSMUST00000185159 111 ntBASIC0.52□□□□□ -2.33
Ushbp1Q8R370 Gm24134-201ENSMUST00000083361 71 ntBASIC0.52□□□□□ -2.33
Ushbp1Q8R370 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Gm25609-201ENSMUST00000104019 104 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Gm25382-201ENSMUST00000157811 97 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Gm22539-201ENSMUST00000158167 117 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Gm27987-201ENSMUST00000184023 93 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Gm43432-201ENSMUST00000196352 121 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Gm42677-201ENSMUST00000196363 127 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.51□□□□□ -2.33
Ushbp1Q8R370 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Mir126a-201ENSMUST00000083606 73 ntBASIC0.51□□□□□ -2.33
Ushbp1Q8R370 Mir670-201ENSMUST00000102380 100 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Gm24593-201ENSMUST00000122507 106 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Gm22720-201ENSMUST00000122710 87 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Gm23036-201ENSMUST00000157885 99 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Gm22542-201ENSMUST00000158166 95 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Gm26007-201ENSMUST00000158798 120 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Gm26499-201ENSMUST00000178544 79 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Gm26096-201ENSMUST00000179084 79 ntBASIC0.5□□□□□ -2.33
Ushbp1Q8R370 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.5□□□□□ -2.33
Ushbp1Q8R370 Mir741-201ENSMUST00000103931 71 ntBASIC0.49□□□□□ -2.33
Ushbp1Q8R370 Gm25307-201ENSMUST00000158885 106 ntBASIC0.49□□□□□ -2.33
Ushbp1Q8R370 Gm44828-201ENSMUST00000203745 106 ntBASIC0.49□□□□□ -2.33
Ushbp1Q8R370 Gm23749-201ENSMUST00000104223 131 ntBASIC0.48□□□□□ -2.33
Ushbp1Q8R370 Gm24064-201ENSMUST00000157486 106 ntBASIC0.48□□□□□ -2.33
Ushbp1Q8R370 Gm22983-201ENSMUST00000158308 104 ntBASIC0.48□□□□□ -2.33
Ushbp1Q8R370 Gm22413-201ENSMUST00000175465 85 ntBASIC0.48□□□□□ -2.33
Ushbp1Q8R370 Gm44345-201ENSMUST00000199560 135 ntBASIC0.48□□□□□ -2.33
Ushbp1Q8R370 Gm45655-201ENSMUST00000211625 160 ntBASIC0.48□□□□□ -2.33
Ushbp1Q8R370 AC122335.1-201ENSMUST00000217587 175 ntBASIC0.48□□□□□ -2.33
Ushbp1Q8R370 Mir466l-201ENSMUST00000104866 121 ntBASIC0.47□□□□□ -2.33
Ushbp1Q8R370 Mir7065-201ENSMUST00000185110 61 ntBASIC0.47□□□□□ -2.33
Ushbp1Q8R370 Gm25296-201ENSMUST00000082566 67 ntBASIC0.47□□□□□ -2.33
Ushbp1Q8R370 Mir1187-201ENSMUST00000116936 122 ntBASIC0.46□□□□□ -2.34
Ushbp1Q8R370 Mir3089-201ENSMUST00000175350 84 ntBASIC0.46□□□□□ -2.34
Ushbp1Q8R370 Gm44803-201ENSMUST00000204384 156 ntBASIC0.46□□□□□ -2.34
Ushbp1Q8R370 Gm22981-201ENSMUST00000082611 75 ntBASIC0.46□□□□□ -2.34
Ushbp1Q8R370 Mir18-201ENSMUST00000083469 96 ntBASIC0.46□□□□□ -2.34
Ushbp1Q8R370 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Ushbp1Q8R370 Gm23306-201ENSMUST00000179058 105 ntBASIC0.45□□□□□ -2.34
Ushbp1Q8R370 Gm24884-201ENSMUST00000158784 119 ntBASIC0.44□□□□□ -2.34
Ushbp1Q8R370 Gm22759-201ENSMUST00000102276 96 ntBASIC0.43□□□□□ -2.34
Ushbp1Q8R370 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC0.43□□□□□ -2.34
Ushbp1Q8R370 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.43□□□□□ -2.34
Ushbp1Q8R370 Gm6293-201ENSMUST00000050339 195 ntBASIC0.43□□□□□ -2.34
Ushbp1Q8R370 Gm23969-201ENSMUST00000083324 74 ntBASIC0.43□□□□□ -2.34
Ushbp1Q8R370 Gm26116-201ENSMUST00000175600 77 ntBASIC0.42□□□□□ -2.34
Ushbp1Q8R370 Mir7673-201ENSMUST00000184567 64 ntBASIC0.42□□□□□ -2.34
Ushbp1Q8R370 Mir710-201ENSMUST00000102088 110 ntBASIC0.41□□□□□ -2.34
Ushbp1Q8R370 Gm26303-201ENSMUST00000116845 119 ntBASIC0.41□□□□□ -2.34
Ushbp1Q8R370 Gm23570-201ENSMUST00000083029 104 ntBASIC0.4□□□□□ -2.35
Ushbp1Q8R370 Mir363-201ENSMUST00000093598 75 ntBASIC0.4□□□□□ -2.35
Ushbp1Q8R370 Gm27475-201ENSMUST00000183420 61 ntBASIC0.39□□□□□ -2.35
Ushbp1Q8R370 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.39□□□□□ -2.35
Ushbp1Q8R370 Gm25108-201ENSMUST00000122473 78 ntBASIC0.38□□□□□ -2.35
Ushbp1Q8R370 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.38□□□□□ -2.35
Ushbp1Q8R370 Gm11333-201ENSMUST00000119479 148 ntBASIC0.37□□□□□ -2.35
Ushbp1Q8R370 Scarna8-201ENSMUST00000158333 131 ntBASIC0.37□□□□□ -2.35
Ushbp1Q8R370 Gm24495-201ENSMUST00000178575 79 ntBASIC0.37□□□□□ -2.35
Ushbp1Q8R370 Gm22253-201ENSMUST00000179870 79 ntBASIC0.37□□□□□ -2.35
Ushbp1Q8R370 Gm27937-201ENSMUST00000183605 88 ntBASIC0.36□□□□□ -2.35
Ushbp1Q8R370 Gm28001-201ENSMUST00000183561 117 ntBASIC0.34□□□□□ -2.36
Ushbp1Q8R370 Gm22459-201ENSMUST00000082577 108 ntBASIC0.34□□□□□ -2.36
Ushbp1Q8R370 Mir3071-201ENSMUST00000093621 80 ntBASIC0.34□□□□□ -2.36
Ushbp1Q8R370 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Ushbp1Q8R370 Gm22962-201ENSMUST00000157962 73 ntBASIC0.33□□□□□ -2.36
Ushbp1Q8R370 Mir3065-201ENSMUST00000198674 87 ntBASIC0.33□□□□□ -2.36
Ushbp1Q8R370 Gm22455-201ENSMUST00000082580 71 ntBASIC0.33□□□□□ -2.36
Ushbp1Q8R370 Snord67-201ENSMUST00000104033 111 ntBASIC0.32□□□□□ -2.36
Ushbp1Q8R370 Gm25045-201ENSMUST00000122670 99 ntBASIC0.32□□□□□ -2.36
Ushbp1Q8R370 Gm23376-201ENSMUST00000082938 160 ntBASIC0.32□□□□□ -2.36
Ushbp1Q8R370 Gm24833-201ENSMUST00000116775 120 ntBASIC0.31□□□□□ -2.36
Ushbp1Q8R370 Gm27415-201ENSMUST00000183720 95 ntBASIC0.3□□□□□ -2.36
Ushbp1Q8R370 Gm27554-201ENSMUST00000185074 98 ntBASIC0.3□□□□□ -2.36
Ushbp1Q8R370 Gm23293-201ENSMUST00000082552 104 ntBASIC0.3□□□□□ -2.36
Ushbp1Q8R370 Gm22071-201ENSMUST00000116857 83 ntBASIC0.29□□□□□ -2.36
Ushbp1Q8R370 Gm25772-201ENSMUST00000158574 56 ntBASIC0.29□□□□□ -2.36
Ushbp1Q8R370 Gm25641-201ENSMUST00000175135 108 ntBASIC0.29□□□□□ -2.36
Ushbp1Q8R370 Gm37750-201ENSMUST00000193563 129 ntBASIC0.29□□□□□ -2.36
Ushbp1Q8R370 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Ushbp1Q8R370 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Ushbp1Q8R370 Gm25275-201ENSMUST00000104297 129 ntBASIC0.28□□□□□ -2.36
Ushbp1Q8R370 Gm25010-201ENSMUST00000158403 65 ntBASIC0.27□□□□□ -2.37
Ushbp1Q8R370 Gm23821-201ENSMUST00000158738 106 ntBASIC0.27□□□□□ -2.37
Ushbp1Q8R370 Gm23056-201ENSMUST00000082803 111 ntBASIC0.27□□□□□ -2.37
Ushbp1Q8R370 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Ushbp1Q8R370 Gm45688-201ENSMUST00000210002 101 ntBASIC0.26□□□□□ -2.37
Ushbp1Q8R370 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.26□□□□□ -2.37
Ushbp1Q8R370 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Ushbp1Q8R370 Mir3064-201ENSMUST00000175532 67 ntBASIC0.25□□□□□ -2.37
Ushbp1Q8R370 Gm45617-201ENSMUST00000211132 209 ntBASIC0.25□□□□□ -2.37
Ushbp1Q8R370 Gm24903-201ENSMUST00000158131 126 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 237.9 ms